RNA–Protein interactions for RNA: ENST00000540906.1

AP003559.1-201, humanhuman

TSL 3 BASIC

Gene AP003559.1, Length 1,831 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AP003559.1-201ENST00000540906 SYCE1Q8N0S2 351 aa13.06□□□□□ -0.32
AP003559.1-201ENST00000540906 PCSK9Q8NBP7 692 aaKnown RBP13.06□□□□□ -0.32
AP003559.1-201ENST00000540906 GSTCDQ8NEC7 633 aa13.06□□□□□ -0.32
AP003559.1-201ENST00000540906 HDAC7Q8WUI4 952 aa13.06□□□□□ -0.32
AP003559.1-201ENST00000540906 CD101Q93033 1021 aa13.06□□□□□ -0.32
AP003559.1-201ENST00000540906 MIOSQ9NXC5 875 aa13.06□□□□□ -0.32
AP003559.1-201ENST00000540906 ADAM22Q9P0K1 906 aa13.06□□□□□ -0.32
AP003559.1-201ENST00000540906 TCRBV5S1A1TA0A578 114 aa13.05□□□□□ -0.32
AP003559.1-201ENST00000540906 M0QZ92 97 aa13.05□□□□□ -0.32
AP003559.1-201ENST00000540906 O00370 1275 aa13.05□□□□□ -0.32
AP003559.1-201ENST00000540906 PIRO00625 290 aa13.05□□□□□ -0.32
AP003559.1-201ENST00000540906 CEP104O60308 925 aa13.05□□□□□ -0.32
AP003559.1-201ENST00000540906 ZMYND10O75800 440 aa13.05□□□□□ -0.32
AP003559.1-201ENST00000540906 KCNE1P15382 129 aa13.05□□□□□ -0.32
AP003559.1-201ENST00000540906 NDST1P52848 882 aa13.05□□□□□ -0.32
AP003559.1-201ENST00000540906 LBX1P52954 281 aa13.05□□□□□ -0.32
AP003559.1-201ENST00000540906 VSNL1P62760 191 aa13.05□□□□□ -0.32
AP003559.1-201ENST00000540906 PTPN11Q06124 597 aaPredicted RBP13.05□□□□□ -0.32
AP003559.1-201ENST00000540906 INCA1Q0VD86 236 aa13.05□□□□□ -0.32
AP003559.1-201ENST00000540906 FBXO47Q5MNV8 452 aa13.05□□□□□ -0.32
AP003559.1-201ENST00000540906 TRAF7Q6Q0C0 670 aa13.05□□□□□ -0.32
AP003559.1-201ENST00000540906 TRIM72Q6ZMU5 477 aa13.05□□□□□ -0.32
AP003559.1-201ENST00000540906 RNF180Q86T96 592 aa13.05□□□□□ -0.32
AP003559.1-201ENST00000540906 PDCL2Q8N4E4 241 aa13.05□□□□□ -0.32
AP003559.1-201ENST00000540906 BEST2Q8NFU1 509 aa13.05□□□□□ -0.32
AP003559.1-201ENST00000540906 CYP3A43Q9HB55 503 aa13.05□□□□□ -0.32
AP003559.1-201ENST00000540906 AVENQ9NQS1 362 aaPredicted RBP13.05□□□□□ -0.32
AP003559.1-201ENST00000540906 ANAPC7Q9UJX3 599 aa13.05□□□□□ -0.32
AP003559.1-201ENST00000540906 PADI3Q9ULW8 664 aa13.05□□□□□ -0.32
AP003559.1-201ENST00000540906 PCDHGC3Q9UN70 934 aa13.05□□□□□ -0.32
AP003559.1-201ENST00000540906 SNX9Q9Y5X1 595 aa13.05□□□□□ -0.32
AP003559.1-201ENST00000540906 A0A1W2PQ45 241 aaPredicted RBP13.04□□□□□ -0.32
AP003559.1-201ENST00000540906 A0A1W2PQY0 241 aa13.04□□□□□ -0.32
AP003559.1-201ENST00000540906 MYCP01106 439 aaPredicted RBP13.04□□□□□ -0.32
AP003559.1-201ENST00000540906 FGFR1P11362 822 aa13.04□□□□□ -0.32
AP003559.1-201ENST00000540906 MMP8P22894 467 aa13.04□□□□□ -0.32
AP003559.1-201ENST00000540906 GRK4P32298 578 aa13.04□□□□□ -0.32
AP003559.1-201ENST00000540906 CDH5P33151 784 aaPredicted RBP13.04□□□□□ -0.32
AP003559.1-201ENST00000540906 TNNC1P63316 161 aa13.04□□□□□ -0.32
AP003559.1-201ENST00000540906 MAMLD1Q13495 774 aa13.04□□□□□ -0.32
AP003559.1-201ENST00000540906 PTPN20Q4JDL3 420 aa13.04□□□□□ -0.32
AP003559.1-201ENST00000540906 CYP4A22Q5TCH4 519 aa13.04□□□□□ -0.32
AP003559.1-201ENST00000540906 CCDC181Q5TID7 509 aa13.04□□□□□ -0.32
AP003559.1-201ENST00000540906 RSPH3Q86UC2 560 aa13.04□□□□□ -0.32
AP003559.1-201ENST00000540906 MMGT1Q8N4V1 131 aa13.04□□□□□ -0.32
AP003559.1-201ENST00000540906 TMEM176AQ96HP8 235 aa13.04□□□□□ -0.32
AP003559.1-201ENST00000540906 LRRC1Q9BTT6 524 aa13.04□□□□□ -0.32
AP003559.1-201ENST00000540906 PLEKHA4Q9H4M7 779 aa13.04□□□□□ -0.32
AP003559.1-201ENST00000540906 FAM105AQ9NUU6 356 aa13.04□□□□□ -0.32
AP003559.1-201ENST00000540906 UVRAGQ9P2Y5 699 aa13.04□□□□□ -0.32
AP003559.1-201ENST00000540906 UBQLN1Q9UMX0 589 aaKnown RBP13.04□□□□□ -0.32
AP003559.1-201ENST00000540906 NR2E1Q9Y466 385 aa13.04□□□□□ -0.32
AP003559.1-201ENST00000540906 MICAL2O94851 1124 aa13.04□□□□□ -0.32
AP003559.1-201ENST00000540906 PAEPP09466 180 aa13.04□□□□□ -0.32
AP003559.1-201ENST00000540906 ITGA4P13612 1032 aa13.04□□□□□ -0.32
AP003559.1-201ENST00000540906 ATF7P17544 494 aaPredicted RBP13.04□□□□□ -0.32
AP003559.1-201ENST00000540906 IBSPP21815 317 aaPredicted RBP13.04□□□□□ -0.32
AP003559.1-201ENST00000540906 MLH1P40692 756 aa13.04□□□□□ -0.32
AP003559.1-201ENST00000540906 PEX5P50542 639 aa13.04□□□□□ -0.32
AP003559.1-201ENST00000540906 YWHAEP62258 255 aaKnown RBP13.04□□□□□ -0.32
AP003559.1-201ENST00000540906 PTK7Q13308 1070 aa13.04□□□□□ -0.32
AP003559.1-201ENST00000540906 DSC3Q14574 896 aa13.04□□□□□ -0.32
AP003559.1-201ENST00000540906 MBTPS1Q14703 1052 aa13.04□□□□□ -0.32
AP003559.1-201ENST00000540906 SOWAHAQ2M3V2 549 aa13.04□□□□□ -0.32
AP003559.1-201ENST00000540906 CFAP221Q4G0U5 840 aa13.04□□□□□ -0.32
AP003559.1-201ENST00000540906 PLEKHA7Q6IQ23 1121 aa13.04□□□□□ -0.32
AP003559.1-201ENST00000540906 AGMOQ6ZNB7 445 aa13.04□□□□□ -0.32
AP003559.1-201ENST00000540906 RASGEF1CQ8N431 466 aa13.04□□□□□ -0.32
AP003559.1-201ENST00000540906 C12orf29Q8N999 325 aa13.04□□□□□ -0.32
AP003559.1-201ENST00000540906 USP38Q8NB14 1042 aa13.04□□□□□ -0.32
AP003559.1-201ENST00000540906 SLAIN1Q8ND83 568 aa13.04□□□□□ -0.32
AP003559.1-201ENST00000540906 KBTBD7Q8WVZ9 684 aa13.04□□□□□ -0.32
AP003559.1-201ENST00000540906 PBKQ96KB5 322 aa13.04□□□□□ -0.32
AP003559.1-201ENST00000540906 PPP1R10Q96QC0 940 aaKnown RBP13.04□□□□□ -0.32
AP003559.1-201ENST00000540906 GAD1Q99259 594 aa13.04□□□□□ -0.32
AP003559.1-201ENST00000540906 DPEP3Q9H4B8 488 aa13.04□□□□□ -0.32
AP003559.1-201ENST00000540906 BARX2Q9UMQ3 279 aaPredicted RBP13.04□□□□□ -0.32
AP003559.1-201ENST00000540906 TRIM17Q9Y577 477 aa13.04□□□□□ -0.32
AP003559.1-201ENST00000540906 CES2O00748 559 aa13.03□□□□□ -0.32
AP003559.1-201ENST00000540906 HSPA8P11142 646 aaKnown RBP13.03□□□□□ -0.32
AP003559.1-201ENST00000540906 PAFAH1B1P43034 410 aa13.03□□□□□ -0.32
AP003559.1-201ENST00000540906 RPL7AP62424 266 aaKnown RBP13.03□□□□□ -0.32
AP003559.1-201ENST00000540906 OGDHQ02218 1023 aa13.03□□□□□ -0.32
AP003559.1-201ENST00000540906 C1QBPQ07021 282 aaKnown RBP13.03□□□□□ -0.32
AP003559.1-201ENST00000540906 ZNF252P-AS1Q0IIN9 211 aa13.03□□□□□ -0.32
AP003559.1-201ENST00000540906 CCDC142Q17RM4 750 aa13.03□□□□□ -0.32
AP003559.1-201ENST00000540906 DPH6Q7L8W6 267 aa13.03□□□□□ -0.32
AP003559.1-201ENST00000540906 LRRC52Q8N7C0 313 aa13.03□□□□□ -0.32
AP003559.1-201ENST00000540906 UBA3Q8TBC4 463 aa13.03□□□□□ -0.32
AP003559.1-201ENST00000540906 FAXDC2Q96IV6 333 aa13.03□□□□□ -0.32
AP003559.1-201ENST00000540906 AP1M1Q9BXS5 423 aa13.03□□□□□ -0.32
AP003559.1-201ENST00000540906 UNC93B1Q9H1C4 597 aa13.03□□□□□ -0.32
AP003559.1-201ENST00000540906 HMX1Q9NP08 348 aaPredicted RBP13.03□□□□□ -0.32
AP003559.1-201ENST00000540906 DMGDHQ9UI17 866 aaKnown RBP13.03□□□□□ -0.32
AP003559.1-201ENST00000540906 TMEM59LQ9UK28 342 aa13.03□□□□□ -0.32
AP003559.1-201ENST00000540906 RAB21Q9UL25 225 aa13.03□□□□□ -0.32
AP003559.1-201ENST00000540906 WDR3Q9UNX4 943 aaKnown RBP eCLIP13.03□□□□□ -0.32
AP003559.1-201ENST00000540906 TLR3O15455 904 aaKnown RBP13.02□□□□□ -0.32
AP003559.1-201ENST00000540906 LSM8O95777 96 aaKnown RBP13.02□□□□□ -0.32
AP003559.1-201ENST00000540906 GNRH1P01148 92 aa13.02□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 42.1 ms