RNA–Protein interactions for RNA: ENST00000530784.1

CSDE1-213, Transcript of cold shock domain containing E1, humanhuman

TSL 2

Gene CSDE1, Length 545 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSDE1-213ENST00000530784 NCR1O76036 304 aa8.96□□□□□ -0.98
CSDE1-213ENST00000530784 MTM1Q13496 603 aa8.96□□□□□ -0.98
CSDE1-213ENST00000530784 MED25Q71SY5 747 aa8.96□□□□□ -0.98
CSDE1-213ENST00000530784 SUGP2Q8IX01 1082 aaKnown RBP eCLIP8.96□□□□□ -0.98
CSDE1-213ENST00000530784 RAB24Q969Q5 203 aa8.96□□□□□ -0.98
CSDE1-213ENST00000530784 MLST8Q9BVC4 326 aa8.96□□□□□ -0.98
CSDE1-213ENST00000530784 BRINP2Q9C0B6 783 aa8.96□□□□□ -0.98
CSDE1-213ENST00000530784 AKIP1Q9NQ31 210 aa8.96□□□□□ -0.98
CSDE1-213ENST00000530784 HOMER2Q9NSB8 354 aa8.96□□□□□ -0.98
CSDE1-213ENST00000530784 LIMCH1Q9UPQ0 1083 aa8.96□□□□□ -0.98
CSDE1-213ENST00000530784 PCDHA13Q9Y5I0 950 aa8.96□□□□□ -0.98
CSDE1-213ENST00000530784 USP54Q70EL1 1684 aa8.96□□□□□ -0.98
CSDE1-213ENST00000530784 MYBBP1AQ9BQG0 1328 aaKnown RBP8.96□□□□□ -0.98
CSDE1-213ENST00000530784 SBF2Q86WG5 1849 aa8.96□□□□□ -0.98
CSDE1-213ENST00000530784 CASZ1Q86V15 1759 aa8.95□□□□□ -0.98
CSDE1-213ENST00000530784 RNASET2O00584 256 aaKnown RBP8.95□□□□□ -0.98
CSDE1-213ENST00000530784 ITGB1P05556 798 aa8.95□□□□□ -0.98
CSDE1-213ENST00000530784 LAG3P18627 525 aa8.95□□□□□ -0.98
CSDE1-213ENST00000530784 DDCP20711 480 aa8.95□□□□□ -0.98
CSDE1-213ENST00000530784 SLC16A1P53985 500 aa8.95□□□□□ -0.98
CSDE1-213ENST00000530784 ATP8B2P98198 1209 aa8.95□□□□□ -0.98
CSDE1-213ENST00000530784 UBXN2BQ14CS0 331 aa8.95□□□□□ -0.98
CSDE1-213ENST00000530784 TXNRD1Q16881 649 aa8.95□□□□□ -0.98
CSDE1-213ENST00000530784 TIGD2Q4W5G0 525 aa8.95□□□□□ -0.98
CSDE1-213ENST00000530784 ZNF529Q6P280 563 aa8.95□□□□□ -0.98
CSDE1-213ENST00000530784 DRC7Q8IY82 874 aa8.95□□□□□ -0.98
CSDE1-213ENST00000530784 STK32BQ9NY57 414 aa8.95□□□□□ -0.98
CSDE1-213ENST00000530784 IPPQ9Y573 584 aa8.95□□□□□ -0.98
CSDE1-213ENST00000530784 TONSLQ96HA7 1378 aa8.95□□□□□ -0.98
CSDE1-213ENST00000530784 EDC4Q6P2E9 1401 aaKnown RBP8.95□□□□□ -0.98
CSDE1-213ENST00000530784 TEX33O43247 280 aa8.94□□□□□ -0.98
CSDE1-213ENST00000530784 POMCP01189 267 aa8.94□□□□□ -0.98
CSDE1-213ENST00000530784 IBSPP21815 317 aaPredicted RBP8.94□□□□□ -0.98
CSDE1-213ENST00000530784 EDNRBP24530 442 aa8.94□□□□□ -0.98
CSDE1-213ENST00000530784 YY1P25490 414 aa8.94□□□□□ -0.98
CSDE1-213ENST00000530784 HMGA2P52926 109 aa8.94□□□□□ -0.98
CSDE1-213ENST00000530784 KIF23Q02241 960 aaPredicted RBP8.94□□□□□ -0.98
CSDE1-213ENST00000530784 BRDTQ58F21 947 aaPredicted RBP8.94□□□□□ -0.98
CSDE1-213ENST00000530784 LRRC55Q6ZSA7 311 aa8.94□□□□□ -0.98
CSDE1-213ENST00000530784 SEM1Q6ZVN7 128 aa8.94□□□□□ -0.98
CSDE1-213ENST00000530784 UBE3BQ7Z3V4 1068 aa8.94□□□□□ -0.98
CSDE1-213ENST00000530784 AMER2Q8N7J2 671 aa8.94□□□□□ -0.98
CSDE1-213ENST00000530784 PROKR1Q8TCW9 393 aa8.94□□□□□ -0.98
CSDE1-213ENST00000530784 MYEOVQ96EZ4 313 aa8.94□□□□□ -0.98
CSDE1-213ENST00000530784 SLC13A1Q9BZW2 595 aa8.94□□□□□ -0.98
CSDE1-213ENST00000530784 FBXO34Q9NWN3 711 aa8.94□□□□□ -0.98
CSDE1-213ENST00000530784 NOP58Q9Y2X3 529 aaKnown RBP8.94□□□□□ -0.98
CSDE1-213ENST00000530784 NHSQ6T4R5 1651 aa8.94□□□□□ -0.98
CSDE1-213ENST00000530784 RGPD5Q99666 1765 aa8.94□□□□□ -0.98
CSDE1-213ENST00000530784 GAGE12BA1L429 117 aa8.93□□□□□ -0.98
CSDE1-213ENST00000530784 GAGE12HA6NDE8 117 aa8.93□□□□□ -0.98
CSDE1-213ENST00000530784 HTRA2O43464 458 aaPredicted RBP8.93□□□□□ -0.98
CSDE1-213ENST00000530784 LPXNO60711 386 aa8.93□□□□□ -0.98
CSDE1-213ENST00000530784 NDUFA10O95299 355 aa8.93□□□□□ -0.98
CSDE1-213ENST00000530784 SLC6A2P23975 617 aa8.93□□□□□ -0.98
CSDE1-213ENST00000530784 CCND1P24385 295 aa8.93□□□□□ -0.98
CSDE1-213ENST00000530784 TARDBPQ13148 414 aaKnown RBP eCLIP8.93□□□□□ -0.98
CSDE1-213ENST00000530784 C3orf36Q3SXR2 165 aa8.93□□□□□ -0.98
CSDE1-213ENST00000530784 AGAP9Q5VTM2 703 aa8.93□□□□□ -0.98
CSDE1-213ENST00000530784 Q6ZPA2 131 aa8.93□□□□□ -0.98
CSDE1-213ENST00000530784 MIGA2Q7L4E1 593 aa8.93□□□□□ -0.98
CSDE1-213ENST00000530784 PLXDC1Q8IUK5 500 aa8.93□□□□□ -0.98
CSDE1-213ENST00000530784 ULK2Q8IYT8 1036 aa8.93□□□□□ -0.98
CSDE1-213ENST00000530784 RPUSD2Q8IZ73 545 aaKnown RBP8.93□□□□□ -0.98
CSDE1-213ENST00000530784 HDAC10Q969S8 669 aa8.93□□□□□ -0.98
CSDE1-213ENST00000530784 COA7Q96BR5 231 aa8.93□□□□□ -0.98
