RNA–Protein interactions for RNA: ENST00000531188.5

RPS3-217, Transcript of ribosomal protein S3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RPS3, Length 2,097 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPS3-217ENST00000531188 PTGISQ16647 500 aa12.97□□□□□ -0.33
RPS3-217ENST00000531188 TUBB8Q3ZCM7 444 aa12.97□□□□□ -0.33
RPS3-217ENST00000531188 LLGL2Q6P1M3 1020 aa12.97□□□□□ -0.33
RPS3-217ENST00000531188 APBB1IPQ7Z5R6 666 aaPredicted RBP12.97□□□□□ -0.33
RPS3-217ENST00000531188 NT5DC3Q86UY8 548 aa12.97□□□□□ -0.33
RPS3-217ENST00000531188 SESTD1Q86VW0 696 aa12.97□□□□□ -0.33
RPS3-217ENST00000531188 CD302Q8IX05 232 aa12.97□□□□□ -0.33
RPS3-217ENST00000531188 SMG8Q8ND04 991 aaKnown RBP12.97□□□□□ -0.33
RPS3-217ENST00000531188 PXYLP1Q8TE99 480 aa12.97□□□□□ -0.33
RPS3-217ENST00000531188 TFAP2BQ92481 460 aa12.97□□□□□ -0.33
RPS3-217ENST00000531188 ZNF653Q96CK0 615 aa12.97□□□□□ -0.33
RPS3-217ENST00000531188 HPDLQ96IR7 371 aa12.97□□□□□ -0.33
RPS3-217ENST00000531188 ITGA11Q9UKX5 1188 aa12.97□□□□□ -0.33
RPS3-217ENST00000531188 M0QZ92 97 aa12.97□□□□□ -0.33
RPS3-217ENST00000531188 FKTNO75072 461 aa12.97□□□□□ -0.33
RPS3-217ENST00000531188 KIF4AO95239 1232 aa12.97□□□□□ -0.33
RPS3-217ENST00000531188 SYF2O95926 243 aaKnown RBP12.97□□□□□ -0.33
RPS3-217ENST00000531188 CYP1A2P05177 515 aa12.97□□□□□ -0.33
RPS3-217ENST00000531188 ACLYP53396 1101 aa12.97□□□□□ -0.33
RPS3-217ENST00000531188 YARSP54577 528 aaKnown RBP12.97□□□□□ -0.33
RPS3-217ENST00000531188 NOMO3P69849 1222 aa12.97□□□□□ -0.33
RPS3-217ENST00000531188 MGAT3Q09327 533 aa12.97□□□□□ -0.33
RPS3-217ENST00000531188 NFX1Q12986 1120 aaKnown RBP12.97□□□□□ -0.33
RPS3-217ENST00000531188 RHOT2Q8IXI1 618 aa12.97□□□□□ -0.33
RPS3-217ENST00000531188 PCSK9Q8NBP7 692 aaKnown RBP12.97□□□□□ -0.33
RPS3-217ENST00000531188 ARRDC4Q8NCT1 418 aa12.97□□□□□ -0.33
RPS3-217ENST00000531188 CAGE1Q8TC20 777 aa12.97□□□□□ -0.33
RPS3-217ENST00000531188 BTBD6Q96KE9 485 aa12.97□□□□□ -0.33
RPS3-217ENST00000531188 SENP6Q9GZR1 1112 aaPredicted RBP12.97□□□□□ -0.33
RPS3-217ENST00000531188 TRMT13Q9NUP7 481 aaKnown RBP12.97□□□□□ -0.33
RPS3-217ENST00000531188 PARP2Q9UGN5 583 aa12.97□□□□□ -0.33
RPS3-217ENST00000531188 HMGXB4Q9UGU5 601 aa12.97□□□□□ -0.33
RPS3-217ENST00000531188 ST3GAL5Q9UNP4 418 aa12.97□□□□□ -0.33
RPS3-217ENST00000531188 IPPQ9Y573 584 aa12.97□□□□□ -0.33
RPS3-217ENST00000531188 ATICP31939 592 aa12.96□□□□□ -0.33
RPS3-217ENST00000531188 THPOP40225 353 aa12.96□□□□□ -0.33
RPS3-217ENST00000531188 RBP5P82980 135 aa12.96□□□□□ -0.33
RPS3-217ENST00000531188 CKAP4Q07065 602 aaKnown RBP12.96□□□□□ -0.33
RPS3-217ENST00000531188 ITGA7Q13683 1181 aa12.96□□□□□ -0.33
RPS3-217ENST00000531188 RPS6KA1Q15418 735 aa12.96□□□□□ -0.33
RPS3-217ENST00000531188 LHX8Q68G74 356 aa12.96□□□□□ -0.33
RPS3-217ENST00000531188 TWF2Q6IBS0 349 aaKnown RBP12.96□□□□□ -0.33
RPS3-217ENST00000531188 PEX26Q7Z412 305 aa12.96□□□□□ -0.33
RPS3-217ENST00000531188 RNF180Q86T96 592 aa12.96□□□□□ -0.33
RPS3-217ENST00000531188 RSPH3Q86UC2 560 aa12.96□□□□□ -0.33
RPS3-217ENST00000531188 NT5DC4Q86YG4 428 aa12.96□□□□□ -0.33
RPS3-217ENST00000531188 MCOLN2Q8IZK6 566 aa12.96□□□□□ -0.33
RPS3-217ENST00000531188 WHAMMQ8TF30 809 aa12.96□□□□□ -0.33
RPS3-217ENST00000531188 RUBCNQ92622 972 aa12.96□□□□□ -0.33
