RNA–Protein interactions for RNA: ENST00000533482.5

RAD50-209, Transcript of RAD50 double strand break repair protein, humanhuman

TSL 1 (best)

Gene RAD50, Length 4,373 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAD50-209ENST00000533482 TGFB1I1O43294 461 aa13.05□□□□□ -0.32
RAD50-209ENST00000533482 OPHN1O60890 802 aa13.05□□□□□ -0.32
RAD50-209ENST00000533482 MARCKSL1P49006 195 aa13.05□□□□□ -0.32
RAD50-209ENST00000533482 AP3M2P53677 418 aa13.05□□□□□ -0.32
RAD50-209ENST00000533482 CDC42EP4Q9H3Q1 356 aaKnown RBP13.05□□□□□ -0.32
RAD50-209ENST00000533482 C17orf75Q9HAS0 396 aa13.05□□□□□ -0.32
RAD50-209ENST00000533482 METTL5Q9NRN9 209 aaKnown RBP13.05□□□□□ -0.32
RAD50-209ENST00000533482 TPX2Q9ULW0 747 aaKnown RBP13.05□□□□□ -0.32
RAD50-209ENST00000533482 FRMPD4Q14CM0 1322 aa13.05□□□□□ -0.32
RAD50-209ENST00000533482 H3BRB1 525 aa13.05□□□□□ -0.32
RAD50-209ENST00000533482 DCTN3O75935 186 aa13.05□□□□□ -0.32
RAD50-209ENST00000533482 UPP2O95045 317 aa13.05□□□□□ -0.32
RAD50-209ENST00000533482 NAMPTP43490 491 aa13.05□□□□□ -0.32
RAD50-209ENST00000533482 CDH8P55286 799 aa13.05□□□□□ -0.32
RAD50-209ENST00000533482 DGKDQ16760 1214 aa13.05□□□□□ -0.32
RAD50-209ENST00000533482 PID1Q7Z2X4 250 aa13.05□□□□□ -0.32
RAD50-209ENST00000533482 ACOT1Q86TX2 421 aa13.05□□□□□ -0.32
RAD50-209ENST00000533482 CRLF3Q8IUI8 442 aa13.05□□□□□ -0.32
RAD50-209ENST00000533482 PARP9Q8IXQ6 854 aa13.05□□□□□ -0.32
RAD50-209ENST00000533482 PDCD6IPQ8WUM4 868 aaKnown RBP13.05□□□□□ -0.32
RAD50-209ENST00000533482 CAVIN3Q969G5 261 aa13.05□□□□□ -0.32
RAD50-209ENST00000533482 FAM167BQ9BTA0 163 aa13.05□□□□□ -0.32
RAD50-209ENST00000533482 NT5C1AQ9BXI3 368 aa13.05□□□□□ -0.32
RAD50-209ENST00000533482 TUT1Q9H6E5 874 aaKnown RBP13.05□□□□□ -0.32
RAD50-209ENST00000533482 SYF2O95926 243 aaKnown RBP13.05□□□□□ -0.32
RAD50-209ENST00000533482 ARFIP2P53365 341 aa13.05□□□□□ -0.32
RAD50-209ENST00000533482 NR1H3Q13133 447 aa13.05□□□□□ -0.32
RAD50-209ENST00000533482 DAB2IPQ5VWQ8 1189 aa13.05□□□□□ -0.32
RAD50-209ENST00000533482 METTL7BQ6UX53 244 aa13.05□□□□□ -0.32
RAD50-209ENST00000533482 VSIG10LQ86VR7 867 aa13.05□□□□□ -0.32
RAD50-209ENST00000533482 TRIM42Q8IWZ5 723 aa13.05□□□□□ -0.32
RAD50-209ENST00000533482 HSD17B14Q9BPX1 270 aa13.05□□□□□ -0.32
RAD50-209ENST00000533482 SMYD3Q9H7B4 428 aa13.05□□□□□ -0.32
RAD50-209ENST00000533482 NPHS2Q9NP85 383 aa13.05□□□□□ -0.32
RAD50-209ENST00000533482 STAP1Q9ULZ2 295 aa13.05□□□□□ -0.32
RAD50-209ENST00000533482 FAM208AQ9UK61 1670 aaKnown RBP13.05□□□□□ -0.32
RAD50-209ENST00000533482 AFDNP55196 1824 aaKnown RBP13.04□□□□□ -0.32
RAD50-209ENST00000533482 KIAA0391O15091 583 aaKnown RBP13.04□□□□□ -0.32
RAD50-209ENST00000533482 RARAP10276 462 aa13.04□□□□□ -0.32
RAD50-209ENST00000533482 LAMTOR4Q0VGL1 99 aa13.04□□□□□ -0.32
RAD50-209ENST00000533482 TMEM132BQ14DG7 1078 aa13.04□□□□□ -0.32
RAD50-209ENST00000533482 MMEL1Q495T6 779 aa13.04□□□□□ -0.32
RAD50-209ENST00000533482 MDH1BQ5I0G3 518 aa13.04□□□□□ -0.32
RAD50-209ENST00000533482 LNX1Q8TBB1 728 aaPredicted RBP13.04□□□□□ -0.32
RAD50-209ENST00000533482 EXT2Q93063 718 aa13.04□□□□□ -0.32
RAD50-209ENST00000533482 MYCBPQ99417 103 aaPredicted RBP13.04□□□□□ -0.32
RAD50-209ENST00000533482 MRIQ9BWK5 157 aa13.04□□□□□ -0.32
RAD50-209ENST00000533482 GPRC5DQ9NZD1 345 aa13.04□□□□□ -0.32
RAD50-209ENST00000533482 XPO7Q9UIA9 1087 aaKnown RBP13.04□□□□□ -0.32
RAD50-209ENST00000533482 USP15Q9Y4E8 981 aaPredicted RBP13.04□□□□□ -0.32
RAD50-209ENST00000533482 ATP9BO43861 1147 aa13.04□□□□□ -0.32
RAD50-209ENST00000533482 RPS6KA5O75582 802 aa13.04□□□□□ -0.32
RAD50-209ENST00000533482 GJB1P08034 283 aa13.04□□□□□ -0.32
RAD50-209ENST00000533482 ALDH5A1P51649 535 aaPredicted RBP13.04□□□□□ -0.32
RAD50-209ENST00000533482 PTENP60484 403 aa13.04□□□□□ -0.32
RAD50-209ENST00000533482 IFI35P80217 286 aaPredicted RBP13.04□□□□□ -0.32
RAD50-209ENST00000533482 TSTA3Q13630 321 aaPredicted RBP13.04□□□□□ -0.32
RAD50-209ENST00000533482 PIGHQ14442 188 aaPredicted RBP13.04□□□□□ -0.32
RAD50-209ENST00000533482 UGCGQ16739 394 aa13.04□□□□□ -0.32
RAD50-209ENST00000533482 IRF2BP2Q7Z5L9 587 aa13.04□□□□□ -0.32
RAD50-209ENST00000533482 NUDCD3Q8IVD9 361 aa13.04□□□□□ -0.32
RAD50-209ENST00000533482 APPL2Q8NEU8 664 aa13.04□□□□□ -0.32
RAD50-209ENST00000533482 TMEM121Q9BTD3 319 aa13.04□□□□□ -0.32
RAD50-209ENST00000533482 HAUS5O94927 633 aa13.04□□□□□ -0.32
RAD50-209ENST00000533482 EPHB1P54762 984 aa13.04□□□□□ -0.32
RAD50-209ENST00000533482 FKBP1CQ5VVH2 108 aa13.04□□□□□ -0.32
RAD50-209ENST00000533482 ERP27Q96DN0 273 aa13.04□□□□□ -0.32
RAD50-209ENST00000533482 PRG3Q9Y2Y8 225 aaPredicted RBP13.04□□□□□ -0.32
RAD50-209ENST00000533482 RGPD2P0DJD1 1756 aa13.04□□□□□ -0.32
RAD50-209ENST00000533482 A0A0A6YYK5 440 aaPredicted RBP13.04□□□□□ -0.32
RAD50-209ENST00000533482 FAM47DPA6NHR8 397 aa13.04□□□□□ -0.32
RAD50-209ENST00000533482 PDHXO00330 501 aa13.04□□□□□ -0.32
RAD50-209ENST00000533482 RPL21P46778 160 aaKnown RBP13.04□□□□□ -0.32
RAD50-209ENST00000533482 TSPY1Q01534 308 aa13.04□□□□□ -0.32
RAD50-209ENST00000533482 DCAF6Q58WW2 860 aa13.04□□□□□ -0.32
RAD50-209ENST00000533482 TRPM8Q7Z2W7 1104 aa13.04□□□□□ -0.32
RAD50-209ENST00000533482 GPC2Q8N158 579 aa13.04□□□□□ -0.32
RAD50-209ENST00000533482 RAET1EQ8TD07 263 aa13.04□□□□□ -0.32
RAD50-209ENST00000533482 ARL2BPQ9Y2Y0 163 aa13.04□□□□□ -0.32
RAD50-209ENST00000533482 YY1P25490 414 aa13.03□□□□□ -0.32
RAD50-209ENST00000533482 FNTAP49354 379 aa13.03□□□□□ -0.32
RAD50-209ENST00000533482 ZNF844Q08AG5 666 aa13.03□□□□□ -0.32
RAD50-209ENST00000533482 ATG16L1Q676U5 607 aa13.03□□□□□ -0.32
RAD50-209ENST00000533482 HDAC11Q96DB2 347 aa13.03□□□□□ -0.32
RAD50-209ENST00000533482 TNIP3Q96KP6 325 aa13.03□□□□□ -0.32
RAD50-209ENST00000533482 ZNF560Q96MR9 790 aa13.03□□□□□ -0.32
RAD50-209ENST00000533482 SPON2Q9BUD6 331 aa13.03□□□□□ -0.32
RAD50-209ENST00000533482 GBA2Q9HCG7 927 aaPredicted RBP13.03□□□□□ -0.32
RAD50-209ENST00000533482 CISHQ9NSE2 258 aa13.03□□□□□ -0.32
RAD50-209ENST00000533482 GPATCH2LQ9NWQ4 482 aa13.03□□□□□ -0.32
RAD50-209ENST00000533482 CYP39A1Q9NYL5 469 aa13.03□□□□□ -0.32
RAD50-209ENST00000533482 NOP53Q9NZM5 478 aaKnown RBP13.03□□□□□ -0.32
RAD50-209ENST00000533482 SLC12A6Q9UHW9 1150 aa13.03□□□□□ -0.32
RAD50-209ENST00000533482 EGFRP00533 1210 aa13.03□□□□□ -0.32
RAD50-209ENST00000533482 STAG3L1P0CL83 205 aa13.03□□□□□ -0.32
RAD50-209ENST00000533482 CPB1P15086 417 aa13.03□□□□□ -0.32
RAD50-209ENST00000533482 ITGB3BPQ13352 177 aaPredicted RBP13.03□□□□□ -0.32
RAD50-209ENST00000533482 THOC5Q13769 683 aaKnown RBP13.03□□□□□ -0.32
RAD50-209ENST00000533482 WDR75Q8IWA0 830 aaKnown RBP13.03□□□□□ -0.32
RAD50-209ENST00000533482 THEM5Q8N1Q8 247 aa13.03□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms