RNA–Protein interactions for RNA: ENST00000538786.1

ATL3-203, Transcript of atlastin GTPase 3, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene ATL3, Length 1,920 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATL3-203ENST00000538786 HHIPL1Q96JK4 782 aa15.72■□□□□ 0.11
ATL3-203ENST00000538786 EIF2AQ9BY44 585 aaKnown RBP15.72■□□□□ 0.11
ATL3-203ENST00000538786 MED4Q9NPJ6 270 aa15.72■□□□□ 0.11
ATL3-203ENST00000538786 MTUS1Q9ULD2 1270 aa15.72■□□□□ 0.11
ATL3-203ENST00000538786 TCRBV5S1A1TA0A578 114 aa15.72■□□□□ 0.11
ATL3-203ENST00000538786 PHF2O75151 1096 aa15.72■□□□□ 0.11
ATL3-203ENST00000538786 CHRNA3P32297 505 aa15.72■□□□□ 0.11
ATL3-203ENST00000538786 DR1Q01658 176 aa15.72■□□□□ 0.11
ATL3-203ENST00000538786 TAP1Q03518 808 aa15.72■□□□□ 0.11
ATL3-203ENST00000538786 PTPN11Q06124 597 aaPredicted RBP15.72■□□□□ 0.11
ATL3-203ENST00000538786 MYO1EQ12965 1108 aa15.72■□□□□ 0.11
ATL3-203ENST00000538786 DHX34Q14147 1143 aaKnown RBP15.72■□□□□ 0.11
ATL3-203ENST00000538786 TRADDQ15628 312 aa15.72■□□□□ 0.11
ATL3-203ENST00000538786 HSP90B2PQ58FF3 399 aa15.72■□□□□ 0.11
ATL3-203ENST00000538786 DENND1BQ6P3S1 775 aa15.72■□□□□ 0.11
ATL3-203ENST00000538786 PRELID2Q8N945 189 aa15.72■□□□□ 0.11
ATL3-203ENST00000538786 TRPV1Q8NER1 839 aa15.72■□□□□ 0.11
ATL3-203ENST00000538786 TMEM40Q8WWA1 233 aa15.72■□□□□ 0.11
ATL3-203ENST00000538786 TMEM176AQ96HP8 235 aa15.72■□□□□ 0.11
ATL3-203ENST00000538786 ELOVL4Q9GZR5 314 aa15.72■□□□□ 0.11
ATL3-203ENST00000538786 IP6K2Q9UHH9 426 aa15.72■□□□□ 0.11
ATL3-203ENST00000538786 STRIP2Q9ULQ0 834 aa15.72■□□□□ 0.11
ATL3-203ENST00000538786 UTP11Q9Y3A2 253 aaKnown RBP15.72■□□□□ 0.11
ATL3-203ENST00000538786 FAM187AA6NFU0 413 aa15.71■□□□□ 0.11
ATL3-203ENST00000538786 TMEM191CA6NGB0 347 aa15.71■□□□□ 0.11
ATL3-203ENST00000538786 PSTPIP1O43586 416 aa15.71■□□□□ 0.11
ATL3-203ENST00000538786 CYBAP13498 195 aa15.71■□□□□ 0.11
ATL3-203ENST00000538786 CRYBB1P53674 252 aaPredicted RBP15.71■□□□□ 0.11
ATL3-203ENST00000538786 INCA1Q0VD86 236 aa15.71■□□□□ 0.11
ATL3-203ENST00000538786 ZBTB6Q15916 424 aa15.71■□□□□ 0.11
ATL3-203ENST00000538786 CYP1B1Q16678 543 aa15.71■□□□□ 0.11
ATL3-203ENST00000538786 MFSD14CQ5VZR4 134 aa15.71■□□□□ 0.11
ATL3-203ENST00000538786 DNAJC24Q6P3W2 148 aa15.71■□□□□ 0.11
ATL3-203ENST00000538786 RHOT1Q8IXI2 618 aa15.71■□□□□ 0.11
ATL3-203ENST00000538786 TWNKQ96RR1 684 aa15.71■□□□□ 0.11
ATL3-203ENST00000538786 ZIC5Q96T25 663 aa15.71■□□□□ 0.11
ATL3-203ENST00000538786 CELF4Q9BZC1 486 aaKnown RBP15.71■□□□□ 0.11
ATL3-203ENST00000538786 TRIM6Q9C030 488 aaPredicted RBP15.71■□□□□ 0.11
ATL3-203ENST00000538786 RAB17Q9H0T7 212 aa15.71■□□□□ 0.11
ATL3-203ENST00000538786 DOCK3Q8IZD9 2030 aa15.71■□□□□ 0.11
ATL3-203ENST00000538786 FSCN2O14926 492 aa15.7■□□□□ 0.1
ATL3-203ENST00000538786 C6orf222P0C671 652 aaPredicted RBP15.7■□□□□ 0.1
ATL3-203ENST00000538786 FAM153BP0C7A2 387 aa15.7■□□□□ 0.1
ATL3-203ENST00000538786 PSMC4P43686 418 aa15.7■□□□□ 0.1
ATL3-203ENST00000538786 GJA9P57773 515 aa15.7■□□□□ 0.1
ATL3-203ENST00000538786 FAM153CQ494X1 144 aa15.7■□□□□ 0.1
ATL3-203ENST00000538786 ALKAL1Q6UXT8 129 aa15.7■□□□□ 0.1
ATL3-203ENST00000538786 ZDHHC14Q8IZN3 488 aa15.7■□□□□ 0.1
ATL3-203ENST00000538786 MREGQ8N565 214 aa15.7■□□□□ 0.1
ATL3-203ENST00000538786 DDX27Q96GQ7 796 aaKnown RBP15.7■□□□□ 0.1
ATL3-203ENST00000538786 ZMAT2Q96NC0 199 aaKnown RBP15.7■□□□□ 0.1
ATL3-203ENST00000538786 CNTN3Q9P232 1028 aa15.7■□□□□ 0.1
ATL3-203ENST00000538786 HMGXB4Q9UGU5 601 aa15.7■□□□□ 0.1
ATL3-203ENST00000538786 PCYOX1Q9UHG3 505 aa15.7■□□□□ 0.1
ATL3-203ENST00000538786 FAM153AQ9UHL3 310 aa15.7■□□□□ 0.1
ATL3-203ENST00000538786 BARX2Q9UMQ3 279 aaPredicted RBP15.7■□□□□ 0.1
ATL3-203ENST00000538786 PIN4Q9Y237 131 aaKnown RBP15.7■□□□□ 0.1
ATL3-203ENST00000538786 GOLGA6BA6NDN3 693 aa15.7■□□□□ 0.1
ATL3-203ENST00000538786 MYADML2A6NDP7 307 aa15.7■□□□□ 0.1
ATL3-203ENST00000538786 POLR3GO15318 223 aaPredicted RBP15.7■□□□□ 0.1
ATL3-203ENST00000538786 ALDH1A1P00352 501 aa15.7■□□□□ 0.1
ATL3-203ENST00000538786 VDRP11473 427 aa15.7■□□□□ 0.1
ATL3-203ENST00000538786 ECHS1P30084 290 aa15.7■□□□□ 0.1
ATL3-203ENST00000538786 RPL7AP62424 266 aaKnown RBP15.7■□□□□ 0.1
ATL3-203ENST00000538786 HLTFQ14527 1009 aaKnown RBP eCLIP15.7■□□□□ 0.1
ATL3-203ENST00000538786 PPP1R15BQ5SWA1 713 aa15.7■□□□□ 0.1
ATL3-203ENST00000538786 TAF2Q6P1X5 1199 aa15.7■□□□□ 0.1
ATL3-203ENST00000538786 C3orf20Q8ND61 904 aa15.7■□□□□ 0.1
ATL3-203ENST00000538786 BEST2Q8NFU1 509 aa15.7■□□□□ 0.1
ATL3-203ENST00000538786 FAM71BQ8TC56 605 aa15.7■□□□□ 0.1
ATL3-203ENST00000538786 TRIB2Q92519 343 aa15.7■□□□□ 0.1
ATL3-203ENST00000538786 MAGOHBQ96A72 148 aaKnown RBP15.7■□□□□ 0.1
ATL3-203ENST00000538786 RUNDC3BQ96NL0 473 aa15.7■□□□□ 0.1
ATL3-203ENST00000538786 TSPAN18Q96SJ8 248 aa15.7■□□□□ 0.1
ATL3-203ENST00000538786 MTG1Q9BT17 334 aaPredicted RBP15.7■□□□□ 0.1
ATL3-203ENST00000538786 ARHGAP39Q9C0H5 1083 aa15.7■□□□□ 0.1
ATL3-203ENST00000538786 CXCL16Q9H2A7 254 aa15.7■□□□□ 0.1
ATL3-203ENST00000538786 NXF3Q9H4D5 531 aaKnown RBP15.7■□□□□ 0.1
ATL3-203ENST00000538786 FAM114A2Q9NRY5 505 aa15.7■□□□□ 0.1
ATL3-203ENST00000538786 HES2Q9Y543 173 aa15.7■□□□□ 0.1
ATL3-203ENST00000538786 MGAMO43451 1857 aa15.7■□□□□ 0.1
ATL3-203ENST00000538786 KAT6AQ92794 2004 aa15.69■□□□□ 0.1
ATL3-203ENST00000538786 TCRBV7S2A1N4TA0A589 114 aa15.69■□□□□ 0.1
ATL3-203ENST00000538786 RECQL4O94761 1208 aa15.69■□□□□ 0.1
ATL3-203ENST00000538786 GJB6O95452 261 aa15.69■□□□□ 0.1
ATL3-203ENST00000538786 RARAP10276 462 aa15.69■□□□□ 0.1
ATL3-203ENST00000538786 ORC1Q13415 861 aa15.69■□□□□ 0.1
ATL3-203ENST00000538786 SIX1Q15475 284 aaPredicted RBP15.69■□□□□ 0.1
ATL3-203ENST00000538786 ALS2CLQ60I27 953 aa15.69■□□□□ 0.1
ATL3-203ENST00000538786 KATNAL2Q8IYT4 538 aa15.69■□□□□ 0.1
ATL3-203ENST00000538786 LRRC52Q8N7C0 313 aa15.69■□□□□ 0.1
ATL3-203ENST00000538786 C12orf50Q8NA57 414 aaPredicted RBP15.69■□□□□ 0.1
ATL3-203ENST00000538786 MAIP1Q8WWC4 291 aa15.69■□□□□ 0.1
ATL3-203ENST00000538786 C18orf8Q96DM3 657 aa15.69■□□□□ 0.1
ATL3-203ENST00000538786 MCEEQ96PE7 176 aa15.69■□□□□ 0.1
ATL3-203ENST00000538786 RASAL2Q9UJF2 1139 aa15.69■□□□□ 0.1
ATL3-203ENST00000538786 KIAA1257Q9ULG3 409 aa15.69■□□□□ 0.1
ATL3-203ENST00000538786 WDR3Q9UNX4 943 aaKnown RBP eCLIP15.69■□□□□ 0.1
ATL3-203ENST00000538786 DAPK3O43293 454 aa15.68■□□□□ 0.1
ATL3-203ENST00000538786 HMGCRP04035 888 aa15.68■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 16.6 ms