RNA–Protein interactions for RNA: ENST00000538570.5

COL4A6-208, Transcript of collagen type IV alpha 6 chain, humanhuman

TSL 1 (best) BASIC

Gene COL4A6, Length 6,528 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A6-208ENST00000538570 FOXP3Q9BZS1 431 aa10.39□□□□□ -0.75
COL4A6-208ENST00000538570 ROPN1BQ9BZX4 212 aaPredicted RBP10.39□□□□□ -0.75
COL4A6-208ENST00000538570 ALDH8A1Q9H2A2 487 aaPredicted RBP10.39□□□□□ -0.75
COL4A6-208ENST00000538570 ROPN1Q9HAT0 212 aaPredicted RBP10.39□□□□□ -0.75
COL4A6-208ENST00000538570 EXOSC4Q9NPD3 245 aaKnown RBP10.39□□□□□ -0.75
COL4A6-208ENST00000538570 CDK12Q9NYV4 1490 aaPredicted RBP10.39□□□□□ -0.75
COL4A6-208ENST00000538570 CPSF1Q10570 1443 aaKnown RBP10.39□□□□□ -0.75
COL4A6-208ENST00000538570 PRKCBP05771 671 aa10.39□□□□□ -0.75
COL4A6-208ENST00000538570 SPRP35270 261 aaPredicted RBP10.39□□□□□ -0.75
COL4A6-208ENST00000538570 TRIM25Q14258 630 aaKnown RBP10.39□□□□□ -0.75
COL4A6-208ENST00000538570 SLC30A5Q8TAD4 765 aa10.39□□□□□ -0.75
COL4A6-208ENST00000538570 PIGBQ92521 554 aa10.39□□□□□ -0.75
COL4A6-208ENST00000538570 MED15Q96RN5 788 aa10.39□□□□□ -0.75
COL4A6-208ENST00000538570 ADAM33Q9BZ11 813 aa10.39□□□□□ -0.75
COL4A6-208ENST00000538570 CCSER2Q9H7U1 834 aa10.39□□□□□ -0.75
COL4A6-208ENST00000538570 PLOD1Q02809 727 aaPredicted RBP10.39□□□□□ -0.75
COL4A6-208ENST00000538570 LUZP2Q86TE4 346 aa10.39□□□□□ -0.75
COL4A6-208ENST00000538570 SNX31Q8N9S9 440 aa10.39□□□□□ -0.75
COL4A6-208ENST00000538570 MINPP1Q9UNW1 487 aa10.39□□□□□ -0.75
COL4A6-208ENST00000538570 NPHP3-ACAD11A0A0J9YXS1 232 aa10.38□□□□□ -0.75
COL4A6-208ENST00000538570 SSU72P8A0A1W2PR75 194 aa10.38□□□□□ -0.75
COL4A6-208ENST00000538570 NMT1P30419 496 aaKnown RBP10.38□□□□□ -0.75
COL4A6-208ENST00000538570 AKT1P31749 480 aa10.38□□□□□ -0.75
COL4A6-208ENST00000538570 AKR1D1P51857 326 aa10.38□□□□□ -0.75
COL4A6-208ENST00000538570 ATXN3P54252 364 aaPredicted RBP10.38□□□□□ -0.75
COL4A6-208ENST00000538570 DSG1Q02413 1049 aa10.38□□□□□ -0.75
COL4A6-208ENST00000538570 CCNI2Q6ZMN8 369 aaPredicted RBP10.38□□□□□ -0.75
COL4A6-208ENST00000538570 PRPF39Q86UA1 669 aaKnown RBP10.38□□□□□ -0.75
COL4A6-208ENST00000538570 RIBC1Q8N443 379 aaPredicted RBP10.38□□□□□ -0.75
COL4A6-208ENST00000538570 PRDM5Q9NQX1 630 aaPredicted RBP10.38□□□□□ -0.75
