RNA–Protein interactions for RNA: ENST00000529637.5

USP48-213, Transcript of ubiquitin specific peptidase 48, humanhuman

TSL 1 (best) BASIC

Gene USP48, Length 3,228 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP48-213ENST00000529637 TCEA3O75764 348 aa15□□□□□ -0.01
USP48-213ENST00000529637 DCTN3O75935 186 aa15□□□□□ -0.01
USP48-213ENST00000529637 NPTX2P47972 431 aa15□□□□□ -0.01
USP48-213ENST00000529637 CDR2Q01850 454 aa15□□□□□ -0.01
USP48-213ENST00000529637 CLNKQ7Z7G1 428 aa15□□□□□ -0.01
USP48-213ENST00000529637 NIM1KQ8IY84 436 aa15□□□□□ -0.01
USP48-213ENST00000529637 ANKRD35Q8N283 1001 aa15□□□□□ -0.01
USP48-213ENST00000529637 LMCD1Q9NZU5 365 aa15□□□□□ -0.01
USP48-213ENST00000529637 TBX20Q9UMR3 447 aa15□□□□□ -0.01
USP48-213ENST00000529637 WASF2Q9Y6W5 498 aa15□□□□□ -0.01
USP48-213ENST00000529637 TRAFD1O14545 582 aaPredicted RBP15□□□□□ -0.01
USP48-213ENST00000529637 TJP3O95049 919 aa15□□□□□ -0.01
USP48-213ENST00000529637 CYP1A1P04798 512 aaPredicted RBP15□□□□□ -0.01
USP48-213ENST00000529637 CYP11B1P15538 503 aa15□□□□□ -0.01
USP48-213ENST00000529637 SSTR3P32745 418 aaPredicted RBP15□□□□□ -0.01
USP48-213ENST00000529637 NEK3P51956 506 aa15□□□□□ -0.01
USP48-213ENST00000529637 CUL3Q13618 768 aa15□□□□□ -0.01
USP48-213ENST00000529637 PCNX4Q63HM2 1172 aa15□□□□□ -0.01
USP48-213ENST00000529637 ARHGAP22Q7Z5H3 698 aa15□□□□□ -0.01
USP48-213ENST00000529637 TRABD2AQ86V40 505 aa15□□□□□ -0.01
USP48-213ENST00000529637 ITFG2Q969R8 447 aa15□□□□□ -0.01
USP48-213ENST00000529637 RBM41Q96IZ5 413 aaKnown RBP15□□□□□ -0.01
USP48-213ENST00000529637 FAM213AQ9BRX8 229 aa15□□□□□ -0.01
USP48-213ENST00000529637 ARL8BQ9NVJ2 186 aa15□□□□□ -0.01
USP48-213ENST00000529637 ANAPC7Q9UJX3 599 aa15□□□□□ -0.01
USP48-213ENST00000529637 A0A1W2PPM1 405 aa14.99□□□□□ -0.01
USP48-213ENST00000529637 GSTTP1A0A1W2PQM5 241 aa14.99□□□□□ -0.01
USP48-213ENST00000529637 P4HA2O15460 535 aa14.99□□□□□ -0.01
USP48-213ENST00000529637 GTF2BQ00403 316 aa14.99□□□□□ -0.01
USP48-213ENST00000529637 RFWD2Q8NHY2 731 aa14.99□□□□□ -0.01
USP48-213ENST00000529637 GATA6Q92908 595 aa14.99□□□□□ -0.01
USP48-213ENST00000529637 KIAA1586Q9HCI6 787 aa14.99□□□□□ -0.01
USP48-213ENST00000529637 GABBR1Q9UBS5 961 aa14.99□□□□□ -0.01
USP48-213ENST00000529637 UBIAD1Q9Y5Z9 338 aa14.99□□□□□ -0.01
USP48-213ENST00000529637 CFAP69A5D8W1 941 aa14.99□□□□□ -0.01
USP48-213ENST00000529637 FSCN2O14926 492 aa14.99□□□□□ -0.01
USP48-213ENST00000529637 CCNE2O96020 404 aa14.99□□□□□ -0.01
USP48-213ENST00000529637 ATF2P15336 505 aa14.99□□□□□ -0.01
USP48-213ENST00000529637 FMO1Q01740 532 aa14.99□□□□□ -0.01
USP48-213ENST00000529637 MTMR2Q13614 643 aa14.99□□□□□ -0.01
USP48-213ENST00000529637 FASTKD3Q14CZ7 662 aaKnown RBP14.99□□□□□ -0.01
USP48-213ENST00000529637 LRRC74BQ6ZQY2 392 aa14.99□□□□□ -0.01
USP48-213ENST00000529637 FAM71AQ8IYT1 594 aa14.99□□□□□ -0.01
USP48-213ENST00000529637 FBXL13Q8NEE6 735 aa14.99□□□□□ -0.01
USP48-213ENST00000529637 TRABDQ9H4I3 376 aa14.99□□□□□ -0.01
USP48-213ENST00000529637 TLE6Q9H808 572 aa14.99□□□□□ -0.01
USP48-213ENST00000529637 WNT10BO00744 389 aa14.98□□□□□ -0.01
USP48-213ENST00000529637 ZBED4O75132 1171 aa14.98□□□□□ -0.01
USP48-213ENST00000529637 ADSSP30520 456 aa14.98□□□□□ -0.01
USP48-213ENST00000529637 MAPK4P31152 587 aa14.98□□□□□ -0.01
