RNA–Protein interactions for RNA: ENST00000533628.5

RPUSD4-208, Transcript of RNA pseudouridylate synthase domain containing 4, humanhuman

TSL 1 (best) BASIC

Gene RPUSD4, Length 2,053 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPUSD4-208ENST00000533628 FAM163BP0C2L3 166 aa13.64□□□□□ -0.23
RPUSD4-208ENST00000533628 ATP1A3P13637 1013 aa13.64□□□□□ -0.23
RPUSD4-208ENST00000533628 KCNC3Q14003 757 aa13.64□□□□□ -0.23
RPUSD4-208ENST00000533628 PSMD5Q16401 504 aa13.64□□□□□ -0.23
RPUSD4-208ENST00000533628 DUSP6Q16828 381 aa13.64□□□□□ -0.23
RPUSD4-208ENST00000533628 PDXDC1Q6P996 788 aa13.64□□□□□ -0.23
RPUSD4-208ENST00000533628 ANKS3Q6ZW76 656 aa13.64□□□□□ -0.23
RPUSD4-208ENST00000533628 FAM200AQ8TCP9 573 aa13.64□□□□□ -0.23
RPUSD4-208ENST00000533628 SDCBP2Q9H190 292 aa13.64□□□□□ -0.23
RPUSD4-208ENST00000533628 NDST4Q9H3R1 872 aa13.64□□□□□ -0.23
RPUSD4-208ENST00000533628 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP13.64□□□□□ -0.23
RPUSD4-208ENST00000533628 TAB2Q9NYJ8 693 aa13.64□□□□□ -0.23
RPUSD4-208ENST00000533628 DSEQ9UL01 958 aa13.64□□□□□ -0.23
RPUSD4-208ENST00000533628 NME7Q9Y5B8 376 aa13.64□□□□□ -0.23
RPUSD4-208ENST00000533628 PRRC2BQ5JSZ5 2229 aaKnown RBP13.64□□□□□ -0.23
RPUSD4-208ENST00000533628 HUS1O60921 280 aa13.63□□□□□ -0.23
RPUSD4-208ENST00000533628 CLASP2O75122 1294 aaKnown RBP13.63□□□□□ -0.23
RPUSD4-208ENST00000533628 TACC1O75410 805 aa13.63□□□□□ -0.23
RPUSD4-208ENST00000533628 RPL17P18621 184 aaKnown RBP13.63□□□□□ -0.23
RPUSD4-208ENST00000533628 ASPAP45381 313 aa13.63□□□□□ -0.23
RPUSD4-208ENST00000533628 NOP14P78316 857 aaKnown RBP13.63□□□□□ -0.23
RPUSD4-208ENST00000533628 YWHAHQ04917 246 aaPredicted RBP13.63□□□□□ -0.23
RPUSD4-208ENST00000533628 HYAL1Q12794 435 aa13.63□□□□□ -0.23
RPUSD4-208ENST00000533628 BMS1Q14692 1282 aaKnown RBP13.63□□□□□ -0.23
RPUSD4-208ENST00000533628 COL19A1Q14993 1142 aa13.63□□□□□ -0.23
RPUSD4-208ENST00000533628 ZNF667Q5HYK9 610 aa13.63□□□□□ -0.23
RPUSD4-208ENST00000533628 DPY19L2P1Q6NXN4 242 aa13.63□□□□□ -0.23
RPUSD4-208ENST00000533628 EHBP1Q8NDI1 1231 aa13.63□□□□□ -0.23
RPUSD4-208ENST00000533628 SPATA18Q8TC71 538 aa13.63□□□□□ -0.23
RPUSD4-208ENST00000533628 SLC22A17Q8WUG5 538 aa13.63□□□□□ -0.23