COL4A6-208ENST00000538570 TBKBP1A7MCY6 615 aa10.38□□□□□ -0.75
COL4A6-208ENST00000538570 B2RBV5 119 aa10.38□□□□□ -0.75
COL4A6-208ENST00000538570 KIF28PB7ZC32 967 aa10.38□□□□□ -0.75
COL4A6-208ENST00000538570 F5H6K3 240 aa10.38□□□□□ -0.75
COL4A6-208ENST00000538570 ECE2O60344 883 aa10.38□□□□□ -0.75
COL4A6-208ENST00000538570 WEE2P0C1S8 567 aa10.38□□□□□ -0.75
COL4A6-208ENST00000538570 SRGNP10124 158 aa10.38□□□□□ -0.75
COL4A6-208ENST00000538570 GALCP54803 685 aa10.38□□□□□ -0.75
COL4A6-208ENST00000538570 KCNK10P57789 538 aa10.38□□□□□ -0.75
COL4A6-208ENST00000538570 KLRC3Q07444 240 aa10.38□□□□□ -0.75
COL4A6-208ENST00000538570 PDIA5Q14554 519 aa10.38□□□□□ -0.75
COL4A6-208ENST00000538570 RASGRP2Q7LDG7 609 aa10.38□□□□□ -0.75
COL4A6-208ENST00000538570 ADCK2Q7Z695 626 aa10.38□□□□□ -0.75
COL4A6-208ENST00000538570 TADA1Q96BN2 335 aa10.38□□□□□ -0.75
COL4A6-208ENST00000538570 TMEM117Q9H0C3 514 aa10.38□□□□□ -0.75
COL4A6-208ENST00000538570 A0A1B0GTH6 734 aa10.38□□□□□ -0.75
COL4A6-208ENST00000538570 SEMA3DO95025 777 aa10.38□□□□□ -0.75
COL4A6-208ENST00000538570 FDX1P10109 184 aa10.38□□□□□ -0.75
COL4A6-208ENST00000538570 PDGFRAP16234 1089 aa10.38□□□□□ -0.75
COL4A6-208ENST00000538570 AGBL1Q96MI9 1066 aa10.38□□□□□ -0.75
COL4A6-208ENST00000538570 MCEEQ96PE7 176 aa10.38□□□□□ -0.75
COL4A6-208ENST00000538570 GINS4Q9BRT9 223 aa10.38□□□□□ -0.75
COL4A6-208ENST00000538570 VCPKMTQ9H867 229 aa10.38□□□□□ -0.75
COL4A6-208ENST00000538570 CD209Q9NNX6 404 aa10.38□□□□□ -0.75
COL4A6-208ENST00000538570 PAK5Q9P286 719 aa10.38□□□□□ -0.75
COL4A6-208ENST00000538570 SLC30A1Q9Y6M5 507 aa10.38□□□□□ -0.75
COL4A6-208ENST00000538570 ZCCHC11Q5TAX3 1644 aaKnown RBP10.38□□□□□ -0.75
COL4A6-208ENST00000538570 E7ENQ6 273 aa10.38□□□□□ -0.75
COL4A6-208ENST00000538570 EEF2KO00418 725 aaKnown RBP10.38□□□□□ -0.75
COL4A6-208ENST00000538570 CYTH3O43739 400 aa10.38□□□□□ -0.75
COL4A6-208ENST00000538570 SNRPAP09012 282 aaKnown RBP10.38□□□□□ -0.75
COL4A6-208ENST00000538570 TCN1P20061 433 aaPredicted RBP10.38□□□□□ -0.75
COL4A6-208ENST00000538570 SEC24CP53992 1094 aa10.38□□□□□ -0.75
COL4A6-208ENST00000538570 ARPC4P59998 168 aa10.38□□□□□ -0.75
COL4A6-208ENST00000538570 PTGISQ16647 500 aa10.38□□□□□ -0.75
COL4A6-208ENST00000538570 DDX53Q86TM3 631 aaKnown RBP10.38□□□□□ -0.75
COL4A6-208ENST00000538570 TRIM74Q86UV6 250 aa10.38□□□□□ -0.75
COL4A6-208ENST00000538570 TRIM73Q86UV7 250 aa10.38□□□□□ -0.75
COL4A6-208ENST00000538570 P3H2Q8IVL5 708 aa10.38□□□□□ -0.75
COL4A6-208ENST00000538570 RNF149Q8NC42 400 aa10.38□□□□□ -0.75
COL4A6-208ENST00000538570 WDR60Q8WVS4 1066 aa10.38□□□□□ -0.75
COL4A6-208ENST00000538570 QKIQ96PU8 341 aaKnown RBP eCLIP10.38□□□□□ -0.755e-7■■■■□ 24
COL4A6-208ENST00000538570 NDUFA13Q9P0J0 144 aa10.38□□□□□ -0.75
COL4A6-208ENST00000538570 FAM196BA6NMK8 535 aa10.38□□□□□ -0.75
COL4A6-208ENST00000538570 TAF4O00268 1085 aa10.38□□□□□ -0.75
COL4A6-208ENST00000538570 C21orf2O43822 256 aa10.38□□□□□ -0.75
COL4A6-208ENST00000538570 CLASP2O75122 1294 aaKnown RBP10.38□□□□□ -0.75
COL4A6-208ENST00000538570 IYDQ6PHW0 289 aa10.38□□□□□ -0.75
COL4A6-208ENST00000538570 C9orf72Q96LT7 481 aa10.38□□□□□ -0.75
COL4A6-208ENST00000538570 CDY2AQ9Y6F7 541 aa10.38□□□□□ -0.75
COL4A6-208ENST00000538570 CDY1Q9Y6F8 540 aa10.38□□□□□ -0.75
COL4A6-208ENST00000538570 PALLDQ8WX93 1383 aa10.38□□□□□ -0.75
COL4A6-208ENST00000538570 PLA2R1Q13018 1463 aa10.37□□□□□ -0.75
COL4A6-208ENST00000538570 ABCC3O15438 1527 aa10.37□□□□□ -0.75
COL4A6-208ENST00000538570 NFIBO00712 420 aa10.37□□□□□ -0.75
COL4A6-208ENST00000538570 TOMM70O94826 608 aa10.37□□□□□ -0.75
COL4A6-208ENST00000538570 KCNJ6P48051 423 aa10.37□□□□□ -0.75
COL4A6-208ENST00000538570 HSPA13P48723 471 aa10.37□□□□□ -0.75
COL4A6-208ENST00000538570 RCN1Q15293 331 aa10.37□□□□□ -0.75
COL4A6-208ENST00000538570 WDR72Q3MJ13 1102 aa10.37□□□□□ -0.75
COL4A6-208ENST00000538570 KCNV1Q6PIU1 500 aa10.37□□□□□ -0.75
COL4A6-208ENST00000538570 LVRNQ6Q4G3 990 aa10.37□□□□□ -0.75
COL4A6-208ENST00000538570 YAF2Q8IY57 180 aa10.37□□□□□ -0.75
COL4A6-208ENST00000538570 DIS3LQ8TF46 1054 aaKnown RBP10.37□□□□□ -0.75
COL4A6-208ENST00000538570 CATSPER2Q96P56 530 aa10.37□□□□□ -0.75
COL4A6-208ENST00000538570 CHP1Q99653 195 aa10.37□□□□□ -0.75
COL4A6-208ENST00000538570 RIC8BQ9NVN3 520 aa10.37□□□□□ -0.75
COL4A6-208ENST00000538570 USE1Q9NZ43 259 aa10.37□□□□□ -0.75
COL4A6-208ENST00000538570 GRID1Q9ULK0 1009 aa10.37□□□□□ -0.75
COL4A6-208ENST00000538570 ADGRA2Q96PE1 1338 aa10.37□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 35.2 ms