RNA–Protein interactions for RNA: ENST00000533209.5

SSBP3-214, Transcript of single stranded DNA binding protein 3, humanhuman

TSL 4

Gene SSBP3, Length 552 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP3-214ENST00000533209 PIK3CAP42336 1068 aa12.86□□□□□ -0.35
SSBP3-214ENST00000533209 MXI1P50539 228 aa12.86□□□□□ -0.35
SSBP3-214ENST00000533209 AAK1Q2M2I8 961 aa12.86□□□□□ -0.35
SSBP3-214ENST00000533209 SGSM1Q2NKQ1 1148 aa12.86□□□□□ -0.35
SSBP3-214ENST00000533209 ZNF699Q32M78 642 aa12.86□□□□□ -0.35
SSBP3-214ENST00000533209 CBWD6Q4V339 395 aa12.86□□□□□ -0.35
SSBP3-214ENST00000533209 CBWD3Q5JTY5 395 aa12.86□□□□□ -0.35
SSBP3-214ENST00000533209 CBWD5Q5RIA9 395 aa12.86□□□□□ -0.35
SSBP3-214ENST00000533209 RARS2Q5T160 578 aaKnown RBP12.86□□□□□ -0.35
SSBP3-214ENST00000533209 TPGS2Q68CL5 300 aa12.86□□□□□ -0.35
SSBP3-214ENST00000533209 RNF19BQ6ZMZ0 732 aa12.86□□□□□ -0.35
SSBP3-214ENST00000533209 C11orf57Q6ZUT1 292 aaPredicted RBP12.86□□□□□ -0.35
SSBP3-214ENST00000533209 DPH6Q7L8W6 267 aa12.86□□□□□ -0.35
SSBP3-214ENST00000533209 TRIM59Q8IWR1 403 aa12.86□□□□□ -0.35
SSBP3-214ENST00000533209 ADGRF2Q8IZF7 708 aa12.86□□□□□ -0.35
SSBP3-214ENST00000533209 TMEM86AQ8N2M4 240 aa12.86□□□□□ -0.35
SSBP3-214ENST00000533209 ZNF461Q8TAF7 563 aa12.86□□□□□ -0.35
SSBP3-214ENST00000533209 FEZF2Q8TBJ5 459 aa12.86□□□□□ -0.35
SSBP3-214ENST00000533209 SPATA18Q8TC71 538 aa12.86□□□□□ -0.35
SSBP3-214ENST00000533209 TAF4BQ92750 862 aa12.86□□□□□ -0.35
SSBP3-214ENST00000533209 SEMA4DQ92854 862 aa12.86□□□□□ -0.35
SSBP3-214ENST00000533209 ASB2Q96Q27 587 aa12.86□□□□□ -0.35
SSBP3-214ENST00000533209 MMS19Q96T76 1030 aa12.86□□□□□ -0.35
SSBP3-214ENST00000533209 ANO10Q9NW15 660 aa12.86□□□□□ -0.35
SSBP3-214ENST00000533209 DPP7Q9UHL4 492 aa12.86□□□□□ -0.35
SSBP3-214ENST00000533209 POLIQ9UNA4 740 aa12.86□□□□□ -0.35
SSBP3-214ENST00000533209 MBTPS2O43462 519 aa12.85□□□□□ -0.35
SSBP3-214ENST00000533209 HCRTO43612 131 aa12.85□□□□□ -0.35
SSBP3-214ENST00000533209 TACC1O75410 805 aa12.85□□□□□ -0.35
SSBP3-214ENST00000533209 RFPL2O75678 378 aa12.85□□□□□ -0.35
SSBP3-214ENST00000533209 PAPLNO95428 1278 aa12.85□□□□□ -0.35
SSBP3-214ENST00000533209 VNN2O95498 520 aa12.85□□□□□ -0.35
SSBP3-214ENST00000533209 FAM163BP0C2L3 166 aa12.85□□□□□ -0.35
SSBP3-214ENST00000533209 ATF2P15336 505 aa12.85□□□□□ -0.35
SSBP3-214ENST00000533209 WARSP23381 471 aaKnown RBP12.85□□□□□ -0.35
SSBP3-214ENST00000533209 LHX1P48742 406 aa12.85□□□□□ -0.35
SSBP3-214ENST00000533209 TNNC1P63316 161 aa12.85□□□□□ -0.35
SSBP3-214ENST00000533209 GPR17Q13304 367 aa12.85□□□□□ -0.35
SSBP3-214ENST00000533209 SMAD4Q13485 552 aaKnown RBP12.85□□□□□ -0.35
SSBP3-214ENST00000533209 STX1AQ16623 288 aa12.85□□□□□ -0.35
SSBP3-214ENST00000533209 ZNF667Q5HYK9 610 aa12.85□□□□□ -0.35
SSBP3-214ENST00000533209 SPOPLQ6IQ16 392 aa12.85□□□□□ -0.35
SSBP3-214ENST00000533209 PTCRAQ6ISU1 281 aaPredicted RBP12.85□□□□□ -0.35
SSBP3-214ENST00000533209 ELMSAN1Q6PJG2 1045 aa12.85□□□□□ -0.35
SSBP3-214ENST00000533209 TMC5Q6UXY8 1006 aa12.85□□□□□ -0.35
SSBP3-214ENST00000533209 THEM5Q8N1Q8 247 aa12.85□□□□□ -0.35
SSBP3-214ENST00000533209 FBXL13Q8NEE6 735 aa12.85□□□□□ -0.35
SSBP3-214ENST00000533209 CMASQ8NFW8 434 aaPredicted RBP12.85□□□□□ -0.35
SSBP3-214ENST00000533209 SUSD6Q92537 303 aa12.85□□□□□ -0.35
SSBP3-214ENST00000533209 CNOT6LQ96LI5 555 aaKnown RBP12.85□□□□□ -0.35
SSBP3-214ENST00000533209 MRPL45Q9BRJ2 306 aaKnown RBP12.85□□□□□ -0.35
SSBP3-214ENST00000533209 PI4K2AQ9BTU6 479 aa12.85□□□□□ -0.35
SSBP3-214ENST00000533209 ZCWPW1Q9H0M4 648 aa12.85□□□□□ -0.35
SSBP3-214ENST00000533209 ADAM7Q9H2U9 754 aa12.85□□□□□ -0.35
SSBP3-214ENST00000533209 THAP9Q9H5L6 903 aa12.85□□□□□ -0.35
SSBP3-214ENST00000533209 SFXN1Q9H9B4 322 aa12.85□□□□□ -0.35
SSBP3-214ENST00000533209 APOBEC3GQ9HC16 384 aaKnown RBP12.85□□□□□ -0.35
SSBP3-214ENST00000533209 DDX43Q9NXZ2 648 aaKnown RBP12.85□□□□□ -0.35
SSBP3-214ENST00000533209 NXF1Q9UBU9 619 aaKnown RBP12.85□□□□□ -0.35
SSBP3-214ENST00000533209 AFF4Q9UHB7 1163 aaKnown RBP12.85□□□□□ -0.35
SSBP3-214ENST00000533209 CDH22Q9UJ99 828 aa12.85□□□□□ -0.35
SSBP3-214ENST00000533209 COQ4Q9Y3A0 265 aa12.85□□□□□ -0.35
SSBP3-214ENST00000533209 USP15Q9Y4E8 981 aaPredicted RBP12.85□□□□□ -0.35
SSBP3-214ENST00000533209 TSC2P49815 1807 aa12.85□□□□□ -0.35
SSBP3-214ENST00000533209 SPTBN5Q9NRC6 3674 aaKnown RBP12.84□□□□□ -0.35
SSBP3-214ENST00000533209 ZMYND10O75800 440 aa12.84□□□□□ -0.35
SSBP3-214ENST00000533209 SEC24AO95486 1093 aa12.84□□□□□ -0.35
SSBP3-214ENST00000533209 C8AP07357 584 aa12.84□□□□□ -0.35
SSBP3-214ENST00000533209 CCDC192P0DO97 292 aa12.84□□□□□ -0.35
SSBP3-214ENST00000533209 BMP1P13497 986 aa12.84□□□□□ -0.35
SSBP3-214ENST00000533209 FMO5P49326 533 aa12.84□□□□□ -0.35
SSBP3-214ENST00000533209 ITIH3Q06033 890 aa12.84□□□□□ -0.35
SSBP3-214ENST00000533209 TYRO3Q06418 890 aa12.84□□□□□ -0.35
SSBP3-214ENST00000533209 UVSSAQ2YD98 709 aa12.84□□□□□ -0.35
SSBP3-214ENST00000533209 PUS10Q3MIT2 529 aaKnown RBP12.84□□□□□ -0.35
SSBP3-214ENST00000533209 LIN9Q5TKA1 542 aa12.84□□□□□ -0.35
SSBP3-214ENST00000533209 LRRTM3Q86VH5 581 aa12.84□□□□□ -0.35
SSBP3-214ENST00000533209 TCEAL8Q8IYN2 117 aa12.84□□□□□ -0.35
SSBP3-214ENST00000533209 SLC7A14Q8TBB6 771 aa12.84□□□□□ -0.35
SSBP3-214ENST00000533209 ENOX1Q8TC92 643 aaKnown RBP12.84□□□□□ -0.35
SSBP3-214ENST00000533209 ZNF707Q96C28 371 aaPredicted RBP12.84□□□□□ -0.35
SSBP3-214ENST00000533209 PKMYT1Q99640 499 aa12.84□□□□□ -0.35
SSBP3-214ENST00000533209 ACBD6Q9BR61 282 aa12.84□□□□□ -0.35
SSBP3-214ENST00000533209 SDCBP2Q9H190 292 aa12.84□□□□□ -0.35
SSBP3-214ENST00000533209 SMYD3Q9H7B4 428 aa12.84□□□□□ -0.35
SSBP3-214ENST00000533209 UTP3Q9NQZ2 479 aaKnown RBP eCLIP12.84□□□□□ -0.351e-6■■■■■ 163.2
SSBP3-214ENST00000533209 RAB20Q9NX57 234 aa12.84□□□□□ -0.35
SSBP3-214ENST00000533209 ZDHHC7Q9NXF8 308 aa12.84□□□□□ -0.35
SSBP3-214ENST00000533209 MAFFQ9ULX9 164 aa12.84□□□□□ -0.35
SSBP3-214ENST00000533209 NME7Q9Y5B8 376 aa12.84□□□□□ -0.35
SSBP3-214ENST00000533209 PLXNA3P51805 1871 aa12.84□□□□□ -0.35
SSBP3-214ENST00000533209 CCDC195A0A1B0GUA6 201 aa12.83□□□□□ -0.36
SSBP3-214ENST00000533209 MTMR11A4FU01 709 aa12.83□□□□□ -0.36
SSBP3-214ENST00000533209 SPDYE4A6NLX3 237 aa12.83□□□□□ -0.36
SSBP3-214ENST00000533209 PMM2O15305 246 aa12.83□□□□□ -0.36
SSBP3-214ENST00000533209 WEE2P0C1S8 567 aa12.83□□□□□ -0.36
SSBP3-214ENST00000533209 IL9P15248 144 aa12.83□□□□□ -0.36
SSBP3-214ENST00000533209 ACAT1P24752 427 aaKnown RBP12.83□□□□□ -0.36
SSBP3-214ENST00000533209 LMO2P25791 158 aa12.83□□□□□ -0.36
SSBP3-214ENST00000533209 PCSK1P29120 753 aa12.83□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 51.7 ms