RNA–Protein interactions for RNA: ENST00000540865.5

SNHG1-214, Transcript of small nucleolar RNA host gene 1, humanhuman

TSL 5

Gene SNHG1, Length 784 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG1-214ENST00000540865 NLRP12P59046 1061 aa5.16□□□□□ -1.58
SNHG1-214ENST00000540865 DAB2P98082 770 aa5.16□□□□□ -1.58
SNHG1-214ENST00000540865 USP41Q3LFD5 358 aa5.16□□□□□ -1.58
SNHG1-214ENST00000540865 LONRF3Q496Y0 759 aa5.16□□□□□ -1.58
SNHG1-214ENST00000540865 AASDHQ4L235 1098 aaPredicted RBP5.16□□□□□ -1.58
SNHG1-214ENST00000540865 PRSS36Q5K4E3 855 aa5.16□□□□□ -1.58
SNHG1-214ENST00000540865 AGMOQ6ZNB7 445 aa5.16□□□□□ -1.58
SNHG1-214ENST00000540865 GRASPQ7Z6J2 395 aaPredicted RBP5.16□□□□□ -1.58
SNHG1-214ENST00000540865 ZNF410Q86VK4 478 aa5.16□□□□□ -1.58
SNHG1-214ENST00000540865 SRBD1Q8N5C6 995 aaKnown RBP5.16□□□□□ -1.58
SNHG1-214ENST00000540865 C12orf50Q8NA57 414 aaPredicted RBP5.16□□□□□ -1.58
SNHG1-214ENST00000540865 DNASE1L2Q92874 299 aa5.16□□□□□ -1.58
SNHG1-214ENST00000540865 LOXL4Q96JB6 756 aa5.16□□□□□ -1.58
SNHG1-214ENST00000540865 ZNF668Q96K58 619 aaPredicted RBP5.16□□□□□ -1.58
SNHG1-214ENST00000540865 LSM14BQ9BX40 385 aaKnown RBP5.16□□□□□ -1.58
SNHG1-214ENST00000540865 RSAD1Q9HA92 442 aa5.16□□□□□ -1.58
SNHG1-214ENST00000540865 UBN1Q9NPG3 1134 aa5.16□□□□□ -1.58
SNHG1-214ENST00000540865 RIC8AQ9NPQ8 531 aa5.16□□□□□ -1.58
SNHG1-214ENST00000540865 RXFP3Q9NSD7 469 aa5.16□□□□□ -1.58
SNHG1-214ENST00000540865 DIAPH3Q9NSV4 1193 aa5.16□□□□□ -1.58
SNHG1-214ENST00000540865 TBC1D22BQ9NU19 505 aa5.16□□□□□ -1.58
SNHG1-214ENST00000540865 MARCH5Q9NX47 278 aa5.16□□□□□ -1.58
SNHG1-214ENST00000540865 PPP4R2Q9NY27 417 aa5.16□□□□□ -1.58
SNHG1-214ENST00000540865 GABBR1Q9UBS5 961 aa5.16□□□□□ -1.58
SNHG1-214ENST00000540865 RCAN3Q9UKA8 241 aa5.16□□□□□ -1.58
SNHG1-214ENST00000540865 KCNH3Q9ULD8 1083 aa5.16□□□□□ -1.58
SNHG1-214ENST00000540865 PIN4Q9Y237 131 aaKnown RBP5.16□□□□□ -1.58
SNHG1-214ENST00000540865 PRG3Q9Y2Y8 225 aaPredicted RBP5.16□□□□□ -1.58
SNHG1-214ENST00000540865 PCDHB2Q9Y5E7 798 aa5.16□□□□□ -1.58
SNHG1-214ENST00000540865 PCDHA10Q9Y5I2 948 aa5.16□□□□□ -1.58
SNHG1-214ENST00000540865 AK5Q9Y6K8 562 aa5.16□□□□□ -1.58
SNHG1-214ENST00000540865 LOXHD1Q8IVV2 1947 aa5.16□□□□□ -1.58
SNHG1-214ENST00000540865 LAMA1P25391 3075 aa5.15□□□□□ -1.58
SNHG1-214ENST00000540865 A0A087WZ62 844 aa5.15□□□□□ -1.59
SNHG1-214ENST00000540865 TAF4O00268 1085 aa5.15□□□□□ -1.59
SNHG1-214ENST00000540865 ZNF862O60290 1169 aa5.15□□□□□ -1.59
SNHG1-214ENST00000540865 CSDE1O75534 798 aaKnown RBP5.15□□□□□ -1.59
SNHG1-214ENST00000540865 PLEKHA8P1O95397 391 aa5.15□□□□□ -1.59
SNHG1-214ENST00000540865 POMCP01189 267 aa5.15□□□□□ -1.59
SNHG1-214ENST00000540865 CYP3A4P08684 503 aa5.15□□□□□ -1.59
SNHG1-214ENST00000540865 ZNF806P0C7X5 589 aa5.15□□□□□ -1.59
SNHG1-214ENST00000540865 HOXA6P31267 233 aa5.15□□□□□ -1.59
SNHG1-214ENST00000540865 CD68P34810 354 aaPredicted RBP5.15□□□□□ -1.59
SNHG1-214ENST00000540865 SREBF1P36956 1147 aa5.15□□□□□ -1.59
SNHG1-214ENST00000540865 OR1G1P47890 313 aa5.15□□□□□ -1.59
SNHG1-214ENST00000540865 DNM2P50570 870 aa5.15□□□□□ -1.59
SNHG1-214ENST00000540865 NTHL1P78549 312 aa5.15□□□□□ -1.59
SNHG1-214ENST00000540865 GSTM4Q03013 218 aa5.15□□□□□ -1.59
SNHG1-214ENST00000540865 RING1Q06587 406 aa5.15□□□□□ -1.59
SNHG1-214ENST00000540865 DSC1Q08554 894 aa5.15□□□□□ -1.59
SNHG1-214ENST00000540865 C19orf57Q0VDD7 668 aa5.15□□□□□ -1.59
SNHG1-214ENST00000540865 AP3B2Q13367 1082 aa5.15□□□□□ -1.59
SNHG1-214ENST00000540865 TARBP2Q15633 366 aaKnown RBP5.15□□□□□ -1.59
SNHG1-214ENST00000540865 PPM1LQ5SGD2 360 aa5.15□□□□□ -1.59
SNHG1-214ENST00000540865 STPG1Q5TH74 334 aa5.15□□□□□ -1.59
SNHG1-214ENST00000540865 LIN9Q5TKA1 542 aa5.15□□□□□ -1.59
SNHG1-214ENST00000540865 CATSPER4Q7RTX7 472 aa5.15□□□□□ -1.59
SNHG1-214ENST00000540865 TRMT1LQ7Z2T5 733 aaKnown RBP5.15□□□□□ -1.59
SNHG1-214ENST00000540865 RALYLQ86SE5 291 aaKnown RBP5.15□□□□□ -1.59
SNHG1-214ENST00000540865 LONP2Q86WA8 852 aa5.15□□□□□ -1.59
SNHG1-214ENST00000540865 PLA2G4DQ86XP0 818 aa5.15□□□□□ -1.59
SNHG1-214ENST00000540865 COLGALT2Q8IYK4 626 aa5.15□□□□□ -1.59
SNHG1-214ENST00000540865 ZNF654Q8IZM8 581 aa5.15□□□□□ -1.59
SNHG1-214ENST00000540865 SPEM1Q8N4L4 309 aa5.15□□□□□ -1.59
SNHG1-214ENST00000540865 DTWD1Q8N5C7 304 aa5.15□□□□□ -1.59
SNHG1-214ENST00000540865 CNNM3Q8NE01 707 aa5.15□□□□□ -1.59
SNHG1-214ENST00000540865 NCOA7Q8NI08 942 aa5.15□□□□□ -1.59
SNHG1-214ENST00000540865 ITFG1Q8TB96 612 aa5.15□□□□□ -1.59
SNHG1-214ENST00000540865 IGDCC4Q8TDY8 1250 aa5.15□□□□□ -1.59
SNHG1-214ENST00000540865 KXD1Q9BQD3 176 aa5.15□□□□□ -1.59
SNHG1-214ENST00000540865 FDXACB1Q9BRP7 624 aaPredicted RBP5.15□□□□□ -1.59
SNHG1-214ENST00000540865 MTA3Q9BTC8 594 aa5.15□□□□□ -1.59
SNHG1-214ENST00000540865 COLEC11Q9BWP8 271 aa5.15□□□□□ -1.59
SNHG1-214ENST00000540865 ANO3Q9BYT9 981 aa5.15□□□□□ -1.59
SNHG1-214ENST00000540865 GLT8D2Q9H1C3 349 aa5.15□□□□□ -1.59
SNHG1-214ENST00000540865 LMAN1LQ9HAT1 526 aa5.15□□□□□ -1.59
SNHG1-214ENST00000540865 TRPV5Q9NQA5 729 aa5.15□□□□□ -1.59
SNHG1-214ENST00000540865 HEBP1Q9NRV9 189 aa5.15□□□□□ -1.59
SNHG1-214ENST00000540865 GDE1Q9NZC3 331 aa5.15□□□□□ -1.59
SNHG1-214ENST00000540865 FAM8A1Q9UBU6 413 aa5.15□□□□□ -1.59
SNHG1-214ENST00000540865 TCEAL9Q9UHQ7 104 aa5.15□□□□□ -1.59
SNHG1-214ENST00000540865 FBXW11Q9UKB1 542 aa5.15□□□□□ -1.59
SNHG1-214ENST00000540865 WASF3Q9UPY6 502 aa5.15□□□□□ -1.59
SNHG1-214ENST00000540865 IGSF10Q6WRI0 2623 aa5.14□□□□□ -1.59
SNHG1-214ENST00000540865 BAZ2BQ9UIF8 2168 aaKnown RBP5.14□□□□□ -1.59
SNHG1-214ENST00000540865 IGLV3-22A0A075B6J6 115 aa5.14□□□□□ -1.59
SNHG1-214ENST00000540865 IGKV6-21A0A0C4DH24 114 aa5.14□□□□□ -1.59
SNHG1-214ENST00000540865 WDR64B1ANS9 1081 aa5.14□□□□□ -1.59
SNHG1-214ENST00000540865 CHURC1-FNTBB4DL54 471 aa5.14□□□□□ -1.59
SNHG1-214ENST00000540865 FAM86B1E9PN63 330 aa5.14□□□□□ -1.59
SNHG1-214ENST00000540865 K7ESF4 209 aa5.14□□□□□ -1.59
SNHG1-214ENST00000540865 ALX3O95076 343 aa5.14□□□□□ -1.59
SNHG1-214ENST00000540865 EPN2O95208 641 aa5.14□□□□□ -1.59
SNHG1-214ENST00000540865 ECEL1O95672 775 aa5.14□□□□□ -1.59
SNHG1-214ENST00000540865 C8AP07357 584 aa5.14□□□□□ -1.59
SNHG1-214ENST00000540865 CYP21A2P08686 494 aa5.14□□□□□ -1.59
SNHG1-214ENST00000540865 FAM86B2P0C5J1 330 aa5.14□□□□□ -1.59
SNHG1-214ENST00000540865 CALM1P0DP23 149 aa5.14□□□□□ -1.59
SNHG1-214ENST00000540865 CALM2P0DP24 149 aa5.14□□□□□ -1.59
SNHG1-214ENST00000540865 CALM3P0DP25 149 aa5.14□□□□□ -1.59
Retrieved 100 of 20,778 RNA–protein pairs in 37.9 ms