RNA–Protein interactions for RNA: ENST00000533733.5

ATM-222, Transcript of ATM serine/threonine kinase, humanhuman

TSL 1 (best)

Gene ATM, Length 1,731 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATM-222ENST00000533733 AAASQ9NRG9 546 aa12.66□□□□□ -0.38
ATM-222ENST00000533733 TNFSF13BQ9Y275 285 aa12.66□□□□□ -0.38
ATM-222ENST00000533733 MGAMO43451 1857 aa12.66□□□□□ -0.38
ATM-222ENST00000533733 PLXNA1Q9UIW2 1896 aa12.66□□□□□ -0.38
ATM-222ENST00000533733 DNAJC25-GNG10A0A024R161 153 aa12.65□□□□□ -0.38
ATM-222ENST00000533733 SPDYE5A6NIY4 337 aa12.65□□□□□ -0.38
ATM-222ENST00000533733 DCDC2CA8MYV0 355 aa12.65□□□□□ -0.38
ATM-222ENST00000533733 TP73O15350 636 aa12.65□□□□□ -0.38
ATM-222ENST00000533733 CDH16O75309 829 aa12.65□□□□□ -0.38
ATM-222ENST00000533733 KRT7P08729 469 aa12.65□□□□□ -0.38
ATM-222ENST00000533733 HOXC6P09630 235 aa12.65□□□□□ -0.38
ATM-222ENST00000533733 WEE2P0C1S8 567 aa12.65□□□□□ -0.38
ATM-222ENST00000533733 P4HA1P13674 534 aa12.65□□□□□ -0.38
ATM-222ENST00000533733 KLRC2P26717 231 aa12.65□□□□□ -0.38
ATM-222ENST00000533733 TAS2R40P59535 323 aa12.65□□□□□ -0.38
ATM-222ENST00000533733 FSTL1Q12841 308 aa12.65□□□□□ -0.38
ATM-222ENST00000533733 MKRN3Q13064 507 aaKnown RBP12.65□□□□□ -0.38
ATM-222ENST00000533733 SNX1Q13596 522 aa12.65□□□□□ -0.38
ATM-222ENST00000533733 TTLL4Q14679 1199 aa12.65□□□□□ -0.38
ATM-222ENST00000533733 HADHQ16836 314 aaKnown RBP12.65□□□□□ -0.38
ATM-222ENST00000533733 NT5DC4Q86YG4 428 aa12.65□□□□□ -0.38
ATM-222ENST00000533733 IFNLR1Q8IU57 520 aaPredicted RBP12.65□□□□□ -0.38
ATM-222ENST00000533733 PASD1Q8IV76 773 aa12.65□□□□□ -0.38
ATM-222ENST00000533733 DHX37Q8IY37 1157 aaKnown RBP12.65□□□□□ -0.38
ATM-222ENST00000533733 ZCCHC9Q8N567 271 aaKnown RBP12.65□□□□□ -0.38
ATM-222ENST00000533733 UPF1Q92900 1129 aaKnown RBP eCLIP12.65□□□□□ -0.38
ATM-222ENST00000533733 CFAP57Q96MR6 1250 aa12.65□□□□□ -0.38
ATM-222ENST00000533733 SLITRK1Q96PX8 696 aa12.65□□□□□ -0.38
ATM-222ENST00000533733 TRIM7Q9C029 511 aa12.65□□□□□ -0.38
ATM-222ENST00000533733 MTMR12Q9C0I1 747 aa12.65□□□□□ -0.38
ATM-222ENST00000533733 ASCC2Q9H1I8 757 aaPredicted RBP12.65□□□□□ -0.38
ATM-222ENST00000533733 VRTNQ9H8Y1 702 aa12.65□□□□□ -0.38
ATM-222ENST00000533733 CYP3A43Q9HB55 503 aa12.65□□□□□ -0.38
ATM-222ENST00000533733 DDX20Q9UHI6 824 aaKnown RBP12.65□□□□□ -0.38
ATM-222ENST00000533733 FZD1Q9UP38 647 aa12.65□□□□□ -0.38
ATM-222ENST00000533733 COL1A2P08123 1366 aa12.65□□□□□ -0.38
ATM-222ENST00000533733 EVPLQ92817 2033 aa12.65□□□□□ -0.38
ATM-222ENST00000533733 MAGEB2O15479 319 aa12.65□□□□□ -0.38
ATM-222ENST00000533733 LIASO43766 372 aa12.65□□□□□ -0.38
ATM-222ENST00000533733 CNMDO75829 334 aa12.65□□□□□ -0.38
ATM-222ENST00000533733 CST3P01034 146 aaPredicted RBP12.65□□□□□ -0.38
ATM-222ENST00000533733 ITGAVP06756 1048 aa12.65□□□□□ -0.38
ATM-222ENST00000533733 HARSP12081 509 aaKnown RBP12.65□□□□□ -0.38
ATM-222ENST00000533733 DRD4P21917 467 aa12.65□□□□□ -0.38
ATM-222ENST00000533733 SSR1P43307 286 aaKnown RBP12.65□□□□□ -0.38
ATM-222ENST00000533733 PHKA2P46019 1235 aa12.65□□□□□ -0.38
ATM-222ENST00000533733 MYL6P60660 151 aa12.65□□□□□ -0.38
ATM-222ENST00000533733 LACTBP83111 547 aaPredicted RBP12.65□□□□□ -0.38
ATM-222ENST00000533733 MORF4L2Q15014 288 aa12.65□□□□□ -0.38
ATM-222ENST00000533733 LACTB2Q53H82 288 aaPredicted RBP12.65□□□□□ -0.38
ATM-222ENST00000533733 TFDP3Q5H9I0 405 aa12.65□□□□□ -0.38
ATM-222ENST00000533733 IZUMO3Q5VZ72 239 aa12.65□□□□□ -0.38
ATM-222ENST00000533733 HIBCHQ6NVY1 386 aaPredicted RBP12.65□□□□□ -0.38
ATM-222ENST00000533733 GSTA5Q7RTV2 222 aa12.65□□□□□ -0.38
ATM-222ENST00000533733 CCDC197Q8NCU1 140 aa12.65□□□□□ -0.38
ATM-222ENST00000533733 EPS8L3Q8TE67 593 aaKnown RBP12.65□□□□□ -0.38
ATM-222ENST00000533733 NKD2Q969F2 451 aaPredicted RBP12.65□□□□□ -0.38
ATM-222ENST00000533733 ZNF317Q96PQ6 595 aaPredicted RBP12.65□□□□□ -0.38
ATM-222ENST00000533733 MMP19Q99542 508 aa12.65□□□□□ -0.38
ATM-222ENST00000533733 ADAM7Q9H2U9 754 aa12.65□□□□□ -0.38
ATM-222ENST00000533733 KDM4CQ9H3R0 1056 aa12.65□□□□□ -0.38
ATM-222ENST00000533733 RABEP2Q9H5N1 569 aa12.65□□□□□ -0.38
ATM-222ENST00000533733 ASB7Q9H672 318 aa12.65□□□□□ -0.38
ATM-222ENST00000533733 RPF1Q9H9Y2 349 aaKnown RBP12.65□□□□□ -0.38
ATM-222ENST00000533733 SAMD15Q9P1V8 674 aa12.65□□□□□ -0.38
ATM-222ENST00000533733 USTQ9Y2C2 406 aa12.65□□□□□ -0.38
ATM-222ENST00000533733 RALGAPA2Q2PPJ7 1873 aa12.65□□□□□ -0.39
ATM-222ENST00000533733 MCM3APO60318 1980 aa12.64□□□□□ -0.39
ATM-222ENST00000533733 SIGLEC16A6NMB1 481 aa12.64□□□□□ -0.39
ATM-222ENST00000533733 ZBTB42B2RXF5 422 aa12.64□□□□□ -0.39
ATM-222ENST00000533733 DNALI1O14645 258 aaPredicted RBP12.64□□□□□ -0.39
ATM-222ENST00000533733 KRT1P04264 644 aa12.64□□□□□ -0.39
ATM-222ENST00000533733 SRGAP2CP0DJJ0 459 aa12.64□□□□□ -0.39
ATM-222ENST00000533733 MCF2P10911 925 aa12.64□□□□□ -0.39
ATM-222ENST00000533733 TNFSF9P41273 254 aa12.64□□□□□ -0.39
ATM-222ENST00000533733 RASA2Q15283 850 aa12.64□□□□□ -0.39
ATM-222ENST00000533733 LY6KQ17RY6 165 aa12.64□□□□□ -0.39
ATM-222ENST00000533733 ZNF667Q5HYK9 610 aa12.64□□□□□ -0.39
ATM-222ENST00000533733 GPAT2Q6NUI2 795 aa12.64□□□□□ -0.39
ATM-222ENST00000533733 CCDC62Q6P9F0 684 aa12.64□□□□□ -0.39
ATM-222ENST00000533733 SPOCD1Q6ZMY3 1216 aa12.64□□□□□ -0.39
ATM-222ENST00000533733 ZBTB33Q86T24 672 aa12.64□□□□□ -0.39
ATM-222ENST00000533733 ALLCQ8N6M5 410 aa12.64□□□□□ -0.39
ATM-222ENST00000533733 BCO2Q9BYV7 579 aa12.64□□□□□ -0.39
ATM-222ENST00000533733 EFCC1Q9HA90 598 aa12.64□□□□□ -0.39
ATM-222ENST00000533733 PCDH9Q9HC56 1237 aa12.64□□□□□ -0.39
ATM-222ENST00000533733 UBN1Q9NPG3 1134 aa12.64□□□□□ -0.39
ATM-222ENST00000533733 ERAP1Q9NZ08 941 aa12.64□□□□□ -0.39
ATM-222ENST00000533733 SENP1Q9P0U3 644 aa12.64□□□□□ -0.39
ATM-222ENST00000533733 SHOC2Q9UQ13 582 aa12.64□□□□□ -0.39
ATM-222ENST00000533733 CITO14578 2027 aa12.64□□□□□ -0.39
ATM-222ENST00000533733 FAM170AA1A519 330 aa12.63□□□□□ -0.39
ATM-222ENST00000533733 H0YHG0 523 aa12.63□□□□□ -0.39
ATM-222ENST00000533733 STAU1O95793 577 aaKnown RBP12.63□□□□□ -0.39
ATM-222ENST00000533733 ASPAP45381 313 aa12.63□□□□□ -0.39
ATM-222ENST00000533733 LIG3P49916 1009 aa12.63□□□□□ -0.39
ATM-222ENST00000533733 TFAMQ00059 246 aaKnown RBP12.63□□□□□ -0.39
ATM-222ENST00000533733 ACTN3Q08043 901 aaPredicted RBP12.63□□□□□ -0.39
ATM-222ENST00000533733 IFT88Q13099 833 aa12.63□□□□□ -0.39
ATM-222ENST00000533733 MKRN4PQ13434 485 aaPredicted RBP12.63□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms