RNA–Protein interactions for RNA: ENST00000540846.6

SMAD3-204, Transcript of SMAD family member 3, humanhuman

TSL 1 (best) BASIC

Gene SMAD3, Length 1,567 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD3-204ENST00000540846 DNAAF5Q86Y56 855 aa13.32□□□□□ -0.28
SMAD3-204ENST00000540846 GPR161Q8N6U8 529 aaKnown RBP13.32□□□□□ -0.28
SMAD3-204ENST00000540846 RNF169Q8NCN4 708 aa13.32□□□□□ -0.28
SMAD3-204ENST00000540846 TPCN2Q8NHX9 752 aa13.32□□□□□ -0.28
SMAD3-204ENST00000540846 CTNNBL1Q8WYA6 563 aaPredicted RBP13.32□□□□□ -0.28
SMAD3-204ENST00000540846 DDX1Q92499 740 aaKnown RBP13.32□□□□□ -0.28
SMAD3-204ENST00000540846 ELMO3Q96BJ8 720 aa13.32□□□□□ -0.28
SMAD3-204ENST00000540846 KIF12Q96FN5 646 aa13.32□□□□□ -0.28
SMAD3-204ENST00000540846 TSPAN18Q96SJ8 248 aa13.32□□□□□ -0.28
SMAD3-204ENST00000540846 XYLT2Q9H1B5 865 aa13.32□□□□□ -0.28
SMAD3-204ENST00000540846 SEPT11Q9NVA2 429 aaKnown RBP13.32□□□□□ -0.28
SMAD3-204ENST00000540846 PRKAG2Q9UGJ0 569 aa13.32□□□□□ -0.28
SMAD3-204ENST00000540846 ZMYND8Q9ULU4 1186 aaPredicted RBP13.32□□□□□ -0.28
SMAD3-204ENST00000540846 CNTN6Q9UQ52 1028 aa13.32□□□□□ -0.28
SMAD3-204ENST00000540846 TSC2P49815 1807 aa13.32□□□□□ -0.28
SMAD3-204ENST00000540846 PHACTR2O75167 634 aa13.32□□□□□ -0.28
SMAD3-204ENST00000540846 RTN2O75298 545 aa13.32□□□□□ -0.28
SMAD3-204ENST00000540846 CST3P01034 146 aaPredicted RBP13.32□□□□□ -0.28
SMAD3-204ENST00000540846 TMEM191BP0C7N4 346 aa13.32□□□□□ -0.28
SMAD3-204ENST00000540846 KRT5P13647 590 aa13.32□□□□□ -0.28
SMAD3-204ENST00000540846 SCNN1GP51170 649 aa13.32□□□□□ -0.28
SMAD3-204ENST00000540846 HADHBP55084 474 aaKnown RBP13.32□□□□□ -0.28
SMAD3-204ENST00000540846 WDR5P61964 334 aaKnown RBP13.32□□□□□ -0.28
SMAD3-204ENST00000540846 DEFB103AP81534 67 aa13.32□□□□□ -0.28
SMAD3-204ENST00000540846 SPOPLQ6IQ16 392 aa13.32□□□□□ -0.28
SMAD3-204ENST00000540846 FBXO38Q6PIJ6 1188 aa13.32□□□□□ -0.28
SMAD3-204ENST00000540846 SLFN11Q7Z7L1 901 aa13.32□□□□□ -0.28
SMAD3-204ENST00000540846 ZNF677Q86XU0 584 aa13.32□□□□□ -0.28
SMAD3-204ENST00000540846 CREG2Q8IUH2 290 aa13.32□□□□□ -0.28
SMAD3-204ENST00000540846 NPAS4Q8IUM7 802 aa13.32□□□□□ -0.28
SMAD3-204ENST00000540846 UBR7Q8N806 425 aa13.32□□□□□ -0.28
SMAD3-204ENST00000540846 CALR3Q96L12 384 aaKnown RBP13.32□□□□□ -0.28
SMAD3-204ENST00000540846 PCDHB18PQ96TA0 734 aa13.32□□□□□ -0.28
SMAD3-204ENST00000540846 IMPG2Q9BZV3 1241 aa13.32□□□□□ -0.28
SMAD3-204ENST00000540846 RC3H2Q9HBD1 1191 aaKnown RBP13.32□□□□□ -0.28
SMAD3-204ENST00000540846 UBN1Q9NPG3 1134 aa13.32□□□□□ -0.28
SMAD3-204ENST00000540846 NUB1Q9Y5A7 615 aa13.32□□□□□ -0.28
SMAD3-204ENST00000540846 TMCO5BA8MYB1 307 aa13.31□□□□□ -0.28
SMAD3-204ENST00000540846 PDE2AO00408 941 aaPredicted RBP13.31□□□□□ -0.28
SMAD3-204ENST00000540846 PPEF2O14830 753 aa13.31□□□□□ -0.28
SMAD3-204ENST00000540846 ZNF185O15231 689 aa13.31□□□□□ -0.28
SMAD3-204ENST00000540846 NCK2O43639 380 aa13.31□□□□□ -0.28
SMAD3-204ENST00000540846 BAIAP3O94812 1187 aa13.31□□□□□ -0.28
SMAD3-204ENST00000540846 FTCDO95954 541 aa13.31□□□□□ -0.28
SMAD3-204ENST00000540846 MMEP08473 750 aa13.31□□□□□ -0.28
SMAD3-204ENST00000540846 NOP2P46087 812 aaKnown RBP13.31□□□□□ -0.28
SMAD3-204ENST00000540846 GATMP50440 423 aa13.31□□□□□ -0.28
SMAD3-204ENST00000540846 BPIFB4P59827 614 aa13.31□□□□□ -0.28
SMAD3-204ENST00000540846 ITIH3Q06033 890 aa13.31□□□□□ -0.28
SMAD3-204ENST00000540846 TMEM240Q5SV17 173 aa13.31□□□□□ -0.28
SMAD3-204ENST00000540846 TAF3Q5VWG9 929 aa13.31□□□□□ -0.28
SMAD3-204ENST00000540846 ZNF365Q70YC5 407 aa13.31□□□□□ -0.28
SMAD3-204ENST00000540846 PDCL2Q8N4E4 241 aa13.31□□□□□ -0.28
SMAD3-204ENST00000540846 COG1Q8WTW3 980 aa13.31□□□□□ -0.28
SMAD3-204ENST00000540846 ANKRD36BP1Q96IX9 119 aa13.31□□□□□ -0.28
SMAD3-204ENST00000540846 CAPZA3Q96KX2 299 aa13.31□□□□□ -0.28
SMAD3-204ENST00000540846 MMS19Q96T76 1030 aa13.31□□□□□ -0.28
SMAD3-204ENST00000540846 BUD13Q9BRD0 619 aaKnown RBP eCLIP13.31□□□□□ -0.283e-9■□□□□ 10.9
SMAD3-204ENST00000540846 THAP2Q9H0W7 228 aa13.31□□□□□ -0.28
SMAD3-204ENST00000540846 GOLGA2P5Q9HBQ8 144 aa13.31□□□□□ -0.28
SMAD3-204ENST00000540846 ACP6Q9NPH0 428 aa13.31□□□□□ -0.28
SMAD3-204ENST00000540846 DPP3Q9NY33 737 aa13.31□□□□□ -0.28
SMAD3-204ENST00000540846 UBQLN1Q9UMX0 589 aaKnown RBP13.31□□□□□ -0.28
SMAD3-204ENST00000540846 TNNC2P02585 160 aa13.3□□□□□ -0.28
SMAD3-204ENST00000540846 ITGB3P05106 788 aa13.3□□□□□ -0.28
SMAD3-204ENST00000540846 CYP3A5P20815 502 aa13.3□□□□□ -0.28
