RNA–Protein interactions for RNA: ENST00000533897.1

CTSC-208, Transcript of cathepsin C, humanhuman

TSL 2

Gene CTSC, Length 4,344 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSC-208ENST00000533897 TEX44Q53QW1 395 aa4.68□□□□□ -1.66
CTSC-208ENST00000533897 SLC45A4Q5BKX6 768 aa4.68□□□□□ -1.66
CTSC-208ENST00000533897 FNBP1LQ5T0N5 605 aa4.68□□□□□ -1.66
CTSC-208ENST00000533897 FOXB2Q5VYV0 432 aa4.68□□□□□ -1.66
CTSC-208ENST00000533897 IZUMO3Q5VZ72 239 aa4.68□□□□□ -1.66
CTSC-208ENST00000533897 NUGGCQ68CJ6 796 aa4.68□□□□□ -1.66
CTSC-208ENST00000533897 XRRA1Q6P2D8 792 aa4.68□□□□□ -1.66
CTSC-208ENST00000533897 TRIM72Q6ZMU5 477 aa4.68□□□□□ -1.66
CTSC-208ENST00000533897 POLNQ7Z5Q5 900 aa4.68□□□□□ -1.66
CTSC-208ENST00000533897 CHSY1Q86X52 802 aa4.68□□□□□ -1.66
CTSC-208ENST00000533897 KIF2BQ8N4N8 673 aa4.68□□□□□ -1.66
CTSC-208ENST00000533897 CPT1BQ92523 772 aa4.68□□□□□ -1.66
CTSC-208ENST00000533897 AZIN2Q96A70 460 aa4.68□□□□□ -1.66
CTSC-208ENST00000533897 TRIM11Q96F44 468 aa4.68□□□□□ -1.66
CTSC-208ENST00000533897 NT5C1BQ96P26 610 aa4.68□□□□□ -1.66
CTSC-208ENST00000533897 XYLT2Q9H1B5 865 aa4.68□□□□□ -1.66
CTSC-208ENST00000533897 RNPEPL1Q9HAU8 725 aa4.68□□□□□ -1.66
CTSC-208ENST00000533897 VEZTQ9HBM0 779 aa4.68□□□□□ -1.66
CTSC-208ENST00000533897 MKS1Q9NXB0 559 aa4.68□□□□□ -1.66
CTSC-208ENST00000533897 DDX43Q9NXZ2 648 aaKnown RBP4.68□□□□□ -1.66
CTSC-208ENST00000533897 SAMD15Q9P1V8 674 aa4.68□□□□□ -1.66
CTSC-208ENST00000533897 PHTF1Q9UMS5 762 aa4.68□□□□□ -1.66
CTSC-208ENST00000533897 SHOC2Q9UQ13 582 aa4.68□□□□□ -1.66
CTSC-208ENST00000533897 RIPK3Q9Y572 518 aa4.68□□□□□ -1.66
CTSC-208ENST00000533897 TRIP11Q15643 1979 aa4.67□□□□□ -1.66
CTSC-208ENST00000533897 TMEM110-MUSTN1A8MSY1 372 aa4.67□□□□□ -1.66
CTSC-208ENST00000533897 WDR46O15213 610 aaKnown RBP4.67□□□□□ -1.66
CTSC-208ENST00000533897 TGDSO95455 350 aa4.67□□□□□ -1.66
CTSC-208ENST00000533897 CLTAP09496 248 aa4.67□□□□□ -1.66
CTSC-208ENST00000533897 ZSCAN5DPP0CG00 497 aa4.67□□□□□ -1.66
CTSC-208ENST00000533897 ATP5DP30049 168 aa4.67□□□□□ -1.66
CTSC-208ENST00000533897 MAPK4P31152 587 aa4.67□□□□□ -1.66
CTSC-208ENST00000533897 GABRB2P47870 512 aa4.67□□□□□ -1.66
CTSC-208ENST00000533897 NFX1Q12986 1120 aaKnown RBP4.67□□□□□ -1.66
CTSC-208ENST00000533897 NR1H3Q13133 447 aa4.67□□□□□ -1.66
CTSC-208ENST00000533897 CUL2Q13617 745 aa4.67□□□□□ -1.66
CTSC-208ENST00000533897 ANKRD22Q5VYY1 191 aa4.67□□□□□ -1.66
CTSC-208ENST00000533897 ATG14Q6ZNE5 492 aa4.67□□□□□ -1.66
CTSC-208ENST00000533897 IGDCC3Q8IVU1 814 aa4.67□□□□□ -1.66
CTSC-208ENST00000533897 RHOT1Q8IXI2 618 aa4.67□□□□□ -1.66
CTSC-208ENST00000533897 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP4.67□□□□□ -1.66
CTSC-208ENST00000533897 PPM1KQ8N3J5 372 aa4.67□□□□□ -1.66
CTSC-208ENST00000533897 KIFAP3Q92845 792 aa4.67□□□□□ -1.66
CTSC-208ENST00000533897 GPRASP2Q96D09 838 aa4.67□□□□□ -1.66
CTSC-208ENST00000533897 PRR11Q96HE9 360 aaPredicted RBP4.67□□□□□ -1.66
CTSC-208ENST00000533897 PCYT2Q99447 389 aa4.67□□□□□ -1.66
CTSC-208ENST00000533897 SH2D3AQ9BRG2 576 aa4.67□□□□□ -1.66
CTSC-208ENST00000533897 NIFKQ9BYG3 293 aaKnown RBP4.67□□□□□ -1.66
CTSC-208ENST00000533897 PTPRHQ9HD43 1115 aa4.67□□□□□ -1.66
CTSC-208ENST00000533897 ZNF112Q9UJU3 913 aa4.67□□□□□ -1.66
CTSC-208ENST00000533897 ANAPC5Q9UJX4 755 aa4.67□□□□□ -1.66
CTSC-208ENST00000533897 TCRBV7S3A2A0A539 114 aa4.67□□□□□ -1.66
CTSC-208ENST00000533897 HMX2A2RU54 273 aa4.67□□□□□ -1.66
CTSC-208ENST00000533897 ANKRD33BA6NCL7 494 aa4.67□□□□□ -1.66
CTSC-208ENST00000533897 CALB2P22676 271 aa4.67□□□□□ -1.66
CTSC-208ENST00000533897 GLRA2P23416 452 aa4.67□□□□□ -1.66
CTSC-208ENST00000533897 PAX7P23759 505 aa4.67□□□□□ -1.66
CTSC-208ENST00000533897 IL1R2P27930 398 aa4.67□□□□□ -1.66
CTSC-208ENST00000533897 CCNFP41002 786 aa4.67□□□□□ -1.66
CTSC-208ENST00000533897 ASPAP45381 313 aa4.67□□□□□ -1.66
CTSC-208ENST00000533897 CSRP3P50461 194 aa4.67□□□□□ -1.66
CTSC-208ENST00000533897 VCPP55072 806 aaKnown RBP4.67□□□□□ -1.66
CTSC-208ENST00000533897 RPS6P62753 249 aaKnown RBP4.67□□□□□ -1.66
CTSC-208ENST00000533897 CDK18Q07002 472 aa4.67□□□□□ -1.66
CTSC-208ENST00000533897 STRN3Q13033 797 aa4.67□□□□□ -1.66
CTSC-208ENST00000533897 TUBB3Q13509 450 aa4.67□□□□□ -1.66
CTSC-208ENST00000533897 SNX1Q13596 522 aa4.67□□□□□ -1.66
CTSC-208ENST00000533897 EFTUD2Q15029 972 aaKnown RBP eCLIP4.67□□□□□ -1.66
CTSC-208ENST00000533897 E2F5Q15329 346 aa4.67□□□□□ -1.66
CTSC-208ENST00000533897 P3H1Q32P28 736 aa4.67□□□□□ -1.66
CTSC-208ENST00000533897 C2CD6Q53TS8 623 aa4.67□□□□□ -1.66
CTSC-208ENST00000533897 WASHC2DQ5SRD0 308 aa4.67□□□□□ -1.66
CTSC-208ENST00000533897 MSL1Q68DK7 614 aa4.67□□□□□ -1.66
CTSC-208ENST00000533897 OR52E8Q6IFG1 317 aa4.67□□□□□ -1.66
CTSC-208ENST00000533897 SPOPLQ6IQ16 392 aa4.67□□□□□ -1.66
CTSC-208ENST00000533897 TRNP1Q6NT89 227 aa4.67□□□□□ -1.66
CTSC-208ENST00000533897 MFSD7Q6UXD7 560 aa4.67□□□□□ -1.66
CTSC-208ENST00000533897 PPP1R21Q6ZMI0 780 aa4.67□□□□□ -1.66
CTSC-208ENST00000533897 SPOCD1Q6ZMY3 1216 aa4.67□□□□□ -1.66
CTSC-208ENST00000533897 ARHGEF18Q6ZSZ5 1173 aa4.67□□□□□ -1.66
CTSC-208ENST00000533897 CLNKQ7Z7G1 428 aa4.67□□□□□ -1.66
CTSC-208ENST00000533897 CCDC89Q8N998 374 aa4.67□□□□□ -1.66
CTSC-208ENST00000533897 RBM15Q96T37 977 aaKnown RBP eCLIP4.67□□□□□ -1.66
CTSC-208ENST00000533897 TBC1D10AQ9BXI6 508 aa4.67□□□□□ -1.66
CTSC-208ENST00000533897 NSRP1Q9H0G5 558 aaKnown RBP4.67□□□□□ -1.66
CTSC-208ENST00000533897 DENND2DQ9H6A0 471 aaPredicted RBP4.67□□□□□ -1.66
CTSC-208ENST00000533897 PCDH9Q9HC56 1237 aa4.67□□□□□ -1.66
CTSC-208ENST00000533897 SAR1AQ9NR31 198 aa4.67□□□□□ -1.66
CTSC-208ENST00000533897 CD2APQ9Y5K6 639 aa4.67□□□□□ -1.66
CTSC-208ENST00000533897 WDR64B1ANS9 1081 aa4.67□□□□□ -1.66
CTSC-208ENST00000533897 SPATA31C2B4DYI2 1134 aa4.67□□□□□ -1.66
CTSC-208ENST00000533897 H0YHG0 523 aa4.67□□□□□ -1.66
CTSC-208ENST00000533897 TMEM63AO94886 807 aa4.67□□□□□ -1.66
CTSC-208ENST00000533897 LSM8O95777 96 aaKnown RBP4.67□□□□□ -1.66
CTSC-208ENST00000533897 ASS1P00966 412 aaKnown RBP4.67□□□□□ -1.66
CTSC-208ENST00000533897 HLA-DRAP01903 254 aa4.67□□□□□ -1.66
CTSC-208ENST00000533897 PRKCGP05129 697 aa4.67□□□□□ -1.66
CTSC-208ENST00000533897 MMP10P09238 476 aa4.67□□□□□ -1.66
CTSC-208ENST00000533897 ATF2P15336 505 aa4.67□□□□□ -1.66
CTSC-208ENST00000533897 ICAM3P32942 547 aa4.67□□□□□ -1.66
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms