RNA–Protein interactions for RNA: ENST00000541005.1

LTBR-208, Transcript of lymphotoxin beta receptor, humanhuman

TSL 2

Gene LTBR, Length 583 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTBR-208ENST00000541005 TOP6BLQ8N6T0 577 aa14.1□□□□□ -0.15
LTBR-208ENST00000541005 TMC2Q8TDI7 906 aa14.1□□□□□ -0.15
LTBR-208ENST00000541005 ACSF2Q96CM8 615 aaPredicted RBP14.1□□□□□ -0.15
LTBR-208ENST00000541005 HPDLQ96IR7 371 aa14.1□□□□□ -0.15
LTBR-208ENST00000541005 C1QTNF1Q9BXJ1 281 aa14.1□□□□□ -0.15
LTBR-208ENST00000541005 EPHX3Q9H6B9 360 aa14.1□□□□□ -0.15
LTBR-208ENST00000541005 CYP4F11Q9HBI6 524 aa14.1□□□□□ -0.15
LTBR-208ENST00000541005 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP14.1□□□□□ -0.15
LTBR-208ENST00000541005 EPS15L1Q9UBC2 864 aa14.1□□□□□ -0.15
LTBR-208ENST00000541005 L1RE1Q9UN81 338 aa14.1□□□□□ -0.15
LTBR-208ENST00000541005 MAPK8IP1Q9UQF2 711 aa14.1□□□□□ -0.15
LTBR-208ENST00000541005 FRMD4BQ9Y2L6 1034 aa14.1□□□□□ -0.15
LTBR-208ENST00000541005 MTMR11A4FU01 709 aa14.09□□□□□ -0.15
LTBR-208ENST00000541005 LRRIQ3A6PVS8 624 aaPredicted RBP14.09□□□□□ -0.15
LTBR-208ENST00000541005 HUS1O60921 280 aa14.09□□□□□ -0.15
LTBR-208ENST00000541005 OR4Q2P0C623 313 aa14.09□□□□□ -0.15
LTBR-208ENST00000541005 RPL13P26373 211 aaKnown RBP14.09□□□□□ -0.15
LTBR-208ENST00000541005 SMARCB1Q12824 385 aa14.09□□□□□ -0.15
LTBR-208ENST00000541005 PTPN21Q16825 1174 aa14.09□□□□□ -0.15
LTBR-208ENST00000541005 DPH6Q7L8W6 267 aa14.09□□□□□ -0.15
LTBR-208ENST00000541005 SMYD4Q8IYR2 804 aaPredicted RBP14.09□□□□□ -0.15
LTBR-208ENST00000541005 THEM5Q8N1Q8 247 aa14.09□□□□□ -0.15
LTBR-208ENST00000541005 C2orf15Q8WU43 125 aaKnown RBP14.09□□□□□ -0.15
LTBR-208ENST00000541005 ZNF516Q92618 1163 aa14.09□□□□□ -0.15
LTBR-208ENST00000541005 VRTNQ9H8Y1 702 aa14.09□□□□□ -0.15
LTBR-208ENST00000541005 ZFP37Q9Y6Q3 630 aaPredicted RBP14.09□□□□□ -0.15
LTBR-208ENST00000541005 KMT2EQ8IZD2 1858 aa14.08□□□□□ -0.16
LTBR-208ENST00000541005 GABRDO14764 452 aa14.08□□□□□ -0.16
LTBR-208ENST00000541005 IKBKBO14920 756 aa14.08□□□□□ -0.16
LTBR-208ENST00000541005 LRG1P02750 347 aa14.08□□□□□ -0.16
LTBR-208ENST00000541005 FSHRP23945 695 aa14.08□□□□□ -0.16
LTBR-208ENST00000541005 ATICP31939 592 aa14.08□□□□□ -0.16
LTBR-208ENST00000541005 PRCPP42785 496 aa14.08□□□□□ -0.16
LTBR-208ENST00000541005 PLD1Q13393 1074 aa14.08□□□□□ -0.16
LTBR-208ENST00000541005 SOWAHAQ2M3V2 549 aa14.08□□□□□ -0.16
LTBR-208ENST00000541005 TDRD10Q5VZ19 366 aaKnown RBP14.08□□□□□ -0.16
LTBR-208ENST00000541005 CENPPQ6IPU0 288 aa14.08□□□□□ -0.16
LTBR-208ENST00000541005 GRASPQ7Z6J2 395 aaPredicted RBP14.08□□□□□ -0.16
LTBR-208ENST00000541005 ZC3H3Q8IXZ2 948 aaKnown RBP14.08□□□□□ -0.16
LTBR-208ENST00000541005 ADGRF2Q8IZF7 708 aa14.08□□□□□ -0.16
LTBR-208ENST00000541005 ERCC4Q92889 916 aaPredicted RBP14.08□□□□□ -0.16
LTBR-208ENST00000541005 MYADMQ96S97 322 aa14.08□□□□□ -0.16
LTBR-208ENST00000541005 TMEM209Q96SK2 561 aa14.08□□□□□ -0.16
LTBR-208ENST00000541005 MKNK1Q9BUB5 465 aa14.08□□□□□ -0.16
LTBR-208ENST00000541005 XYLT2Q9H1B5 865 aa14.08□□□□□ -0.16
LTBR-208ENST00000541005 CRISPLD1Q9H336 500 aa14.08□□□□□ -0.16
LTBR-208ENST00000541005 C11orf16Q9NQ32 467 aa14.08□□□□□ -0.16
LTBR-208ENST00000541005 DNMT3BQ9UBC3 853 aaKnown RBP14.08□□□□□ -0.16
LTBR-208ENST00000541005 R3HCC1Q9Y3T6 440 aaKnown RBP14.08□□□□□ -0.16
LTBR-208ENST00000541005 YIPF1Q9Y548 306 aa14.08□□□□□ -0.16
LTBR-208ENST00000541005 SNX9Q9Y5X1 595 aa14.08□□□□□ -0.16
LTBR-208ENST00000541005 PATJQ8NI35 1801 aa14.08□□□□□ -0.16
LTBR-208ENST00000541005 TULP1O00294 542 aaPredicted RBP14.07□□□□□ -0.16
LTBR-208ENST00000541005 GPR37L1O60883 481 aa14.07□□□□□ -0.16
LTBR-208ENST00000541005 AKAP3O75969 853 aa14.07□□□□□ -0.16
LTBR-208ENST00000541005 C4BPAP04003 597 aaKnown RBP14.07□□□□□ -0.16
LTBR-208ENST00000541005 FAM163BP0C2L3 166 aa14.07□□□□□ -0.16
LTBR-208ENST00000541005 PPP1R2P41236 205 aa14.07□□□□□ -0.16
LTBR-208ENST00000541005 LHX1P48742 406 aa14.07□□□□□ -0.16
LTBR-208ENST00000541005 EPHA5P54756 1037 aa14.07□□□□□ -0.16
LTBR-208ENST00000541005 MYL7Q01449 175 aa14.07□□□□□ -0.16
LTBR-208ENST00000541005 ZACNQ401N2 412 aa14.07□□□□□ -0.16
LTBR-208ENST00000541005 PABPC1LQ4VXU2 614 aaKnown RBP14.07□□□□□ -0.16
LTBR-208ENST00000541005 C1orf220Q5T0J3 134 aa14.07□□□□□ -0.16
LTBR-208ENST00000541005 CEP135Q66GS9 1140 aa14.07□□□□□ -0.16
LTBR-208ENST00000541005 FOXR2Q6PJQ5 311 aa14.07□□□□□ -0.16
LTBR-208ENST00000541005 INTS8Q75QN2 995 aaKnown RBP14.07□□□□□ -0.16
LTBR-208ENST00000541005 GET4Q7L5D6 327 aaPredicted RBP14.07□□□□□ -0.16
LTBR-208ENST00000541005 ADSSL1Q8N142 457 aa14.07□□□□□ -0.16
LTBR-208ENST00000541005 LEMD2Q8NC56 503 aa14.07□□□□□ -0.16
LTBR-208ENST00000541005 KBTBD7Q8WVZ9 684 aa14.07□□□□□ -0.16
LTBR-208ENST00000541005 EDAQ92838 391 aa14.07□□□□□ -0.16
LTBR-208ENST00000541005 PGLYRP2Q96PD5 576 aa14.07□□□□□ -0.16
LTBR-208ENST00000541005 PKMYT1Q99640 499 aa14.07□□□□□ -0.16
LTBR-208ENST00000541005 ACBD6Q9BR61 282 aa14.07□□□□□ -0.16
LTBR-208ENST00000541005 HCFC1R1Q9NWW0 138 aa14.07□□□□□ -0.16
LTBR-208ENST00000541005 IGSF9Q9P2J2 1179 aa14.07□□□□□ -0.16
LTBR-208ENST00000541005 MAN1B1Q9UKM7 699 aa14.07□□□□□ -0.16
LTBR-208ENST00000541005 SORCS3Q9UPU3 1222 aa14.07□□□□□ -0.16
LTBR-208ENST00000541005 KIF26AQ9ULI4 1882 aaPredicted RBP14.07□□□□□ -0.16
LTBR-208ENST00000541005 HELZP42694 1942 aaKnown RBP14.06□□□□□ -0.16
LTBR-208ENST00000541005 ANHXE9PGG2 379 aa14.06□□□□□ -0.16
LTBR-208ENST00000541005 TACC1O75410 805 aa14.06□□□□□ -0.16
LTBR-208ENST00000541005 MICAL2O94851 1124 aa14.06□□□□□ -0.16
LTBR-208ENST00000541005 CST3P01034 146 aaPredicted RBP14.06□□□□□ -0.16
LTBR-208ENST00000541005 RHOP08100 348 aa14.06□□□□□ -0.16
LTBR-208ENST00000541005 LAMP2P13473 410 aa14.06□□□□□ -0.16
LTBR-208ENST00000541005 PTPN2P17706 415 aa14.06□□□□□ -0.16
LTBR-208ENST00000541005 WARSP23381 471 aaKnown RBP14.06□□□□□ -0.16
LTBR-208ENST00000541005 PCSK1P29120 753 aa14.06□□□□□ -0.16
LTBR-208ENST00000541005 GBP2P32456 591 aaPredicted RBP14.06□□□□□ -0.16
LTBR-208ENST00000541005 PSMC2P35998 433 aaKnown RBP14.06□□□□□ -0.16
LTBR-208ENST00000541005 DLG4P78352 724 aa14.06□□□□□ -0.16
LTBR-208ENST00000541005 NTHL1P78549 312 aa14.06□□□□□ -0.16
LTBR-208ENST00000541005 ZXDAP98168 799 aa14.06□□□□□ -0.16
LTBR-208ENST00000541005 TSPY1Q01534 308 aa14.06□□□□□ -0.16
LTBR-208ENST00000541005 LRRC63Q05C16 580 aa14.06□□□□□ -0.16
LTBR-208ENST00000541005 TWF1Q12792 350 aa14.06□□□□□ -0.16
LTBR-208ENST00000541005 DUSP4Q13115 394 aa14.06□□□□□ -0.16
LTBR-208ENST00000541005 ADAM9Q13443 819 aa14.06□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 25.3 ms