RNA–Protein interactions for RNA: ENST00000539548.6

CDH13-204, Transcript of cadherin 13, humanhuman

TSL 2

Gene CDH13, Length 2,199 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH13-204ENST00000539548 HHATQ5VTY9 493 aa10.21□□□□□ -0.78
CDH13-204ENST00000539548 FKBP1CQ5VVH2 108 aa10.21□□□□□ -0.78
CDH13-204ENST00000539548 TDRD10Q5VZ19 366 aaKnown RBP10.21□□□□□ -0.78
CDH13-204ENST00000539548 MFSD7Q6UXD7 560 aa10.21□□□□□ -0.78
CDH13-204ENST00000539548 CENPUQ71F23 418 aa10.21□□□□□ -0.78
CDH13-204ENST00000539548 PASD1Q8IV76 773 aa10.21□□□□□ -0.78
CDH13-204ENST00000539548 ENDOVQ8N8Q3 282 aaKnown RBP10.21□□□□□ -0.78
CDH13-204ENST00000539548 FAM13CQ8NE31 585 aa10.21□□□□□ -0.78
CDH13-204ENST00000539548 MCPH1Q8NEM0 835 aa10.21□□□□□ -0.78
CDH13-204ENST00000539548 ZNF398Q8TD17 642 aa10.21□□□□□ -0.78
CDH13-204ENST00000539548 STK32AQ8WU08 396 aa10.21□□□□□ -0.78
CDH13-204ENST00000539548 SPOCK2Q92563 424 aa10.21□□□□□ -0.78
CDH13-204ENST00000539548 ZNF75CPQ92670 426 aaPredicted RBP10.21□□□□□ -0.78
CDH13-204ENST00000539548 BICD1Q96G01 975 aa10.21□□□□□ -0.78
CDH13-204ENST00000539548 FNBP1Q96RU3 617 aa10.21□□□□□ -0.78
CDH13-204ENST00000539548 PDCD2LQ9BRP1 358 aa10.21□□□□□ -0.78
CDH13-204ENST00000539548 TBC1D10AQ9BXI6 508 aa10.21□□□□□ -0.78
CDH13-204ENST00000539548 TLE6Q9H808 572 aa10.21□□□□□ -0.78
CDH13-204ENST00000539548 VPS37BQ9H9H4 285 aa10.21□□□□□ -0.78
CDH13-204ENST00000539548 KIF9Q9HAQ2 790 aa10.21□□□□□ -0.78
CDH13-204ENST00000539548 SAR1AQ9NR31 198 aa10.21□□□□□ -0.78
CDH13-204ENST00000539548 CYP39A1Q9NYL5 469 aa10.21□□□□□ -0.78
CDH13-204ENST00000539548 ZNF219Q9P2Y4 722 aaPredicted RBP10.21□□□□□ -0.78
CDH13-204ENST00000539548 CORO1CQ9ULV4 474 aaPredicted RBP10.21□□□□□ -0.78
CDH13-204ENST00000539548 SHOC2Q9UQ13 582 aa10.21□□□□□ -0.78
CDH13-204ENST00000539548 STYXL1Q9Y6J8 313 aa10.21□□□□□ -0.78
CDH13-204ENST00000539548 MYH9P35579 1960 aaKnown RBP10.2□□□□□ -0.78
CDH13-204ENST00000539548 A0A1W2PPM1 405 aa10.2□□□□□ -0.78
CDH13-204ENST00000539548 PI4K2BG5E9Z4 385 aa10.2□□□□□ -0.78
CDH13-204ENST00000539548 C2CD2LO14523 706 aa10.2□□□□□ -0.78
CDH13-204ENST00000539548 ATP2A1O14983 1001 aa10.2□□□□□ -0.78
CDH13-204ENST00000539548 WDR46O15213 610 aaKnown RBP10.2□□□□□ -0.78
CDH13-204ENST00000539548 ZNF862O60290 1169 aa10.2□□□□□ -0.78
CDH13-204ENST00000539548 DGAT1O75907 488 aa10.2□□□□□ -0.78
CDH13-204ENST00000539548 NEBLO76041 1014 aa10.2□□□□□ -0.78
CDH13-204ENST00000539548 ZWINTO95229 277 aa10.2□□□□□ -0.78
CDH13-204ENST00000539548 ITGAVP06756 1048 aa10.2□□□□□ -0.78
CDH13-204ENST00000539548 ASNSP08243 561 aa10.2□□□□□ -0.78
CDH13-204ENST00000539548 ETS1P14921 441 aa10.2□□□□□ -0.78
CDH13-204ENST00000539548 TARSP26639 723 aaKnown RBP10.2□□□□□ -0.78
CDH13-204ENST00000539548 VCPP55072 806 aaKnown RBP10.2□□□□□ -0.78
CDH13-204ENST00000539548 FASTKD3Q14CZ7 662 aaKnown RBP10.2□□□□□ -0.78
CDH13-204ENST00000539548 DLGAP5Q15398 846 aa10.2□□□□□ -0.78
CDH13-204ENST00000539548 TAF11Q15544 211 aa10.2□□□□□ -0.78
CDH13-204ENST00000539548 OASLQ15646 514 aaKnown RBP10.2□□□□□ -0.78
CDH13-204ENST00000539548 SPDYE2Q495Y8 402 aa10.2□□□□□ -0.78
CDH13-204ENST00000539548 CMPK2Q5EBM0 449 aa10.2□□□□□ -0.78
CDH13-204ENST00000539548 EFHC2Q5JST6 749 aa10.2□□□□□ -0.78
CDH13-204ENST00000539548 LMBRD2Q68DH5 695 aaPredicted RBP10.2□□□□□ -0.78
CDH13-204ENST00000539548 SPOPLQ6IQ16 392 aa10.2□□□□□ -0.78
CDH13-204ENST00000539548 XRRA1Q6P2D8 792 aa10.2□□□□□ -0.78
CDH13-204ENST00000539548 TMEM270Q6UE05 265 aa10.2□□□□□ -0.78
CDH13-204ENST00000539548 SPOCD1Q6ZMY3 1216 aa10.2□□□□□ -0.78
CDH13-204ENST00000539548 OTOAQ7RTW8 1153 aa10.2□□□□□ -0.78
CDH13-204ENST00000539548 LONP2Q86WA8 852 aa10.2□□□□□ -0.78
CDH13-204ENST00000539548 CPXCR1Q8N123 301 aa10.2□□□□□ -0.78
CDH13-204ENST00000539548 C4orf33Q8N1A6 199 aa10.2□□□□□ -0.78
CDH13-204ENST00000539548 TEX9Q8N6V9 391 aa10.2□□□□□ -0.78
CDH13-204ENST00000539548 NKD2Q969F2 451 aaPredicted RBP10.2□□□□□ -0.78
CDH13-204ENST00000539548 NAF1Q96HR8 494 aaKnown RBP10.2□□□□□ -0.78
CDH13-204ENST00000539548 RMDN3Q96TC7 470 aa10.2□□□□□ -0.78
CDH13-204ENST00000539548 SLC38A10Q9HBR0 1119 aa10.2□□□□□ -0.78
CDH13-204ENST00000539548 RAVER2Q9HCJ3 691 aaKnown RBP10.2□□□□□ -0.78
CDH13-204ENST00000539548 PXMP2Q9NR77 195 aa10.2□□□□□ -0.78
CDH13-204ENST00000539548 ARHGAP28Q9P2N2 729 aa10.2□□□□□ -0.78
CDH13-204ENST00000539548 PSMC3IPQ9P2W1 217 aaPredicted RBP10.2□□□□□ -0.78
CDH13-204ENST00000539548 KCNG1Q9UIX4 513 aa10.2□□□□□ -0.78
CDH13-204ENST00000539548 CCDC189A1A4V9 331 aa10.19□□□□□ -0.78
CDH13-204ENST00000539548 A6NHS1 94 aa10.19□□□□□ -0.78
CDH13-204ENST00000539548 HNRNPCL1O60812 293 aaKnown RBP10.19□□□□□ -0.78
CDH13-204ENST00000539548 KRT1P04264 644 aa10.19□□□□□ -0.78
CDH13-204ENST00000539548 TPBGLP0DKB5 382 aa10.19□□□□□ -0.78
CDH13-204ENST00000539548 MMP8P22894 467 aa10.19□□□□□ -0.78
CDH13-204ENST00000539548 TBXAS1P24557 533 aaPredicted RBP10.19□□□□□ -0.78
CDH13-204ENST00000539548 PTPN4P29074 926 aa10.19□□□□□ -0.78
CDH13-204ENST00000539548 BAG6P46379 1132 aa10.19□□□□□ -0.78
CDH13-204ENST00000539548 LIG4P49917 911 aa10.19□□□□□ -0.78
CDH13-204ENST00000539548 GEMIN4P57678 1058 aaKnown RBP10.19□□□□□ -0.78
CDH13-204ENST00000539548 RPL7AP62424 266 aaKnown RBP10.19□□□□□ -0.78
CDH13-204ENST00000539548 MAP3K10Q02779 954 aa10.19□□□□□ -0.78
CDH13-204ENST00000539548 PDIA2Q13087 525 aaKnown RBP10.19□□□□□ -0.78
CDH13-204ENST00000539548 KAZNQ674X7 775 aa10.19□□□□□ -0.78
CDH13-204ENST00000539548 PCGF5Q86SE9 256 aa10.19□□□□□ -0.78
CDH13-204ENST00000539548 NLRX1Q86UT6 975 aa10.19□□□□□ -0.78
CDH13-204ENST00000539548 ZBED8Q8IZ13 594 aa10.19□□□□□ -0.78
CDH13-204ENST00000539548 RBBP8NLQ8NC74 664 aaPredicted RBP10.19□□□□□ -0.78
CDH13-204ENST00000539548 SUPT20HQ8NEM7 779 aa10.19□□□□□ -0.78
CDH13-204ENST00000539548 CFAP61Q8NHU2 1237 aa10.19□□□□□ -0.78
CDH13-204ENST00000539548 ATP6V0A1Q93050 837 aa10.19□□□□□ -0.78
CDH13-204ENST00000539548 MAK16Q9BXY0 300 aaKnown RBP10.19□□□□□ -0.78
CDH13-204ENST00000539548 PHACTR1Q9C0D0 580 aa10.19□□□□□ -0.78
CDH13-204ENST00000539548 APOBEC3GQ9HC16 384 aaKnown RBP10.19□□□□□ -0.78
CDH13-204ENST00000539548 PCDH9Q9HC56 1237 aa10.19□□□□□ -0.78
CDH13-204ENST00000539548 XPNPEP1Q9NQW7 623 aa10.19□□□□□ -0.78
CDH13-204ENST00000539548 GABBR1Q9UBS5 961 aa10.19□□□□□ -0.78
CDH13-204ENST00000539548 LNPEPQ9UIQ6 1025 aa10.19□□□□□ -0.78
CDH13-204ENST00000539548 RABGEF1Q9UJ41 708 aa10.19□□□□□ -0.78
CDH13-204ENST00000539548 hCG_1818297A0A087WSY0 165 aa10.19□□□□□ -0.78
CDH13-204ENST00000539548 MAFGO15525 162 aa10.19□□□□□ -0.78
CDH13-204ENST00000539548 ATF7P17544 494 aaPredicted RBP10.19□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 24.1 ms