RNA–Protein interactions for RNA: ENST00000531516.1

C11orf54-210, Transcript of chromosome 11 open reading frame 54, humanhuman

TSL 3

Gene C11orf54, Length 168 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C11orf54-210ENST00000531516 SNRNP35Q16560 246 aaKnown RBP13.53□□□□□ -0.24
C11orf54-210ENST00000531516 KNOP1Q1ED39 458 aaKnown RBP13.53□□□□□ -0.24
C11orf54-210ENST00000531516 WSCD1Q658N2 575 aa13.53□□□□□ -0.24
C11orf54-210ENST00000531516 PHLDB3Q6NSJ2 640 aa13.53□□□□□ -0.24
C11orf54-210ENST00000531516 WDR49Q8IV35 697 aa13.53□□□□□ -0.24
C11orf54-210ENST00000531516 C1orf127Q8N9H9 656 aa13.53□□□□□ -0.24
C11orf54-210ENST00000531516 ATAD1Q8NBU5 361 aa13.53□□□□□ -0.24
C11orf54-210ENST00000531516 ATOH1Q92858 354 aaPredicted RBP13.53□□□□□ -0.24
C11orf54-210ENST00000531516 FGF14Q92915 247 aa13.53□□□□□ -0.24
C11orf54-210ENST00000531516 HPS3Q969F9 1004 aa13.53□□□□□ -0.24
C11orf54-210ENST00000531516 ELSPBP1Q96BH3 223 aa13.53□□□□□ -0.24
C11orf54-210ENST00000531516 ZCWPW1Q9H0M4 648 aa13.53□□□□□ -0.24
C11orf54-210ENST00000531516 IKZF4Q9H2S9 585 aa13.53□□□□□ -0.24
C11orf54-210ENST00000531516 SLC39A2Q9NP94 309 aa13.53□□□□□ -0.24
C11orf54-210ENST00000531516 AGPAT3Q9NRZ7 376 aa13.53□□□□□ -0.24
C11orf54-210ENST00000531516 INTS13Q9NVM9 706 aa13.53□□□□□ -0.24
C11orf54-210ENST00000531516 SERTAD1Q9UHV2 236 aa13.53□□□□□ -0.24
C11orf54-210ENST00000531516 ZMYM5Q9UJ78 669 aa13.53□□□□□ -0.24
C11orf54-210ENST00000531516 MRPS17Q9Y2R5 130 aaKnown RBP13.53□□□□□ -0.24
C11orf54-210ENST00000531516 PCDHB5Q9Y5E4 795 aa13.53□□□□□ -0.24
C11orf54-210ENST00000531516 SNX9Q9Y5X1 595 aa13.53□□□□□ -0.24
C11orf54-210ENST00000531516 A0A1B0GVL5 298 aa13.52□□□□□ -0.25
C11orf54-210ENST00000531516 DPYSL4O14531 572 aa13.52□□□□□ -0.25
C11orf54-210ENST00000531516 NCAM2O15394 837 aa13.52□□□□□ -0.25
C11orf54-210ENST00000531516 PHACTR2O75167 634 aa13.52□□□□□ -0.25
C11orf54-210ENST00000531516 DLATP10515 647 aaKnown RBP13.52□□□□□ -0.25
C11orf54-210ENST00000531516 PFKFB1P16118 471 aa13.52□□□□□ -0.25
C11orf54-210ENST00000531516 CEBPBP17676 345 aa13.52□□□□□ -0.25
C11orf54-210ENST00000531516 CYP2J2P51589 502 aa13.52□□□□□ -0.25
C11orf54-210ENST00000531516 NUCB2P80303 420 aa13.52□□□□□ -0.25
C11orf54-210ENST00000531516 TRPC3Q13507 836 aa13.52□□□□□ -0.25
