RNA–Protein interactions for RNA: ENST00000535326.1

PRPF19-202, Transcript of pre-mRNA processing factor 19, humanhuman

TSL 5

Gene PRPF19, Length 779 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF19-202ENST00000535326 PROSCO94903 275 aa13.69□□□□□ -0.22
PRPF19-202ENST00000535326 HSPA1AP0DMV8 641 aaKnown RBP13.69□□□□□ -0.22
PRPF19-202ENST00000535326 HSPA1BP0DMV9 641 aaKnown RBP13.69□□□□□ -0.22
PRPF19-202ENST00000535326 CTGFP29279 349 aa13.69□□□□□ -0.22
PRPF19-202ENST00000535326 HOXC8P31273 242 aa13.69□□□□□ -0.22
PRPF19-202ENST00000535326 CDH5P33151 784 aaPredicted RBP13.69□□□□□ -0.22
PRPF19-202ENST00000535326 SSR1P43307 286 aaKnown RBP13.69□□□□□ -0.22
PRPF19-202ENST00000535326 RAD23BP54727 409 aa13.69□□□□□ -0.22
PRPF19-202ENST00000535326 ZNF200P98182 395 aaPredicted RBP13.69□□□□□ -0.22
PRPF19-202ENST00000535326 PRKCZQ05513 592 aa13.69□□□□□ -0.22
PRPF19-202ENST00000535326 NNTQ13423 1086 aa13.69□□□□□ -0.22
PRPF19-202ENST00000535326 MAMLD1Q13495 774 aa13.69□□□□□ -0.22
PRPF19-202ENST00000535326 CUL1Q13616 776 aa13.69□□□□□ -0.22
PRPF19-202ENST00000535326 CASP8Q14790 479 aa13.69□□□□□ -0.22
PRPF19-202ENST00000535326 STILQ15468 1287 aa13.69□□□□□ -0.22
PRPF19-202ENST00000535326 SGO2Q562F6 1265 aa13.69□□□□□ -0.22
PRPF19-202ENST00000535326 HSP90B2PQ58FF3 399 aa13.69□□□□□ -0.22
PRPF19-202ENST00000535326 DCAF12L1Q5VU92 463 aa13.69□□□□□ -0.22
PRPF19-202ENST00000535326 PLEKHA7Q6IQ23 1121 aa13.69□□□□□ -0.22
PRPF19-202ENST00000535326 DCUN1D2Q6PH85 259 aa13.69□□□□□ -0.22
PRPF19-202ENST00000535326 LRRC52Q8N7C0 313 aa13.69□□□□□ -0.22
PRPF19-202ENST00000535326 FEZF2Q8TBJ5 459 aa13.69□□□□□ -0.22
PRPF19-202ENST00000535326 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP13.69□□□□□ -0.22
PRPF19-202ENST00000535326 KRT35Q92764 455 aa13.69□□□□□ -0.22
PRPF19-202ENST00000535326 CD101Q93033 1021 aa13.69□□□□□ -0.22
PRPF19-202ENST00000535326 CELF4Q9BZC1 486 aaKnown RBP13.69□□□□□ -0.22
PRPF19-202ENST00000535326 ARHGAP39Q9C0H5 1083 aa13.69□□□□□ -0.22
PRPF19-202ENST00000535326 RAB17Q9H0T7 212 aa13.69□□□□□ -0.22
PRPF19-202ENST00000535326 LHX5Q9H2C1 402 aa13.69□□□□□ -0.22
PRPF19-202ENST00000535326 VIPAS39Q9H9C1 493 aa13.69□□□□□ -0.22
PRPF19-202ENST00000535326 CDHR5Q9HBB8 845 aa13.69□□□□□ -0.22
PRPF19-202ENST00000535326 EPB41L5Q9HCM4 733 aa13.69□□□□□ -0.22
PRPF19-202ENST00000535326 XPNPEP3Q9NQH7 507 aa13.69□□□□□ -0.22
PRPF19-202ENST00000535326 SLTMQ9NWH9 1034 aaKnown RBP eCLIP13.69□□□□□ -0.22
PRPF19-202ENST00000535326 SAGE1Q9NXZ1 904 aa13.69□□□□□ -0.22
PRPF19-202ENST00000535326 CNTN3Q9P232 1028 aa13.69□□□□□ -0.22
PRPF19-202ENST00000535326 PARP2Q9UGN5 583 aa13.69□□□□□ -0.22
PRPF19-202ENST00000535326 DMGDHQ9UI17 866 aaKnown RBP13.69□□□□□ -0.22
PRPF19-202ENST00000535326 BARX2Q9UMQ3 279 aaPredicted RBP13.69□□□□□ -0.22
PRPF19-202ENST00000535326 UTP11Q9Y3A2 253 aaKnown RBP13.69□□□□□ -0.22
PRPF19-202ENST00000535326 HTTP42858 3142 aa13.69□□□□□ -0.22
PRPF19-202ENST00000535326 MYADML2A6NDP7 307 aa13.68□□□□□ -0.22
PRPF19-202ENST00000535326 M0QYV0 167 aa13.68□□□□□ -0.22
PRPF19-202ENST00000535326 MAP2K7O14733 419 aa13.68□□□□□ -0.22
PRPF19-202ENST00000535326 MEFVO15553 781 aaPredicted RBP13.68□□□□□ -0.22
PRPF19-202ENST00000535326 SART1O43290 800 aaKnown RBP13.68□□□□□ -0.22
PRPF19-202ENST00000535326 PHF2O75151 1096 aa13.68□□□□□ -0.22
PRPF19-202ENST00000535326 CFHP08603 1231 aa13.68□□□□□ -0.22
PRPF19-202ENST00000535326 VDRP11473 427 aa13.68□□□□□ -0.22
PRPF19-202ENST00000535326 PNPLA4P41247 253 aa13.68□□□□□ -0.22
PRPF19-202ENST00000535326 GUCY2FP51841 1108 aa13.68□□□□□ -0.22
PRPF19-202ENST00000535326 CDH8P55286 799 aa13.68□□□□□ -0.22
PRPF19-202ENST00000535326 IRX5P78411 483 aaPredicted RBP13.68□□□□□ -0.22
PRPF19-202ENST00000535326 CBX1P83916 185 aa13.68□□□□□ -0.22
PRPF19-202ENST00000535326 SP3Q02447 781 aa13.68□□□□□ -0.22
PRPF19-202ENST00000535326 INCA1Q0VD86 236 aa13.68□□□□□ -0.22
PRPF19-202ENST00000535326 DHX34Q14147 1143 aaKnown RBP13.68□□□□□ -0.22
PRPF19-202ENST00000535326 NBPF20Q3BBV1 942 aa13.68□□□□□ -0.22
PRPF19-202ENST00000535326 ODF2Q5BJF6 829 aa13.68□□□□□ -0.22
PRPF19-202ENST00000535326 TWF2Q6IBS0 349 aaKnown RBP13.68□□□□□ -0.22
PRPF19-202ENST00000535326 PHLDB2Q86SQ0 1253 aa13.68□□□□□ -0.22
PRPF19-202ENST00000535326 RHOT1Q8IXI2 618 aa13.68□□□□□ -0.22
PRPF19-202ENST00000535326 EIF1ADQ8N9N8 165 aaKnown RBP13.68□□□□□ -0.22
PRPF19-202ENST00000535326 SLC4A11Q8NBS3 891 aa13.68□□□□□ -0.22
PRPF19-202ENST00000535326 IPO4Q8TEX9 1081 aaKnown RBP13.68□□□□□ -0.22
PRPF19-202ENST00000535326 HDAC7Q8WUI4 952 aa13.68□□□□□ -0.22
PRPF19-202ENST00000535326 IFT81Q8WYA0 676 aa13.68□□□□□ -0.22