RPUSD4-208ENST00000533628 TATDN2Q93075 761 aa13.63□□□□□ -0.23
RPUSD4-208ENST00000533628 MRPL45Q9BRJ2 306 aaKnown RBP13.63□□□□□ -0.23
RPUSD4-208ENST00000533628 BCO2Q9BYV7 579 aa13.63□□□□□ -0.23
RPUSD4-208ENST00000533628 UTP3Q9NQZ2 479 aaKnown RBP eCLIP13.63□□□□□ -0.23
RPUSD4-208ENST00000533628 FBXL5Q9UKA1 691 aa13.63□□□□□ -0.23
RPUSD4-208ENST00000533628 ARHGEF37A1IGU5 675 aa13.63□□□□□ -0.23
RPUSD4-208ENST00000533628 GTPBP10A4D1E9 387 aaKnown RBP13.63□□□□□ -0.23
RPUSD4-208ENST00000533628 H7C4K7 107 aa13.63□□□□□ -0.23
RPUSD4-208ENST00000533628 PER2O15055 1255 aa13.63□□□□□ -0.23
RPUSD4-208ENST00000533628 FOSL2P15408 326 aa13.63□□□□□ -0.23
RPUSD4-208ENST00000533628 WARSP23381 471 aaKnown RBP13.63□□□□□ -0.23
RPUSD4-208ENST00000533628 CBX1P83916 185 aa13.63□□□□□ -0.23
RPUSD4-208ENST00000533628 OVOS1Q6IE37 1185 aa13.63□□□□□ -0.23
RPUSD4-208ENST00000533628 SLC8B1Q6J4K2 584 aa13.63□□□□□ -0.23
RPUSD4-208ENST00000533628 TMEM86AQ8N2M4 240 aa13.63□□□□□ -0.23
RPUSD4-208ENST00000533628 FAXDC2Q96IV6 333 aa13.63□□□□□ -0.23
RPUSD4-208ENST00000533628 SMYD3Q9H7B4 428 aa13.63□□□□□ -0.23
RPUSD4-208ENST00000533628 NXF1Q9UBU9 619 aaKnown RBP13.63□□□□□ -0.23
RPUSD4-208ENST00000533628 COPB1P53618 953 aaKnown RBP13.62□□□□□ -0.23
RPUSD4-208ENST00000533628 CDH8P55286 799 aa13.62□□□□□ -0.23
RPUSD4-208ENST00000533628 CREMQ03060 361 aa13.62□□□□□ -0.23
RPUSD4-208ENST00000533628 CTXN3Q4LDR2 81 aa13.62□□□□□ -0.23
RPUSD4-208ENST00000533628 LILRA6Q6PI73 481 aa13.62□□□□□ -0.23
RPUSD4-208ENST00000533628 RBM23Q86U06 439 aaKnown RBP13.62□□□□□ -0.23
RPUSD4-208ENST00000533628 ADGRF2Q8IZF7 708 aa13.62□□□□□ -0.23
RPUSD4-208ENST00000533628 VN1R2Q8NFZ6 395 aa13.62□□□□□ -0.23
RPUSD4-208ENST00000533628 OR10T2Q8NGX3 314 aa13.62□□□□□ -0.23
RPUSD4-208ENST00000533628 EMILIN2Q9BXX0 1053 aa13.62□□□□□ -0.23
RPUSD4-208ENST00000533628 TLE6Q9H808 572 aa13.62□□□□□ -0.23
RPUSD4-208ENST00000533628 VGLL3A8MV65 326 aa13.62□□□□□ -0.23
RPUSD4-208ENST00000533628 BECN2A8MW95 431 aa13.62□□□□□ -0.23
RPUSD4-208ENST00000533628 HCRTO43612 131 aa13.62□□□□□ -0.23
RPUSD4-208ENST00000533628 C1RP00736 705 aa13.62□□□□□ -0.23
RPUSD4-208ENST00000533628 CDK11BP21127 795 aaKnown RBP13.62□□□□□ -0.23
RPUSD4-208ENST00000533628 NRIP1P48552 1158 aa13.62□□□□□ -0.23
RPUSD4-208ENST00000533628 NDUFV1P49821 464 aa13.62□□□□□ -0.23
RPUSD4-208ENST00000533628 TNNC1P63316 161 aa13.62□□□□□ -0.23
RPUSD4-208ENST00000533628 KCNMA1Q12791 1236 aa13.62□□□□□ -0.23
RPUSD4-208ENST00000533628 RAB33AQ14088 237 aa13.62□□□□□ -0.23
RPUSD4-208ENST00000533628 ZNF280DQ6N043 979 aa13.62□□□□□ -0.23
RPUSD4-208ENST00000533628 TMEM209Q96SK2 561 aa13.62□□□□□ -0.23
RPUSD4-208ENST00000533628 MMS19Q96T76 1030 aa13.62□□□□□ -0.23
RPUSD4-208ENST00000533628 CDCA3Q99618 268 aaPredicted RBP13.62□□□□□ -0.23
RPUSD4-208ENST00000533628 OXCT2Q9BYC2 517 aaPredicted RBP13.62□□□□□ -0.23
RPUSD4-208ENST00000533628 NIF3L1Q9GZT8 377 aa13.62□□□□□ -0.23
RPUSD4-208ENST00000533628 INTS2Q9H0H0 1204 aaKnown RBP13.62□□□□□ -0.23
RPUSD4-208ENST00000533628 VPS16Q9H269 839 aa13.62□□□□□ -0.23
RPUSD4-208ENST00000533628 CDY1Q9Y6F8 540 aa13.62□□□□□ -0.23
RPUSD4-208ENST00000533628 REV3LO60673 3130 aa13.62□□□□□ -0.23
RPUSD4-208ENST00000533628 PLXNA3P51805 1871 aa13.61□□□□□ -0.23
RPUSD4-208ENST00000533628 OR6C75A6NL08 312 aa13.61□□□□□ -0.23
RPUSD4-208ENST00000533628 SLC9A1P19634 815 aa13.61□□□□□ -0.23
RPUSD4-208ENST00000533628 LMO2P25791 158 aa13.61□□□□□ -0.23
RPUSD4-208ENST00000533628 OR1D2P34982 312 aa13.61□□□□□ -0.23
RPUSD4-208ENST00000533628 RAP1GAPP47736 663 aa13.61□□□□□ -0.23
RPUSD4-208ENST00000533628 CLCN4P51793 760 aa13.61□□□□□ -0.23
RPUSD4-208ENST00000533628 CTC1Q2NKJ3 1217 aa13.61□□□□□ -0.23
RPUSD4-208ENST00000533628 METTL23Q86XA0 190 aa13.61□□□□□ -0.23
RPUSD4-208ENST00000533628 PKMYT1Q99640 499 aa13.61□□□□□ -0.23
RPUSD4-208ENST00000533628 CRACR2AQ9BSW2 395 aa13.61□□□□□ -0.23
RPUSD4-208ENST00000533628 IMPG2Q9BZV3 1241 aa13.61□□□□□ -0.23
RPUSD4-208ENST00000533628 CYP3A43Q9HB55 503 aa13.61□□□□□ -0.23
RPUSD4-208ENST00000533628 STXBP5LQ9Y2K9 1186 aa13.61□□□□□ -0.23
RPUSD4-208ENST00000533628 ABLIM3O94929 683 aa13.6□□□□□ -0.23
RPUSD4-208ENST00000533628 VNN2O95498 520 aa13.6□□□□□ -0.23
RPUSD4-208ENST00000533628 GLP2RO95838 553 aa13.6□□□□□ -0.23
RPUSD4-208ENST00000533628 ADH1AP07327 375 aa13.6□□□□□ -0.23
RPUSD4-208ENST00000533628 PON1P27169 355 aa13.6□□□□□ -0.23
RPUSD4-208ENST00000533628 CA8P35219 290 aa13.6□□□□□ -0.23
RPUSD4-208ENST00000533628 LHX1P48742 406 aa13.6□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms