RNA–Protein interactions for RNA: ENST00000539712.5

DDB1-215, Transcript of damage specific DNA binding protein 1, humanhuman

TSL 2

Gene DDB1, Length 1,020 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDB1-215ENST00000539712 GPD1LQ8N335 351 aa18.1■□□□□ 0.49
DDB1-215ENST00000539712 SCFD1Q8WVM8 642 aa18.1■□□□□ 0.49
DDB1-215ENST00000539712 MAGEF1Q9HAY2 307 aa18.1■□□□□ 0.49
DDB1-215ENST00000539712 FAM86C1Q9NVL1 165 aa18.1■□□□□ 0.49
DDB1-215ENST00000539712 DSEQ9UL01 958 aa18.1■□□□□ 0.49
DDB1-215ENST00000539712 ZNF197O14709 1029 aa18.09■□□□□ 0.49
DDB1-215ENST00000539712 ACTN4O43707 911 aaKnown RBP18.09■□□□□ 0.49
DDB1-215ENST00000539712 ITGB3P05106 788 aa18.09■□□□□ 0.49
DDB1-215ENST00000539712 STARD6P59095 220 aa18.09■□□□□ 0.49
DDB1-215ENST00000539712 CUL4BQ13620 913 aa18.09■□□□□ 0.49
DDB1-215ENST00000539712 CYP4A22Q5TCH4 519 aa18.09■□□□□ 0.49
DDB1-215ENST00000539712 IQCEQ6IPM2 695 aa18.09■□□□□ 0.49
DDB1-215ENST00000539712 CCDC105Q8IYK2 499 aa18.09■□□□□ 0.49
DDB1-215ENST00000539712 GRAMD1CQ8IYS0 662 aa18.09■□□□□ 0.49
DDB1-215ENST00000539712 OR5B17Q8NGF7 314 aa18.09■□□□□ 0.49
DDB1-215ENST00000539712 SHKBP1Q8TBC3 707 aa18.09■□□□□ 0.49
DDB1-215ENST00000539712 ELSPBP1Q96BH3 223 aa18.09■□□□□ 0.49
DDB1-215ENST00000539712 ASB16Q96NS5 453 aa18.09■□□□□ 0.49
DDB1-215ENST00000539712 DDX23Q9BUQ8 820 aaKnown RBP18.09■□□□□ 0.49
DDB1-215ENST00000539712 HSPBP1Q9NZL4 362 aa18.09■□□□□ 0.49
DDB1-215ENST00000539712 DLGAP2Q9P1A6 1054 aa18.09■□□□□ 0.49
DDB1-215ENST00000539712 HSFX1Q9UBD0 423 aa18.09■□□□□ 0.49
DDB1-215ENST00000539712 AGAP1Q9UPQ3 857 aa18.09■□□□□ 0.49
DDB1-215ENST00000539712 NCANO14594 1321 aa18.08■□□□□ 0.49
DDB1-215ENST00000539712 SHISA7A6NL88 538 aa18.08■□□□□ 0.48
DDB1-215ENST00000539712 KIAA0391O15091 583 aaKnown RBP18.08■□□□□ 0.48
DDB1-215ENST00000539712 KLRC4O43908 158 aa18.08■□□□□ 0.48
DDB1-215ENST00000539712 MYL4P12829 197 aa18.08■□□□□ 0.48
DDB1-215ENST00000539712 SNW1Q13573 536 aaKnown RBP18.08■□□□□ 0.48
DDB1-215ENST00000539712 SV2CQ496J9 727 aa18.08■□□□□ 0.48
DDB1-215ENST00000539712 SLC39A12Q504Y0 691 aa18.08■□□□□ 0.48
DDB1-215ENST00000539712 STXBP4Q6ZWJ1 553 aa18.08■□□□□ 0.48
DDB1-215ENST00000539712 DNAJB7Q7Z6W7 309 aaPredicted RBP18.08■□□□□ 0.48
DDB1-215ENST00000539712 ELMOD1Q8N336 334 aa18.08■□□□□ 0.48
DDB1-215ENST00000539712 PDCL2Q8N4E4 241 aa18.08■□□□□ 0.48
DDB1-215ENST00000539712 DTWD2Q8NBA8 298 aa18.08■□□□□ 0.48
DDB1-215ENST00000539712 LEMD2Q8NC56 503 aa18.08■□□□□ 0.48
DDB1-215ENST00000539712 CACTINQ8WUQ7 758 aaKnown RBP18.08■□□□□ 0.48
DDB1-215ENST00000539712 LEO1Q8WVC0 666 aaPredicted RBP18.08■□□□□ 0.48
DDB1-215ENST00000539712 MTMR12Q9C0I1 747 aa18.08■□□□□ 0.48
DDB1-215ENST00000539712 GZF1Q9H116 711 aaPredicted RBP18.08■□□□□ 0.48
DDB1-215ENST00000539712 ZNF334Q9HCZ1 680 aaPredicted RBP18.08■□□□□ 0.48
DDB1-215ENST00000539712 ASAH2Q9NR71 780 aa18.08■□□□□ 0.48
DDB1-215ENST00000539712 AGPAT3Q9NRZ7 376 aa18.08■□□□□ 0.48
DDB1-215ENST00000539712 TMLHEQ9NVH6 421 aa18.08■□□□□ 0.48
DDB1-215ENST00000539712 INTS13Q9NVM9 706 aa18.08■□□□□ 0.48
DDB1-215ENST00000539712 FAM13BQ9NYF5 915 aa18.08■□□□□ 0.48
DDB1-215ENST00000539712 SERTAD1Q9UHV2 236 aa18.08■□□□□ 0.48
DDB1-215ENST00000539712 L1RE1Q9UN81 338 aa18.08■□□□□ 0.48
DDB1-215ENST00000539712 PVALEFA0A1B0GWK0 134 aa18.07■□□□□ 0.48
DDB1-215ENST00000539712 SLFN14P0C7P3 912 aa18.07■□□□□ 0.48
DDB1-215ENST00000539712 GLULP15104 373 aa18.07■□□□□ 0.48
DDB1-215ENST00000539712 ATF6P18850 670 aa18.07■□□□□ 0.48
DDB1-215ENST00000539712 PNPLA4P41247 253 aa18.07■□□□□ 0.48
DDB1-215ENST00000539712 AFMP43652 599 aa18.07■□□□□ 0.48
DDB1-215ENST00000539712 EPHB3P54753 998 aa18.07■□□□□ 0.48
DDB1-215ENST00000539712 TEAD2Q15562 447 aa18.07■□□□□ 0.48
DDB1-215ENST00000539712 BMT2Q1RMZ1 405 aa18.07■□□□□ 0.48
DDB1-215ENST00000539712 SLC44A4Q53GD3 710 aa18.07■□□□□ 0.48
DDB1-215ENST00000539712 LMBRD2Q68DH5 695 aaPredicted RBP18.07■□□□□ 0.48
DDB1-215ENST00000539712 GAREM2Q75VX8 874 aa18.07■□□□□ 0.48
DDB1-215ENST00000539712 LIMS2Q7Z4I7 341 aa18.07■□□□□ 0.48
DDB1-215ENST00000539712 METTL23Q86XA0 190 aa18.07■□□□□ 0.48
DDB1-215ENST00000539712 CSGALNACT2Q8N6G5 542 aa18.07■□□□□ 0.48
DDB1-215ENST00000539712 LRRC52Q8N7C0 313 aa18.07■□□□□ 0.48
DDB1-215ENST00000539712 SMARCD2Q92925 531 aa18.07■□□□□ 0.48
DDB1-215ENST00000539712 PSMG2Q969U7 264 aa18.07■□□□□ 0.48
DDB1-215ENST00000539712 ZNF560Q96MR9 790 aa18.07■□□□□ 0.48
DDB1-215ENST00000539712 MKNK1Q9BUB5 465 aa18.07■□□□□ 0.48
DDB1-215ENST00000539712 FOXQ1Q9C009 403 aa18.07■□□□□ 0.48
DDB1-215ENST00000539712 TRPV4Q9HBA0 871 aa18.07■□□□□ 0.48
DDB1-215ENST00000539712 GDAP2Q9NXN4 497 aa18.07■□□□□ 0.48
DDB1-215ENST00000539712 ITGA11Q9UKX5 1188 aa18.07■□□□□ 0.48
DDB1-215ENST00000539712 HPSEQ9Y251 543 aa18.07■□□□□ 0.48
DDB1-215ENST00000539712 F5P12259 2224 aa18.06■□□□□ 0.48
DDB1-215ENST00000539712 ZNF233A6NK53 670 aa18.06■□□□□ 0.48
DDB1-215ENST00000539712 CMA1P23946 247 aa18.06■□□□□ 0.48
DDB1-215ENST00000539712 VIPR2P41587 438 aa18.06■□□□□ 0.48
DDB1-215ENST00000539712 ALDH1A3P47895 512 aa18.06■□□□□ 0.48
DDB1-215ENST00000539712 PLD1Q13393 1074 aa18.06■□□□□ 0.48
DDB1-215ENST00000539712 NELFCDQ8IXH7 590 aa18.06■□□□□ 0.48
DDB1-215ENST00000539712 THEM5Q8N1Q8 247 aa18.06■□□□□ 0.48
DDB1-215ENST00000539712 NOC3LQ8WTT2 800 aaKnown RBP18.06■□□□□ 0.48
DDB1-215ENST00000539712 ATOH1Q92858 354 aaPredicted RBP18.06■□□□□ 0.48
DDB1-215ENST00000539712 RSPRY1Q96DX4 576 aa18.06■□□□□ 0.48
DDB1-215ENST00000539712 PAGE5Q96GU1 130 aa18.06■□□□□ 0.48
DDB1-215ENST00000539712 PKMYT1Q99640 499 aa18.06■□□□□ 0.48
DDB1-215ENST00000539712 SLC39A2Q9NP94 309 aa18.06■□□□□ 0.48
DDB1-215ENST00000539712 ASB3Q9Y575 518 aa18.06■□□□□ 0.48
DDB1-215ENST00000539712 RIF1Q5UIP0 2472 aaKnown RBP18.06■□□□□ 0.48
DDB1-215ENST00000539712 TCHHQ07283 1943 aa18.06■□□□□ 0.48
DDB1-215ENST00000539712 UBE4BO95155 1302 aa18.05■□□□□ 0.48
DDB1-215ENST00000539712 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP18.05■□□□□ 0.48
DDB1-215ENST00000539712 A0A1B0GVL5 298 aa18.05■□□□□ 0.48
DDB1-215ENST00000539712 A0A1W2PRU2 124 aa18.05■□□□□ 0.48
DDB1-215ENST00000539712 STK25O00506 426 aa18.05■□□□□ 0.48
DDB1-215ENST00000539712 CLIC2O15247 247 aa18.05■□□□□ 0.48
DDB1-215ENST00000539712 LRRN2O75325 713 aa18.05■□□□□ 0.48
DDB1-215ENST00000539712 DCNP07585 359 aaKnown RBP18.05■□□□□ 0.48
DDB1-215ENST00000539712 PFKFB1P16118 471 aa18.05■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 24.3 ms