PRPF19-202ENST00000535326 HEXIM2Q96MH2 286 aaKnown RBP13.68□□□□□ -0.22
PRPF19-202ENST00000535326 NT5C1AQ9BXI3 368 aa13.68□□□□□ -0.22
PRPF19-202ENST00000535326 DDX47Q9H0S4 455 aaKnown RBP13.68□□□□□ -0.22
PRPF19-202ENST00000535326 NXF3Q9H4D5 531 aaKnown RBP13.68□□□□□ -0.22
PRPF19-202ENST00000535326 GDF3Q9NR23 364 aa13.68□□□□□ -0.22
PRPF19-202ENST00000535326 RNF186Q9NXI6 227 aa13.68□□□□□ -0.22
PRPF19-202ENST00000535326 WDR35Q9P2L0 1181 aa13.68□□□□□ -0.22
PRPF19-202ENST00000535326 GTF2IRD1Q9UHL9 959 aa13.68□□□□□ -0.22
PRPF19-202ENST00000535326 GTF3C5Q9Y5Q8 519 aaPredicted RBP13.68□□□□□ -0.22
PRPF19-202ENST00000535326 PDCD11Q14690 1871 aaKnown RBP13.67□□□□□ -0.22
PRPF19-202ENST00000535326 TRIP12Q14669 1992 aaPredicted RBP13.67□□□□□ -0.22
PRPF19-202ENST00000535326 FAM187AA6NFU0 413 aa13.67□□□□□ -0.22
PRPF19-202ENST00000535326 PGK1P00558 417 aa13.67□□□□□ -0.22
PRPF19-202ENST00000535326 HMGCRP04035 888 aa13.67□□□□□ -0.22
PRPF19-202ENST00000535326 MYCNP04198 464 aaPredicted RBP13.67□□□□□ -0.22
PRPF19-202ENST00000535326 CHRNA3P32297 505 aa13.67□□□□□ -0.22
PRPF19-202ENST00000535326 MARCKSL1P49006 195 aa13.67□□□□□ -0.22
PRPF19-202ENST00000535326 PEX5P50542 639 aa13.67□□□□□ -0.22
PRPF19-202ENST00000535326 SNX16P57768 344 aa13.67□□□□□ -0.22
PRPF19-202ENST00000535326 MRPS25P82663 173 aaKnown RBP13.67□□□□□ -0.22
PRPF19-202ENST00000535326 PTP4A2Q12974 167 aa13.67□□□□□ -0.22
PRPF19-202ENST00000535326 HIC1Q14526 733 aa13.67□□□□□ -0.22
PRPF19-202ENST00000535326 HLTFQ14527 1009 aaKnown RBP eCLIP13.67□□□□□ -0.22
PRPF19-202ENST00000535326 SCARA3Q6AZY7 606 aa13.67□□□□□ -0.22
PRPF19-202ENST00000535326 DENND1BQ6P3S1 775 aa13.67□□□□□ -0.22
PRPF19-202ENST00000535326 CXCL17Q6UXB2 119 aa13.67□□□□□ -0.22
PRPF19-202ENST00000535326 SND1Q7KZF4 910 aaKnown RBP eCLIP13.67□□□□□ -0.225e-9■■■■□ 20.2
PRPF19-202ENST00000535326 GSPT2Q8IYD1 628 aaKnown RBP13.67□□□□□ -0.22
PRPF19-202ENST00000535326 PCSK9Q8NBP7 692 aaKnown RBP13.67□□□□□ -0.22
PRPF19-202ENST00000535326 C3orf20Q8ND61 904 aa13.67□□□□□ -0.22
PRPF19-202ENST00000535326 CXorf38Q8TB03 319 aa13.67□□□□□ -0.22
PRPF19-202ENST00000535326 WHAMMQ8TF30 809 aa13.67□□□□□ -0.22
PRPF19-202ENST00000535326 AENQ8WTP8 325 aaKnown RBP13.67□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms