RNA–Protein interactions for RNA: ENST00000537981.5

RTN3-208, Transcript of reticulon 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RTN3, Length 2,532 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN3-208ENST00000537981 ATG7O95352 703 aa11.25□□□□□ -0.61
RTN3-208ENST00000537981 TROVE2P10155 538 aaKnown RBP eCLIP11.25□□□□□ -0.61
RTN3-208ENST00000537981 PMLP29590 882 aa11.25□□□□□ -0.61
RTN3-208ENST00000537981 ATP5DP30049 168 aa11.25□□□□□ -0.61
RTN3-208ENST00000537981 RPL5P46777 297 aaKnown RBP11.25□□□□□ -0.61
RTN3-208ENST00000537981 MYBPC1Q00872 1141 aa11.25□□□□□ -0.61
RTN3-208ENST00000537981 CALCOCO2Q13137 446 aa11.25□□□□□ -0.61
RTN3-208ENST00000537981 CROCCQ5TZA2 2017 aa11.25□□□□□ -0.61
RTN3-208ENST00000537981 OGFOD2Q6N063 350 aa11.25□□□□□ -0.61
RTN3-208ENST00000537981 C3orf62Q6ZUJ4 267 aa11.25□□□□□ -0.61
RTN3-208ENST00000537981 SV2BQ7L1I2 683 aa11.25□□□□□ -0.61
RTN3-208ENST00000537981 DHDDSQ86SQ9 333 aa11.25□□□□□ -0.61
RTN3-208ENST00000537981 ERMNQ8TAM6 284 aa11.25□□□□□ -0.61
RTN3-208ENST00000537981 ACTRT2Q8TDY3 377 aa11.25□□□□□ -0.61
RTN3-208ENST00000537981 FAM172AQ8WUF8 416 aa11.25□□□□□ -0.61
RTN3-208ENST00000537981 TEKT1Q969V4 418 aa11.25□□□□□ -0.61
RTN3-208ENST00000537981 TRPC7Q9HCX4 862 aa11.25□□□□□ -0.61
RTN3-208ENST00000537981 MYPNQ86TC9 1320 aa11.24□□□□□ -0.61
RTN3-208ENST00000537981 SH3PXD2BA1X283 911 aa11.24□□□□□ -0.61
RTN3-208ENST00000537981 A8MU76 341 aa11.24□□□□□ -0.61
RTN3-208ENST00000537981 PODXLO00592 558 aa11.24□□□□□ -0.61
RTN3-208ENST00000537981 FCHO1O14526 889 aa11.24□□□□□ -0.61
RTN3-208ENST00000537981 ADCY6O43306 1168 aa11.24□□□□□ -0.61
RTN3-208ENST00000537981 RBP3P10745 1247 aa11.24□□□□□ -0.61
RTN3-208ENST00000537981 NELFEP18615 380 aaKnown RBP11.24□□□□□ -0.61
RTN3-208ENST00000537981 RRM1P23921 792 aa11.24□□□□□ -0.61
RTN3-208ENST00000537981 RAP1GDS1P52306 607 aa11.24□□□□□ -0.61
RTN3-208ENST00000537981 AP2B1P63010 937 aa11.24□□□□□ -0.61
RTN3-208ENST00000537981 ZBTB16Q05516 673 aa11.24□□□□□ -0.61
RTN3-208ENST00000537981 DMPKQ09013 629 aa11.24□□□□□ -0.61
RTN3-208ENST00000537981 ASPHQ12797 758 aa11.24□□□□□ -0.61
RTN3-208ENST00000537981 PDE1CQ14123 709 aaPredicted RBP11.24□□□□□ -0.61
RTN3-208ENST00000537981 HSF5Q4G112 596 aaPredicted RBP11.24□□□□□ -0.61
RTN3-208ENST00000537981 ANKRD20A4Q4UJ75 823 aa11.24□□□□□ -0.61
RTN3-208ENST00000537981 COBLL1Q53SF7 1204 aa11.24□□□□□ -0.61
RTN3-208ENST00000537981 DCAF17Q5H9S7 520 aaPredicted RBP11.24□□□□□ -0.61
RTN3-208ENST00000537981 DGKHQ86XP1 1220 aa11.24□□□□□ -0.61
RTN3-208ENST00000537981 PIP4K2CQ8TBX8 421 aa11.24□□□□□ -0.61
RTN3-208ENST00000537981 RFFLQ8WZ73 363 aa11.24□□□□□ -0.61
RTN3-208ENST00000537981 ZNF512Q96ME7 567 aaPredicted RBP11.24□□□□□ -0.61
RTN3-208ENST00000537981 PRPF18Q99633 342 aaKnown RBP11.24□□□□□ -0.61
RTN3-208ENST00000537981 SMYD3Q9H7B4 428 aa11.24□□□□□ -0.61
RTN3-208ENST00000537981 ZFYVE28Q9HCC9 887 aa11.24□□□□□ -0.61
RTN3-208ENST00000537981 SLC17A7Q9P2U7 560 aa11.24□□□□□ -0.61
RTN3-208ENST00000537981 PCDHA4Q9UN74 947 aa11.24□□□□□ -0.61
RTN3-208ENST00000537981 HBS1LQ9Y450 684 aaKnown RBP11.24□□□□□ -0.61
RTN3-208ENST00000537981 CEPT1Q9Y6K0 416 aa11.24□□□□□ -0.61
RTN3-208ENST00000537981 A0A0A6YYK5 440 aaPredicted RBP11.24□□□□□ -0.61
RTN3-208ENST00000537981 FAM237BA0A1B0GVD1 139 aa11.24□□□□□ -0.61