CSDE1-213ENST00000530784 TERF2IPQ9NYB0 399 aa8.93□□□□□ -0.98
CSDE1-213ENST00000530784 FAM30AQ9NZY2 134 aa8.93□□□□□ -0.98
CSDE1-213ENST00000530784 SERPINB13Q9UIV8 391 aa8.93□□□□□ -0.98
CSDE1-213ENST00000530784 HS3ST4Q9Y661 456 aa8.93□□□□□ -0.98
CSDE1-213ENST00000530784 A0A1W2PP64 1363 aa8.93□□□□□ -0.98
CSDE1-213ENST00000530784 CENPVL1A0A0U1RR11 272 aa8.92□□□□□ -0.98
CSDE1-213ENST00000530784 CCDC154A6NI56 674 aa8.92□□□□□ -0.98
CSDE1-213ENST00000530784 ABHD16AO95870 558 aa8.92□□□□□ -0.98
CSDE1-213ENST00000530784 IL10RAQ13651 578 aa8.92□□□□□ -0.98
CSDE1-213ENST00000530784 SLC15A2Q16348 729 aa8.92□□□□□ -0.98
CSDE1-213ENST00000530784 BEAN1Q3B7T3 259 aa8.92□□□□□ -0.98
CSDE1-213ENST00000530784 TSHZ3Q63HK5 1081 aa8.92□□□□□ -0.98
CSDE1-213ENST00000530784 KCNV1Q6PIU1 500 aa8.92□□□□□ -0.98
CSDE1-213ENST00000530784 RHOT2Q8IXI1 618 aa8.92□□□□□ -0.98
CSDE1-213ENST00000530784 SLC12A5Q9H2X9 1139 aa8.92□□□□□ -0.98
CSDE1-213ENST00000530784 TDP1Q9NUW8 608 aa8.92□□□□□ -0.98
CSDE1-213ENST00000530784 LTN1O94822 1766 aa8.91□□□□□ -0.98
CSDE1-213ENST00000530784 MYOM1P52179 1685 aa8.91□□□□□ -0.98
CSDE1-213ENST00000530784 TCRBV7S2A1N4TA0A589 114 aa8.91□□□□□ -0.98
CSDE1-213ENST00000530784 TMEM200CA6NKL6 621 aa8.91□□□□□ -0.98
CSDE1-213ENST00000530784 PRSS23O95084 383 aa8.91□□□□□ -0.98
CSDE1-213ENST00000530784 SPATA31D3P0C874 917 aa8.91□□□□□ -0.98
CSDE1-213ENST00000530784 TGFB2P61812 414 aa8.91□□□□□ -0.98
CSDE1-213ENST00000530784 LY6G5CQ5SRR4 150 aa8.91□□□□□ -0.98
CSDE1-213ENST00000530784 SPATA31D4Q6ZUB0 917 aa8.91□□□□□ -0.98
CSDE1-213ENST00000530784 RSPH3Q86UC2 560 aa8.91□□□□□ -0.98
CSDE1-213ENST00000530784 OR56A1Q8NGH5 318 aa8.91□□□□□ -0.98
CSDE1-213ENST00000530784 TMX3Q96JJ7 454 aa8.91□□□□□ -0.98
CSDE1-213ENST00000530784 PUS7Q96PZ0 661 aaKnown RBP8.91□□□□□ -0.98
CSDE1-213ENST00000530784 KLHL11Q9NVR0 708 aa8.91□□□□□ -0.98
CSDE1-213ENST00000530784 ATP11BQ9Y2G3 1177 aa8.91□□□□□ -0.98
CSDE1-213ENST00000530784 MAP3K2Q9Y2U5 619 aa8.91□□□□□ -0.98
CSDE1-213ENST00000530784 SPEF1Q9Y4P9 236 aa8.91□□□□□ -0.98
CSDE1-213ENST00000530784 PPFIA4O75335 1185 aa8.9□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 87.2 ms