RPS3-217ENST00000531188 TWNKQ96RR1 684 aa12.96□□□□□ -0.33
RPS3-217ENST00000531188 NUP85Q9BW27 656 aa12.96□□□□□ -0.33
RPS3-217ENST00000531188 VRTNQ9H8Y1 702 aa12.96□□□□□ -0.33
RPS3-217ENST00000531188 AGO3Q9H9G7 860 aaKnown RBP12.96□□□□□ -0.33
RPS3-217ENST00000531188 CNTN3Q9P232 1028 aa12.96□□□□□ -0.33
RPS3-217ENST00000531188 CNOT8Q9UFF9 292 aaKnown RBP12.96□□□□□ -0.33
RPS3-217ENST00000531188 MEIS3P2A8K0S8 358 aa12.95□□□□□ -0.34
RPS3-217ENST00000531188 GNRH1P01148 92 aa12.95□□□□□ -0.34
RPS3-217ENST00000531188 RAD23BP54727 409 aa12.95□□□□□ -0.34
RPS3-217ENST00000531188 HADHBP55084 474 aaKnown RBP12.95□□□□□ -0.34
RPS3-217ENST00000531188 CENPCQ03188 943 aa12.95□□□□□ -0.34
RPS3-217ENST00000531188 C2orf54Q08AI8 447 aa12.95□□□□□ -0.34
RPS3-217ENST00000531188 TCEAL1Q15170 157 aa12.95□□□□□ -0.34
RPS3-217ENST00000531188 RPAINQ86UA6 219 aa12.95□□□□□ -0.34
RPS3-217ENST00000531188 CPNE8Q86YQ8 564 aa12.95□□□□□ -0.34
RPS3-217ENST00000531188 GTF3C4Q9UKN8 822 aa12.95□□□□□ -0.34
RPS3-217ENST00000531188 HPCAL4Q9UM19 191 aa12.95□□□□□ -0.34
RPS3-217ENST00000531188 DERAQ9Y315 318 aa12.95□□□□□ -0.34
RPS3-217ENST00000531188 ATXN2Q99700 1313 aaKnown RBP12.95□□□□□ -0.34
RPS3-217ENST00000531188 SMIM28A0A1B0GU29 152 aa12.95□□□□□ -0.34
RPS3-217ENST00000531188 TMEM110-MUSTN1A8MSY1 372 aa12.95□□□□□ -0.34
RPS3-217ENST00000531188 KCNK3O14649 394 aa12.95□□□□□ -0.34
RPS3-217ENST00000531188 RRM1P23921 792 aa12.95□□□□□ -0.34
RPS3-217ENST00000531188 NSFP46459 744 aaKnown RBP12.95□□□□□ -0.34
RPS3-217ENST00000531188 RNASE9P60153 205 aaKnown RBP12.95□□□□□ -0.34
RPS3-217ENST00000531188 MESDQ14696 234 aa12.95□□□□□ -0.34
RPS3-217ENST00000531188 MON1BQ7L1V2 547 aa12.95□□□□□ -0.34
RPS3-217ENST00000531188 SYCE1Q8N0S2 351 aa12.95□□□□□ -0.34
RPS3-217ENST00000531188 ELOVL4Q9GZR5 314 aa12.95□□□□□ -0.34
RPS3-217ENST00000531188 ALG6Q9Y672 507 aa12.95□□□□□ -0.34
RPS3-217ENST00000531188 PTCH2Q9Y6C5 1203 aa12.95□□□□□ -0.34
RPS3-217ENST00000531188 TDRD15B5MCY1 1934 aaKnown RBP12.94□□□□□ -0.34
RPS3-217ENST00000531188 EBAG9O00559 213 aa12.94□□□□□ -0.34
RPS3-217ENST00000531188 MTA2O94776 668 aa12.94□□□□□ -0.34
RPS3-217ENST00000531188 CHRM1P11229 460 aaPredicted RBP12.94□□□□□ -0.34
RPS3-217ENST00000531188 GRK4P32298 578 aa12.94□□□□□ -0.34
RPS3-217ENST00000531188 SOX4Q06945 474 aaPredicted RBP12.94□□□□□ -0.34
RPS3-217ENST00000531188 TRIM72Q6ZMU5 477 aa12.94□□□□□ -0.34
RPS3-217ENST00000531188 WDTC1Q8N5D0 677 aa12.94□□□□□ -0.34
RPS3-217ENST00000531188 SLC4A11Q8NBS3 891 aa12.94□□□□□ -0.34
RPS3-217ENST00000531188 FAM76AQ8TAV0 307 aa12.94□□□□□ -0.34
RPS3-217ENST00000531188 ZNF564Q8TBZ8 553 aaPredicted RBP12.94□□□□□ -0.34
RPS3-217ENST00000531188 HES6Q96HZ4 224 aa12.94□□□□□ -0.34
RPS3-217ENST00000531188 C11orf70Q9BRQ4 267 aa12.94□□□□□ -0.34
RPS3-217ENST00000531188 TRIM7Q9C029 511 aa12.94□□□□□ -0.34
RPS3-217ENST00000531188 GOLGA2P5Q9HBQ8 144 aa12.94□□□□□ -0.34
RPS3-217ENST00000531188 HMX1Q9NP08 348 aaPredicted RBP12.94□□□□□ -0.34
RPS3-217ENST00000531188 AMFRQ9UKV5 643 aa12.94□□□□□ -0.34
RPS3-217ENST00000531188 DDX3YO15523 660 aaKnown RBP12.93□□□□□ -0.34
RPS3-217ENST00000531188 CILPO75339 1184 aa12.93□□□□□ -0.34
RPS3-217ENST00000531188 STAU1O95793 577 aaKnown RBP12.93□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 36.3 ms