RNA–Protein interactions for RNA: ENST00000535997.6

CHMP1A-202, Transcript of charged multivesicular body protein 1A, humanhuman

TSL 2 BASIC

Gene CHMP1A, Length 2,295 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP1A-202ENST00000535997 CCDC63Q8NA47 563 aa16.94■□□□□ 0.3
CHMP1A-202ENST00000535997 FHDC1Q9C0D6 1143 aaPredicted RBP16.94■□□□□ 0.3
CHMP1A-202ENST00000535997 UBN1Q9NPG3 1134 aa16.94■□□□□ 0.3
CHMP1A-202ENST00000535997 ABCF3Q9NUQ8 709 aa16.94■□□□□ 0.3
CHMP1A-202ENST00000535997 DDX56Q9NY93 547 aaKnown RBP16.94■□□□□ 0.3
CHMP1A-202ENST00000535997 TPX2Q9ULW0 747 aaKnown RBP16.94■□□□□ 0.3
CHMP1A-202ENST00000535997 SIP14410 1827 aa16.94■□□□□ 0.3
CHMP1A-202ENST00000535997 RASA4BC9J798 803 aa16.94■□□□□ 0.3
CHMP1A-202ENST00000535997 F8VP50 259 aa16.94■□□□□ 0.3
CHMP1A-202ENST00000535997 RASA4O43374 803 aa16.94■□□□□ 0.3
CHMP1A-202ENST00000535997 MAFO75444 373 aaPredicted RBP16.94■□□□□ 0.3
CHMP1A-202ENST00000535997 GH1P01241 217 aa16.94■□□□□ 0.3
CHMP1A-202ENST00000535997 ATF7P17544 494 aaPredicted RBP16.94■□□□□ 0.3
CHMP1A-202ENST00000535997 MORF4L2Q15014 288 aa16.94■□□□□ 0.3
CHMP1A-202ENST00000535997 DUOXA2Q1HG44 320 aa16.94■□□□□ 0.3
CHMP1A-202ENST00000535997 GALNTL6Q49A17 601 aa16.94■□□□□ 0.3
CHMP1A-202ENST00000535997 SEZ6Q53EL9 994 aa16.94■□□□□ 0.3
CHMP1A-202ENST00000535997 DNAJC24Q6P3W2 148 aa16.94■□□□□ 0.3
CHMP1A-202ENST00000535997 SPOCD1Q6ZMY3 1216 aa16.94■□□□□ 0.3
CHMP1A-202ENST00000535997 SPATA21Q7Z572 469 aa16.94■□□□□ 0.3
CHMP1A-202ENST00000535997 GRAMD1AQ96CP6 724 aa16.94■□□□□ 0.3
CHMP1A-202ENST00000535997 TGS1Q96RS0 853 aaKnown RBP16.94■□□□□ 0.3
CHMP1A-202ENST00000535997 TCHPQ9BT92 498 aa16.94■□□□□ 0.3
CHMP1A-202ENST00000535997 FAM189A1O60320 539 aa16.93■□□□□ 0.3
CHMP1A-202ENST00000535997 KRT1P04264 644 aa16.93■□□□□ 0.3
CHMP1A-202ENST00000535997 TCF4P15884 667 aa16.93■□□□□ 0.3
CHMP1A-202ENST00000535997 CDH5P33151 784 aaPredicted RBP16.93■□□□□ 0.3
CHMP1A-202ENST00000535997 ARSEP51690 589 aa16.93■□□□□ 0.3
CHMP1A-202ENST00000535997 STAT5BP51692 787 aa16.93■□□□□ 0.3
CHMP1A-202ENST00000535997 SLC18A1P54219 525 aa16.93■□□□□ 0.3
CHMP1A-202ENST00000535997 ZNF252P-AS1Q0IIN9 211 aa16.93■□□□□ 0.3