USP48-213ENST00000529637 BAATQ14032 418 aaPredicted RBP14.98□□□□□ -0.01
USP48-213ENST00000529637 PGM5Q15124 567 aa14.98□□□□□ -0.01
USP48-213ENST00000529637 VTI1AQ96AJ9 217 aa14.98□□□□□ -0.01
USP48-213ENST00000529637 KRT82Q9NSB4 513 aa14.98□□□□□ -0.01
USP48-213ENST00000529637 RAB20Q9NX57 234 aa14.98□□□□□ -0.01
USP48-213ENST00000529637 NOCTQ9UK39 431 aaKnown RBP14.98□□□□□ -0.01
USP48-213ENST00000529637 SH3BP1Q9Y3L3 701 aa14.98□□□□□ -0.01
USP48-213ENST00000529637 TNNI1P19237 187 aa14.98□□□□□ -0.01
USP48-213ENST00000529637 CA4P22748 312 aa14.98□□□□□ -0.01
USP48-213ENST00000529637 GSTT1P30711 240 aa14.98□□□□□ -0.01
USP48-213ENST00000529637 SPARCL1Q14515 664 aa14.98□□□□□ -0.01
USP48-213ENST00000529637 PDK4Q16654 411 aa14.98□□□□□ -0.01
USP48-213ENST00000529637 MAPK6Q16659 721 aa14.98□□□□□ -0.01
USP48-213ENST00000529637 FBXO41Q8TF61 875 aa14.98□□□□□ -0.01
USP48-213ENST00000529637 TRAIPQ9BWF2 469 aa14.98□□□□□ -0.01
USP48-213ENST00000529637 ALG13Q9NP73 1137 aaKnown RBP14.98□□□□□ -0.01
USP48-213ENST00000529637 SEPT9Q9UHD8 586 aaPredicted RBP14.98□□□□□ -0.01
USP48-213ENST00000529637 MROH7Q68CQ1 1323 aa14.98□□□□□ -0.01
USP48-213ENST00000529637 EXOC1LA0A1B0GW35 172 aa14.98□□□□□ -0.01
USP48-213ENST00000529637 WDR46O15213 610 aaKnown RBP14.98□□□□□ -0.01
USP48-213ENST00000529637 KRT15P19012 456 aa14.98□□□□□ -0.01
USP48-213ENST00000529637 RASSF2P50749 326 aa14.98□□□□□ -0.01
USP48-213ENST00000529637 PTK6Q13882 451 aa14.98□□□□□ -0.01
USP48-213ENST00000529637 LLGL2Q6P1M3 1020 aa14.98□□□□□ -0.01
USP48-213ENST00000529637 CPA5Q8WXQ8 436 aa14.98□□□□□ -0.01
USP48-213ENST00000529637 PDCD2LQ9BRP1 358 aa14.98□□□□□ -0.01
USP48-213ENST00000529637 CYLDQ9NQC7 956 aa14.98□□□□□ -0.01
USP48-213ENST00000529637 C2orf71A6NGG8 1288 aa14.97□□□□□ -0.01
USP48-213ENST00000529637 GSC2O15499 205 aa14.97□□□□□ -0.01
USP48-213ENST00000529637 HARSP12081 509 aaKnown RBP14.97□□□□□ -0.01
USP48-213ENST00000529637 SKIP12755 728 aa14.97□□□□□ -0.01
USP48-213ENST00000529637 ETS2P15036 469 aa14.97□□□□□ -0.01
USP48-213ENST00000529637 OCRLQ01968 901 aa14.97□□□□□ -0.01
USP48-213ENST00000529637 SWSAP1Q6NVH7 229 aa14.97□□□□□ -0.01
USP48-213ENST00000529637 SV2AQ7L0J3 742 aa14.97□□□□□ -0.01
USP48-213ENST00000529637 USP37Q86T82 979 aa14.97□□□□□ -0.01
USP48-213ENST00000529637 C4orf19Q8IY42 314 aa14.97□□□□□ -0.01
USP48-213ENST00000529637 RTKN2Q8IZC4 609 aa14.97□□□□□ -0.01
USP48-213ENST00000529637 TMEM161BQ8NDZ6 487 aa14.97□□□□□ -0.01
USP48-213ENST00000529637 MAIP1Q8WWC4 291 aa14.97□□□□□ -0.01
USP48-213ENST00000529637 SLCO2A1Q92959 643 aa14.97□□□□□ -0.01
USP48-213ENST00000529637 RBM15Q96T37 977 aaKnown RBP eCLIP14.97□□□□□ -0.016e-7■■■□□ 16.4
USP48-213ENST00000529637 PDGFDQ9GZP0 370 aaPredicted RBP14.97□□□□□ -0.01
USP48-213ENST00000529637 RPAP3Q9H6T3 665 aaPredicted RBP14.97□□□□□ -0.01
USP48-213ENST00000529637 FBXO6Q9NRD1 293 aaPredicted RBP14.97□□□□□ -0.01
USP48-213ENST00000529637 PLA2G6O60733 806 aa14.97□□□□□ -0.01
USP48-213ENST00000529637 MAPTP10636 758 aaKnown RBP14.97□□□□□ -0.01
USP48-213ENST00000529637 PYGBP11216 843 aa14.97□□□□□ -0.01
USP48-213ENST00000529637 GZMAP12544 262 aa14.97□□□□□ -0.01
USP48-213ENST00000529637 JAK3P52333 1124 aa14.97□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms