RNA–Protein interactions for RNA: ENST00000539417.6

RPAIN-206, Transcript of RPA interacting protein, humanhuman

TSL 2

Gene RPAIN, Length 1,471 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPAIN-206ENST00000539417 SLC7A14Q8TBB6 771 aa16.92■□□□□ 0.3
RPAIN-206ENST00000539417 SEMA4DQ92854 862 aa16.92■□□□□ 0.3
RPAIN-206ENST00000539417 CEP63Q96MT8 703 aa16.92■□□□□ 0.3
RPAIN-206ENST00000539417 MRPL45Q9BRJ2 306 aaKnown RBP16.92■□□□□ 0.3
RPAIN-206ENST00000539417 ADAM7Q9H2U9 754 aa16.92■□□□□ 0.3
RPAIN-206ENST00000539417 SFXN1Q9H9B4 322 aa16.92■□□□□ 0.3
RPAIN-206ENST00000539417 TMLHEQ9NVH6 421 aa16.92■□□□□ 0.3
RPAIN-206ENST00000539417 NXF1Q9UBU9 619 aaKnown RBP16.92■□□□□ 0.3
RPAIN-206ENST00000539417 RWDD2AQ9UIY3 292 aa16.92■□□□□ 0.3
RPAIN-206ENST00000539417 MUC3AQ02505 3323 aa16.91■□□□□ 0.3
RPAIN-206ENST00000539417 HUS1O60921 280 aa16.91■□□□□ 0.3
RPAIN-206ENST00000539417 ZMYND10O75800 440 aa16.91■□□□□ 0.3
RPAIN-206ENST00000539417 C8AP07357 584 aa16.91■□□□□ 0.3
RPAIN-206ENST00000539417 CPB1P15086 417 aa16.91■□□□□ 0.3
RPAIN-206ENST00000539417 LMO2P25791 158 aa16.91■□□□□ 0.3
RPAIN-206ENST00000539417 RAP1GAPP47736 663 aa16.91■□□□□ 0.3
RPAIN-206ENST00000539417 AP3M2P53677 418 aa16.91■□□□□ 0.3
RPAIN-206ENST00000539417 ADCY1Q08828 1119 aa16.91■□□□□ 0.3
RPAIN-206ENST00000539417 MYO1EQ12965 1108 aa16.91■□□□□ 0.3
RPAIN-206ENST00000539417 WDR72Q3MJ13 1102 aa16.91■□□□□ 0.3
RPAIN-206ENST00000539417 ADGRF2Q8IZF7 708 aa16.91■□□□□ 0.3
RPAIN-206ENST00000539417 TOP6BLQ8N6T0 577 aa16.91■□□□□ 0.3
RPAIN-206ENST00000539417 SLC35C1Q96A29 364 aa16.91■□□□□ 0.3
RPAIN-206ENST00000539417 LPIN3Q9BQK8 851 aa16.91■□□□□ 0.3
RPAIN-206ENST00000539417 ZCWPW1Q9H0M4 648 aa16.91■□□□□ 0.3
RPAIN-206ENST00000539417 SDCBP2Q9H190 292 aa16.91■□□□□ 0.3
RPAIN-206ENST00000539417 PLEKHA4Q9H4M7 779 aa16.91■□□□□ 0.3
RPAIN-206ENST00000539417 SMYD3Q9H7B4 428 aa16.91■□□□□ 0.3
RPAIN-206ENST00000539417 APOBEC3GQ9HC16 384 aaKnown RBP16.91■□□□□ 0.3
RPAIN-206ENST00000539417 CD320Q9NPF0 282 aa16.91■□□□□ 0.3
RPAIN-206ENST00000539417 DOCK6Q96HP0 2047 aa16.9■□□□□ 0.3
RPAIN-206ENST00000539417 BICDL2A1A5D9 508 aa16.9■□□□□ 0.3
RPAIN-206ENST00000539417 OR6C75A6NL08 312 aa16.9■□□□□ 0.3
RPAIN-206ENST00000539417 GABRDO14764 452 aa16.9■□□□□ 0.3
RPAIN-206ENST00000539417 CCL16O15467 120 aa16.9■□□□□ 0.3
RPAIN-206ENST00000539417 ATP2C2O75185 946 aa16.9■□□□□ 0.3
RPAIN-206ENST00000539417 STAU1O95793 577 aaKnown RBP16.9■□□□□ 0.3
RPAIN-206ENST00000539417 C1RP00736 705 aa16.9■□□□□ 0.3
RPAIN-206ENST00000539417 ATF2P15336 505 aa16.9■□□□□ 0.3
RPAIN-206ENST00000539417 CDH8P55286 799 aa16.9■□□□□ 0.3
RPAIN-206ENST00000539417 CCDC183Q5T5S1 534 aa16.9■□□□□ 0.3
RPAIN-206ENST00000539417 TCERG1LQ5VWI1 586 aa16.9■□□□□ 0.3
RPAIN-206ENST00000539417 FOXR2Q6PJQ5 311 aa16.9■□□□□ 0.3
RPAIN-206ENST00000539417 SCARA5Q6ZMJ2 495 aa16.9■□□□□ 0.3
RPAIN-206ENST00000539417 GPR149Q86SP6 731 aa16.9■□□□□ 0.3
RPAIN-206ENST00000539417 METTL23Q86XA0 190 aa16.9■□□□□ 0.3
RPAIN-206ENST00000539417 IRF2BP1Q8IU81 584 aa16.9■□□□□ 0.3
RPAIN-206ENST00000539417 ATAD1Q8NBU5 361 aa16.9■□□□□ 0.3
RPAIN-206ENST00000539417 ADAMTS19Q8TE59 1207 aa16.9■□□□□ 0.3
RPAIN-206ENST00000539417 MMS19Q96T76 1030 aa16.9■□□□□ 0.3
RPAIN-206ENST00000539417 POMKQ9H5K3 350 aa16.9■□□□□ 0.3
RPAIN-206ENST00000539417 TMEM8AQ9HCN3 771 aa16.9■□□□□ 0.3
RPAIN-206ENST00000539417 DDX43Q9NXZ2 648 aaKnown RBP16.9■□□□□ 0.3
RPAIN-206ENST00000539417 ARMCX3Q9UH62 379 aaPredicted RBP16.9■□□□□ 0.3
RPAIN-206ENST00000539417 DSEQ9UL01 958 aa16.9■□□□□ 0.3
RPAIN-206ENST00000539417 R3HCC1Q9Y3T6 440 aaKnown RBP16.9■□□□□ 0.3
RPAIN-206ENST00000539417 MTMR11A4FU01 709 aa16.89■□□□□ 0.29
RPAIN-206ENST00000539417 SPDYE4A6NLX3 237 aa16.89■□□□□ 0.29
RPAIN-206ENST00000539417 SOAT2O75908 522 aa16.89■□□□□ 0.29
RPAIN-206ENST00000539417 PAPLNO95428 1278 aa16.89■□□□□ 0.29
RPAIN-206ENST00000539417 SP100P23497 879 aaPredicted RBP16.89■□□□□ 0.29
RPAIN-206ENST00000539417 PIK3CAP42336 1068 aa16.89■□□□□ 0.29
RPAIN-206ENST00000539417 NTHL1P78549 312 aa16.89■□□□□ 0.29
RPAIN-206ENST00000539417 ENPEPQ07075 957 aa16.89■□□□□ 0.29
RPAIN-206ENST00000539417 GPR17Q13304 367 aa16.89■□□□□ 0.29
RPAIN-206ENST00000539417 CBX2Q14781 532 aaPredicted RBP16.89■□□□□ 0.29
RPAIN-206ENST00000539417 ZNF699Q32M78 642 aa16.89■□□□□ 0.29
RPAIN-206ENST00000539417 SLC39A12Q504Y0 691 aa16.89■□□□□ 0.29
RPAIN-206ENST00000539417 CAVIN1Q6NZI2 390 aaKnown RBP16.89■□□□□ 0.29
RPAIN-206ENST00000539417 HDAC7Q8WUI4 952 aa16.89■□□□□ 0.29
RPAIN-206ENST00000539417 SYAP1Q96A49 352 aaPredicted RBP16.89■□□□□ 0.29
RPAIN-206ENST00000539417 PKMYT1Q99640 499 aa16.89■□□□□ 0.29
RPAIN-206ENST00000539417 VRTNQ9H8Y1 702 aa16.89■□□□□ 0.29
RPAIN-206ENST00000539417 CYP4F11Q9HBI6 524 aa16.89■□□□□ 0.29
RPAIN-206ENST00000539417 AFF4Q9UHB7 1163 aaKnown RBP16.89■□□□□ 0.29
RPAIN-206ENST00000539417 SLC27A5Q9Y2P5 690 aa16.89■□□□□ 0.29
RPAIN-206ENST00000539417 NRG2O14511 850 aaPredicted RBP16.88■□□□□ 0.29
RPAIN-206ENST00000539417 ASS1P00966 412 aaKnown RBP16.88■□□□□ 0.29
RPAIN-206ENST00000539417 PDGFRBP09619 1106 aa16.88■□□□□ 0.29
RPAIN-206ENST00000539417 ATICP31939 592 aa16.88■□□□□ 0.29
RPAIN-206ENST00000539417 ITIH3Q06033 890 aa16.88■□□□□ 0.29
RPAIN-206ENST00000539417 DUSP4Q13115 394 aa16.88■□□□□ 0.29
RPAIN-206ENST00000539417 CCDC40Q4G0X9 1142 aa16.88■□□□□ 0.29
RPAIN-206ENST00000539417 PPM1LQ5SGD2 360 aa16.88■□□□□ 0.29
RPAIN-206ENST00000539417 C11orf57Q6ZUT1 292 aaPredicted RBP16.88■□□□□ 0.29
RPAIN-206ENST00000539417 FRMD5Q7Z6J6 570 aa16.88■□□□□ 0.29
RPAIN-206ENST00000539417 TMEM86AQ8N2M4 240 aa16.88■□□□□ 0.29
RPAIN-206ENST00000539417 CMASQ8NFW8 434 aaPredicted RBP16.88■□□□□ 0.29
RPAIN-206ENST00000539417 SMG7Q92540 1137 aaKnown RBP16.88■□□□□ 0.29
RPAIN-206ENST00000539417 COL25A1Q9BXS0 654 aaPredicted RBP16.88■□□□□ 0.29
RPAIN-206ENST00000539417 PRKD2Q9BZL6 878 aa16.88■□□□□ 0.29
RPAIN-206ENST00000539417 DPEP3Q9H4B8 488 aa16.88■□□□□ 0.29
RPAIN-206ENST00000539417 HCFC1R1Q9NWW0 138 aa16.88■□□□□ 0.29
RPAIN-206ENST00000539417 DENND4AQ7Z401 1863 aa16.88■□□□□ 0.29
RPAIN-206ENST00000539417 ARHGEF37A1IGU5 675 aa16.87■□□□□ 0.29
RPAIN-206ENST00000539417 WARSP23381 471 aaKnown RBP16.87■□□□□ 0.29
RPAIN-206ENST00000539417 GTF2H1P32780 548 aa16.87■□□□□ 0.29
RPAIN-206ENST00000539417 MXI1P50539 228 aa16.87■□□□□ 0.29
RPAIN-206ENST00000539417 PSMC1P62191 440 aaKnown RBP16.87■□□□□ 0.29
RPAIN-206ENST00000539417 TNNC1P63316 161 aa16.87■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 42 ms