CHMP1A-202ENST00000535997 SURF1Q15526 300 aa16.93■□□□□ 0.3
CHMP1A-202ENST00000535997 CCDC142Q17RM4 750 aa16.93■□□□□ 0.3
CHMP1A-202ENST00000535997 FAM133BQ5BKY9 247 aaKnown RBP16.93■□□□□ 0.3
CHMP1A-202ENST00000535997 TFDP3Q5H9I0 405 aa16.93■□□□□ 0.3
CHMP1A-202ENST00000535997 PPP1R15BQ5SWA1 713 aa16.93■□□□□ 0.3
CHMP1A-202ENST00000535997 PRUNE1Q86TP1 453 aa16.93■□□□□ 0.3
CHMP1A-202ENST00000535997 NIPA2Q8N8Q9 360 aa16.93■□□□□ 0.3
CHMP1A-202ENST00000535997 GDAP1Q8TB36 358 aa16.93■□□□□ 0.3
CHMP1A-202ENST00000535997 PRPF31Q8WWY3 499 aaKnown RBP16.93■□□□□ 0.3
CHMP1A-202ENST00000535997 NKD2Q969F2 451 aaPredicted RBP16.93■□□□□ 0.3
CHMP1A-202ENST00000535997 KLRG1Q96E93 195 aa16.93■□□□□ 0.3
CHMP1A-202ENST00000535997 MCEEQ96PE7 176 aa16.93■□□□□ 0.3
CHMP1A-202ENST00000535997 PCYT2Q99447 389 aa16.93■□□□□ 0.3
CHMP1A-202ENST00000535997 MRPL4Q9BYD3 311 aaKnown RBP16.93■□□□□ 0.3
CHMP1A-202ENST00000535997 MLXIPLQ9NP71 852 aa16.93■□□□□ 0.3
CHMP1A-202ENST00000535997 SAYSD1Q9NPB0 183 aa16.93■□□□□ 0.3
CHMP1A-202ENST00000535997 CISHQ9NSE2 258 aa16.93■□□□□ 0.3
CHMP1A-202ENST00000535997 PRKAG3Q9UGI9 489 aa16.93■□□□□ 0.3
CHMP1A-202ENST00000535997 FAM47DPA6NHR8 397 aa16.93■□□□□ 0.3
CHMP1A-202ENST00000535997 MSCO60682 206 aa16.93■□□□□ 0.3
CHMP1A-202ENST00000535997 ITGAVP06756 1048 aa16.93■□□□□ 0.3
CHMP1A-202ENST00000535997 IL9RQ01113 521 aa16.93■□□□□ 0.3
CHMP1A-202ENST00000535997 CNTN2Q02246 1040 aa16.93■□□□□ 0.3
CHMP1A-202ENST00000535997 FSTL1Q12841 308 aa16.93■□□□□ 0.3
CHMP1A-202ENST00000535997 FAM160B1Q5W0V3 765 aa16.93■□□□□ 0.3
CHMP1A-202ENST00000535997 CYP4F22Q6NT55 531 aa16.93■□□□□ 0.3
CHMP1A-202ENST00000535997 FAM228AQ86W67 206 aa16.93■□□□□ 0.3
CHMP1A-202ENST00000535997 GLIS1Q8NBF1 620 aa16.93■□□□□ 0.3
CHMP1A-202ENST00000535997 NIF3L1Q9GZT8 377 aa16.93■□□□□ 0.3
CHMP1A-202ENST00000535997 KLHL11Q9NVR0 708 aa16.93■□□□□ 0.3
CHMP1A-202ENST00000535997 PCDHGC3Q9UN70 934 aa16.93■□□□□ 0.3
CHMP1A-202ENST00000535997 PPME1Q9Y570 386 aa16.93■□□□□ 0.3
CHMP1A-202ENST00000535997 EXOC1LA0A1B0GW35 172 aa16.92■□□□□ 0.3
CHMP1A-202ENST00000535997 NFKBIEO00221 500 aa16.92■□□□□ 0.3
CHMP1A-202ENST00000535997 ALOX15BO15296 676 aa16.92■□□□□ 0.3
CHMP1A-202ENST00000535997 FARP2O94887 1054 aaPredicted RBP16.92■□□□□ 0.3
CHMP1A-202ENST00000535997 UBOX5O94941 541 aa16.92■□□□□ 0.3
CHMP1A-202ENST00000535997 HARSP12081 509 aaKnown RBP16.92■□□□□ 0.3
CHMP1A-202ENST00000535997 SLC8A1P32418 973 aa16.92■□□□□ 0.3
CHMP1A-202ENST00000535997 VCPP55072 806 aaKnown RBP16.92■□□□□ 0.3
CHMP1A-202ENST00000535997 MYL6P60660 151 aa16.92■□□□□ 0.3
CHMP1A-202ENST00000535997 GPS1Q13098 491 aa16.92■□□□□ 0.3
CHMP1A-202ENST00000535997 RIPK1Q13546 671 aa16.92■□□□□ 0.3
CHMP1A-202ENST00000535997 NEDD9Q14511 834 aa16.92■□□□□ 0.3
CHMP1A-202ENST00000535997 OASLQ15646 514 aaKnown RBP16.92■□□□□ 0.3
CHMP1A-202ENST00000535997 SCARA3Q6AZY7 606 aa16.92■□□□□ 0.3
CHMP1A-202ENST00000535997 ERICH1Q86X53 443 aa16.92■□□□□ 0.3
CHMP1A-202ENST00000535997 WDTC1Q8N5D0 677 aa16.92■□□□□ 0.3
CHMP1A-202ENST00000535997 YY1AP1Q9H869 796 aa16.92■□□□□ 0.3
CHMP1A-202ENST00000535997 PPCSQ9HAB8 311 aa16.92■□□□□ 0.3
CHMP1A-202ENST00000535997 EFR3BQ9Y2G0 817 aa16.92■□□□□ 0.3
CHMP1A-202ENST00000535997 AFG3L2Q9Y4W6 797 aa16.92■□□□□ 0.3
CHMP1A-202ENST00000535997 CEP83Q9Y592 693 aa16.92■□□□□ 0.3
CHMP1A-202ENST00000535997 hCG_1818297A0A087WSY0 165 aa16.91■□□□□ 0.3
CHMP1A-202ENST00000535997 TGFB3P10600 412 aa16.91■□□□□ 0.3
CHMP1A-202ENST00000535997 UBA1P22314 1058 aaKnown RBP16.91■□□□□ 0.3
CHMP1A-202ENST00000535997 TNFSF9P41273 254 aa16.91■□□□□ 0.3
CHMP1A-202ENST00000535997 CDKN2BP42772 138 aa16.91■□□□□ 0.3
CHMP1A-202ENST00000535997 BNIP1Q12981 228 aa16.91■□□□□ 0.3
CHMP1A-202ENST00000535997 MTFR1Q15390 333 aa16.91■□□□□ 0.3
CHMP1A-202ENST00000535997 WLSQ5T9L3 541 aa16.91■□□□□ 0.3
CHMP1A-202ENST00000535997 PRAMEF18Q5VWM3 479 aa16.91■□□□□ 0.3
CHMP1A-202ENST00000535997 IER5Q5VY09 327 aa16.91■□□□□ 0.3
CHMP1A-202ENST00000535997 GPAT2Q6NUI2 795 aa16.91■□□□□ 0.3
CHMP1A-202ENST00000535997 POLNQ7Z5Q5 900 aa16.91■□□□□ 0.3
CHMP1A-202ENST00000535997 TRABD2AQ86V40 505 aa16.91■□□□□ 0.3
CHMP1A-202ENST00000535997 APOBEC3FQ8IUX4 373 aaKnown RBP16.91■□□□□ 0.3
CHMP1A-202ENST00000535997 TACO1Q9BSH4 297 aaKnown RBP16.91■□□□□ 0.3
CHMP1A-202ENST00000535997 TTLL13PA6NNM8 815 aa16.91■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 38.1 ms