RTN3-208ENST00000537981 A8MXQ7 604 aa11.24□□□□□ -0.61
RTN3-208ENST00000537981 ZWINTO95229 277 aa11.24□□□□□ -0.61
RTN3-208ENST00000537981 CDH2P19022 906 aaPredicted RBP11.24□□□□□ -0.61
RTN3-208ENST00000537981 TNNI2P48788 182 aa11.24□□□□□ -0.61
RTN3-208ENST00000537981 ARL4CP56559 192 aa11.24□□□□□ -0.61
RTN3-208ENST00000537981 COASYQ13057 564 aa11.24□□□□□ -0.61
RTN3-208ENST00000537981 RASGRF1Q13972 1273 aa11.24□□□□□ -0.61
RTN3-208ENST00000537981 PDK1Q15118 436 aa11.24□□□□□ -0.61
RTN3-208ENST00000537981 C10orf76Q5T2E6 689 aa11.24□□□□□ -0.61
RTN3-208ENST00000537981 ZNF746Q6NUN9 644 aaPredicted RBP11.24□□□□□ -0.61
RTN3-208ENST00000537981 ANO5Q75V66 913 aa11.24□□□□□ -0.61
RTN3-208ENST00000537981 AMIGO2Q86SJ2 522 aa11.24□□□□□ -0.61
RTN3-208ENST00000537981 ZNF410Q86VK4 478 aa11.24□□□□□ -0.61
RTN3-208ENST00000537981 MYOCDQ8IZQ8 938 aa11.24□□□□□ -0.61
RTN3-208ENST00000537981 ZNF713Q8N859 430 aaPredicted RBP11.24□□□□□ -0.61
RTN3-208ENST00000537981 LARP4BQ92615 738 aaKnown RBP11.24□□□□□ -0.61
RTN3-208ENST00000537981 DNAJC18Q9H819 358 aa11.24□□□□□ -0.61
RTN3-208ENST00000537981 SLC38A7Q9NVC3 462 aa11.24□□□□□ -0.61
RTN3-208ENST00000537981 TBCCD1Q9NVR7 557 aa11.24□□□□□ -0.61
RTN3-208ENST00000537981 PARP2Q9UGN5 583 aa11.24□□□□□ -0.61
RTN3-208ENST00000537981 HDAC9Q9UKV0 1011 aa11.24□□□□□ -0.61
RTN3-208ENST00000537981 CLDN3O15551 220 aa11.23□□□□□ -0.61
RTN3-208ENST00000537981 BANF1O75531 89 aa11.23□□□□□ -0.61
RTN3-208ENST00000537981 OR52Z1P0C646 297 aa11.23□□□□□ -0.61
RTN3-208ENST00000537981 KRT15P19012 456 aa11.23□□□□□ -0.61
RTN3-208ENST00000537981 CASP5P51878 434 aa11.23□□□□□ -0.61
RTN3-208ENST00000537981 CYTH1Q15438 398 aa11.23□□□□□ -0.61
RTN3-208ENST00000537981 TRIP10Q15642 601 aa11.23□□□□□ -0.61
RTN3-208ENST00000537981 PDCD4Q53EL6 469 aaKnown RBP11.23□□□□□ -0.61
RTN3-208ENST00000537981 FASTKD5Q7L8L6 764 aaKnown RBP11.23□□□□□ -0.61
RTN3-208ENST00000537981 ANKRD35Q8N283 1001 aa11.23□□□□□ -0.61
RTN3-208ENST00000537981 DDX55Q8NHQ9 600 aaKnown RBP eCLIP11.23□□□□□ -0.611e-10■■■□□ 14.8
RTN3-208ENST00000537981 SLC30A5Q8TAD4 765 aa11.23□□□□□ -0.61
RTN3-208ENST00000537981 CCDC124Q96CT7 223 aaKnown RBP11.23□□□□□ -0.61
RTN3-208ENST00000537981 CNBD2Q96M20 576 aa11.23□□□□□ -0.61
RTN3-208ENST00000537981 UCN2Q96RP3 112 aa11.23□□□□□ -0.61
RTN3-208ENST00000537981 ZNF395Q9H8N7 513 aaPredicted RBP11.23□□□□□ -0.61
RTN3-208ENST00000537981 SLC52A2Q9HAB3 445 aa11.23□□□□□ -0.61
RTN3-208ENST00000537981 ATAD3AQ9NVI7 634 aa11.23□□□□□ -0.61
RTN3-208ENST00000537981 ZDHHC7Q9NXF8 308 aa11.23□□□□□ -0.61
RTN3-208ENST00000537981 COQ6Q9Y2Z9 468 aa11.23□□□□□ -0.61
RTN3-208ENST00000537981 K7EPI3 171 aa11.23□□□□□ -0.61
RTN3-208ENST00000537981 DGKIO75912 1065 aa11.23□□□□□ -0.61
RTN3-208ENST00000537981 TMED10P49755 219 aaKnown RBP11.23□□□□□ -0.61
RTN3-208ENST00000537981 JAM2P57087 298 aa11.23□□□□□ -0.61
RTN3-208ENST00000537981 MTM1Q13496 603 aa11.23□□□□□ -0.61
RTN3-208ENST00000537981 ATP1A4Q13733 1029 aa11.23□□□□□ -0.61
RTN3-208ENST00000537981 SLC26A7Q8TE54 656 aa11.23□□□□□ -0.61
RTN3-208ENST00000537981 CASP10Q92851 521 aa11.23□□□□□ -0.61
RTN3-208ENST00000537981 MTBPQ96DY7 904 aa11.23□□□□□ -0.61
RTN3-208ENST00000537981 TSG101Q99816 390 aa11.23□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 34.6 ms