C11orf54-210ENST00000531516 CUL4BQ13620 913 aa13.52□□□□□ -0.25
C11orf54-210ENST00000531516 IER5LQ5T953 404 aa13.52□□□□□ -0.25
C11orf54-210ENST00000531516 EPM2AIP1Q7L775 607 aaPredicted RBP13.52□□□□□ -0.25
C11orf54-210ENST00000531516 DPH6Q7L8W6 267 aa13.52□□□□□ -0.25
C11orf54-210ENST00000531516 YAF2Q8IY57 180 aa13.52□□□□□ -0.25
C11orf54-210ENST00000531516 TOP6BLQ8N6T0 577 aa13.52□□□□□ -0.25
C11orf54-210ENST00000531516 RDH13Q8NBN7 331 aa13.52□□□□□ -0.25
C11orf54-210ENST00000531516 SMARCD2Q92925 531 aa13.52□□□□□ -0.25
C11orf54-210ENST00000531516 PSMG2Q969U7 264 aa13.52□□□□□ -0.25
C11orf54-210ENST00000531516 PAGE5Q96GU1 130 aa13.52□□□□□ -0.25
C11orf54-210ENST00000531516 HPDLQ96IR7 371 aa13.52□□□□□ -0.25
C11orf54-210ENST00000531516 KXD1Q9BQD3 176 aa13.52□□□□□ -0.25
C11orf54-210ENST00000531516 ACBD6Q9BR61 282 aa13.52□□□□□ -0.25
C11orf54-210ENST00000531516 TRMT61BQ9BVS5 477 aaKnown RBP13.52□□□□□ -0.25
C11orf54-210ENST00000531516 FGFBP2Q9BYJ0 223 aa13.52□□□□□ -0.25
C11orf54-210ENST00000531516 MTMR12Q9C0I1 747 aa13.52□□□□□ -0.25
C11orf54-210ENST00000531516 BRD9Q9H8M2 597 aa13.52□□□□□ -0.25
C11orf54-210ENST00000531516 TBC1D17Q9HA65 648 aa13.52□□□□□ -0.25
C11orf54-210ENST00000531516 DDX43Q9NXZ2 648 aaKnown RBP13.52□□□□□ -0.25
C11orf54-210ENST00000531516 ABI2Q9NYB9 513 aaPredicted RBP13.52□□□□□ -0.25
C11orf54-210ENST00000531516 CEP72Q9P209 647 aa13.52□□□□□ -0.25
C11orf54-210ENST00000531516 SLC27A5Q9Y2P5 690 aa13.52□□□□□ -0.25
C11orf54-210ENST00000531516 SIT1Q9Y3P8 196 aa13.52□□□□□ -0.25
C11orf54-210ENST00000531516 PLXNA3P51805 1871 aa13.52□□□□□ -0.25
C11orf54-210ENST00000531516 CITO14578 2027 aa13.52□□□□□ -0.25
C11orf54-210ENST00000531516 TECTAO75443 2155 aa13.51□□□□□ -0.25
C11orf54-210ENST00000531516 CLIC2O15247 247 aa13.51□□□□□ -0.25
C11orf54-210ENST00000531516 CDC25CP30307 473 aa13.51□□□□□ -0.25
C11orf54-210ENST00000531516 AP3M2P53677 418 aa13.51□□□□□ -0.25
C11orf54-210ENST00000531516 EPHA5P54756 1037 aa13.51□□□□□ -0.25
C11orf54-210ENST00000531516 RPL10AP62906 217 aaKnown RBP13.51□□□□□ -0.25
C11orf54-210ENST00000531516 GPC5P78333 572 aa13.51□□□□□ -0.25
C11orf54-210ENST00000531516 MAPRE1Q15691 268 aaKnown RBP13.51□□□□□ -0.25
C11orf54-210ENST00000531516 BMT2Q1RMZ1 405 aa13.51□□□□□ -0.25
C11orf54-210ENST00000531516 SLC5A9Q2M3M2 681 aa13.51□□□□□ -0.25
C11orf54-210ENST00000531516 PRSS36Q5K4E3 855 aa13.51□□□□□ -0.25
C11orf54-210ENST00000531516 DNAJB7Q7Z6W7 309 aaPredicted RBP13.51□□□□□ -0.25
C11orf54-210ENST00000531516 CBWD2Q8IUF1 395 aa13.51□□□□□ -0.25
C11orf54-210ENST00000531516 ADGRF2Q8IZF7 708 aa13.51□□□□□ -0.25
C11orf54-210ENST00000531516 TMEM105Q8N8V8 129 aa13.51□□□□□ -0.25
C11orf54-210ENST00000531516 DEPDC1BQ8WUY9 529 aa13.51□□□□□ -0.25
C11orf54-210ENST00000531516 SCFD1Q8WVM8 642 aa13.51□□□□□ -0.25
C11orf54-210ENST00000531516 IRF7Q92985 503 aa13.51□□□□□ -0.25
C11orf54-210ENST00000531516 CCDC127Q96BQ5 260 aa13.51□□□□□ -0.25
C11orf54-210ENST00000531516 MMS19Q96T76 1030 aa13.51□□□□□ -0.25
C11orf54-210ENST00000531516 NELL2Q99435 816 aa13.51□□□□□ -0.25
C11orf54-210ENST00000531516 ATXN3LQ9H3M9 355 aa13.51□□□□□ -0.25
C11orf54-210ENST00000531516 GDAP2Q9NXN4 497 aa13.51□□□□□ -0.25
C11orf54-210ENST00000531516 TRIOO75962 3097 aa13.5□□□□□ -0.25
C11orf54-210ENST00000531516 A0A1W2PQ27 194 aa13.5□□□□□ -0.25
C11orf54-210ENST00000531516 A0A1W2PQ64 194 aa13.5□□□□□ -0.25
C11orf54-210ENST00000531516 A0A1W2PQD8 194 aa13.5□□□□□ -0.25
C11orf54-210ENST00000531516 A0A1W2PRU2 124 aa13.5□□□□□ -0.25
C11orf54-210ENST00000531516 TRIM21P19474 475 aaKnown RBP13.5□□□□□ -0.25
C11orf54-210ENST00000531516 TNNC1P63316 161 aa13.5□□□□□ -0.25
C11orf54-210ENST00000531516 PSMD6Q15008 389 aa13.5□□□□□ -0.25
C11orf54-210ENST00000531516 MLF2Q15773 248 aaPredicted RBP13.5□□□□□ -0.25
C11orf54-210ENST00000531516 SLC44A4Q53GD3 710 aa13.5□□□□□ -0.25
C11orf54-210ENST00000531516 C4orf50Q6ZRC1 276 aa13.5□□□□□ -0.25
C11orf54-210ENST00000531516 SPATA2LQ8IUW3 424 aaPredicted RBP13.5□□□□□ -0.25
C11orf54-210ENST00000531516 C12orf56Q8IXR9 622 aa13.5□□□□□ -0.25
C11orf54-210ENST00000531516 HS6ST3Q8IZP7 471 aa13.5□□□□□ -0.25
C11orf54-210ENST00000531516 TMEM130Q8N3G9 435 aa13.5□□□□□ -0.25
C11orf54-210ENST00000531516 PDCL2Q8N4E4 241 aa13.5□□□□□ -0.25
C11orf54-210ENST00000531516 FSIP1Q8NA03 581 aa13.5□□□□□ -0.25
C11orf54-210ENST00000531516 GLIS3Q8NEA6 775 aa13.5□□□□□ -0.25
C11orf54-210ENST00000531516 PRSS33Q8NF86 280 aa13.5□□□□□ -0.25
C11orf54-210ENST00000531516 OR10T2Q8NGX3 314 aa13.5□□□□□ -0.25
C11orf54-210ENST00000531516 ZSCAN18Q8TBC5 510 aaPredicted RBP13.5□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 14.1 ms