SMAD3-204ENST00000540846 ABCB4P21439 1286 aa13.3□□□□□ -0.28
SMAD3-204ENST00000540846 IBSPP21815 317 aaPredicted RBP13.3□□□□□ -0.28
SMAD3-204ENST00000540846 LRPAP1P30533 357 aa13.3□□□□□ -0.28
SMAD3-204ENST00000540846 ZNF132P52740 706 aa13.3□□□□□ -0.28
SMAD3-204ENST00000540846 DSC1Q08554 894 aa13.3□□□□□ -0.28
SMAD3-204ENST00000540846 GRIK3Q13003 919 aa13.3□□□□□ -0.28
SMAD3-204ENST00000540846 GLB1LQ6UWU2 654 aa13.3□□□□□ -0.28
SMAD3-204ENST00000540846 RHOT2Q8IXI1 618 aa13.3□□□□□ -0.28
SMAD3-204ENST00000540846 SYCE1Q8N0S2 351 aa13.3□□□□□ -0.28
SMAD3-204ENST00000540846 TOP1MTQ969P6 601 aa13.3□□□□□ -0.28
SMAD3-204ENST00000540846 ARHGEF26Q96DR7 871 aa13.3□□□□□ -0.28
SMAD3-204ENST00000540846 CASD1Q96PB1 797 aa13.3□□□□□ -0.28
SMAD3-204ENST00000540846 ITGA11Q9UKX5 1188 aa13.3□□□□□ -0.28
SMAD3-204ENST00000540846 GBF1Q92538 1859 aa13.3□□□□□ -0.28
SMAD3-204ENST00000540846 RANBP2P49792 3224 aaKnown RBP13.3□□□□□ -0.28
SMAD3-204ENST00000540846 PIRO00625 290 aa13.29□□□□□ -0.28
SMAD3-204ENST00000540846 CES2O00748 559 aa13.29□□□□□ -0.28
SMAD3-204ENST00000540846 EFCAB14O75071 495 aa13.29□□□□□ -0.28
SMAD3-204ENST00000540846 DGKIO75912 1065 aa13.29□□□□□ -0.28
SMAD3-204ENST00000540846 MTA2O94776 668 aa13.29□□□□□ -0.28
SMAD3-204ENST00000540846 FTLP02792 175 aaPredicted RBP13.29□□□□□ -0.28
SMAD3-204ENST00000540846 THP07101 528 aa13.29□□□□□ -0.28
SMAD3-204ENST00000540846 IGFBP6P24592 240 aaPredicted RBP13.29□□□□□ -0.28
SMAD3-204ENST00000540846 POLR2BP30876 1174 aaKnown RBP13.29□□□□□ -0.28
SMAD3-204ENST00000540846 MYL6P60660 151 aa13.29□□□□□ -0.28
SMAD3-204ENST00000540846 SGSM1Q2NKQ1 1148 aa13.29□□□□□ -0.28
SMAD3-204ENST00000540846 NOMO2Q5JPE7 1267 aa13.29□□□□□ -0.28
SMAD3-204ENST00000540846 RASIP1Q5U651 963 aa13.29□□□□□ -0.28
SMAD3-204ENST00000540846 C9orf57Q5W0N0 161 aa13.29□□□□□ -0.28
SMAD3-204ENST00000540846 OTOP2Q7RTS6 562 aa13.29□□□□□ -0.28
SMAD3-204ENST00000540846 TMCO2Q7Z6W1 182 aaPredicted RBP13.29□□□□□ -0.28
SMAD3-204ENST00000540846 NOA1Q8NC60 698 aaKnown RBP13.29□□□□□ -0.28
SMAD3-204ENST00000540846 MSANTD4Q8NCY6 345 aa13.29□□□□□ -0.28
SMAD3-204ENST00000540846 BEST2Q8NFU1 509 aa13.29□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms