RNA–Protein interactions for RNA: ENST00000528165.5

CAPN1-214, Transcript of calpain 1, humanhuman

TSL 2

Gene CAPN1, Length 2,828 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-214ENST00000528165 ETS1P14921 441 aa15.44■□□□□ 0.06
CAPN1-214ENST00000528165 AMPD1P23109 780 aa15.44■□□□□ 0.06
CAPN1-214ENST00000528165 PHBP35232 272 aa15.44■□□□□ 0.06
CAPN1-214ENST00000528165 GPC3P51654 580 aa15.44■□□□□ 0.06
CAPN1-214ENST00000528165 DSG1Q02413 1049 aa15.44■□□□□ 0.06
CAPN1-214ENST00000528165 CNPY1Q3B7I2 92 aa15.44■□□□□ 0.06
CAPN1-214ENST00000528165 EAPPQ56P03 285 aaPredicted RBP15.44■□□□□ 0.06
CAPN1-214ENST00000528165 IZUMO2Q6UXV1 221 aa15.44■□□□□ 0.06
CAPN1-214ENST00000528165 FAM43BQ6ZT52 329 aaPredicted RBP15.44■□□□□ 0.06
CAPN1-214ENST00000528165 CBWD2Q8IUF1 395 aa15.44■□□□□ 0.06
CAPN1-214ENST00000528165 ZNF276Q8N554 614 aa15.44■□□□□ 0.06
CAPN1-214ENST00000528165 FAM210AQ96ND0 272 aa15.44■□□□□ 0.06
CAPN1-214ENST00000528165 C12orf65Q9H3J6 166 aaKnown RBP15.44■□□□□ 0.06
CAPN1-214ENST00000528165 SLC17A7Q9P2U7 560 aa15.44■□□□□ 0.06
CAPN1-214ENST00000528165 CFBP00751 764 aa15.44■□□□□ 0.06
CAPN1-214ENST00000528165 MAPTP10636 758 aaKnown RBP15.44■□□□□ 0.06
CAPN1-214ENST00000528165 PSMC4P43686 418 aa15.44■□□□□ 0.06
CAPN1-214ENST00000528165 UBXN2AP68543 259 aa15.44■□□□□ 0.06
CAPN1-214ENST00000528165 SNRNP35Q16560 246 aaKnown RBP15.44■□□□□ 0.06
CAPN1-214ENST00000528165 FBXL13Q8NEE6 735 aa15.44■□□□□ 0.06
CAPN1-214ENST00000528165 CCDC110Q8TBZ0 833 aa15.44■□□□□ 0.06
CAPN1-214ENST00000528165 TAS1R2Q8TE23 839 aa15.44■□□□□ 0.06
CAPN1-214ENST00000528165 AZIN2Q96A70 460 aa15.44■□□□□ 0.06
CAPN1-214ENST00000528165 ALKBH8Q96BT7 664 aaKnown RBP15.44■□□□□ 0.06
CAPN1-214ENST00000528165 ZNF577Q9BSK1 485 aa15.44■□□□□ 0.06
CAPN1-214ENST00000528165 TMEM8AQ9HCN3 771 aa15.44■□□□□ 0.06
CAPN1-214ENST00000528165 RAB20Q9NX57 234 aa15.44■□□□□ 0.06
CAPN1-214ENST00000528165 ZNFX1Q9P2E3 1918 aaKnown RBP15.44■□□□□ 0.06
CAPN1-214ENST00000528165 PYGLP06737 847 aa15.44■□□□□ 0.06
CAPN1-214ENST00000528165 MCL1Q07820 350 aa15.44■□□□□ 0.06
CAPN1-214ENST00000528165 NFX1Q12986 1120 aaKnown RBP15.44■□□□□ 0.06
CAPN1-214ENST00000528165 EFTUD2Q15029 972 aaKnown RBP eCLIP15.44■□□□□ 0.063e-6■■■■■ 32.5
CAPN1-214ENST00000528165 CCDC142Q17RM4 750 aa15.44■□□□□ 0.06
CAPN1-214ENST00000528165 C6orf163Q5TEZ5 329 aa15.44■□□□□ 0.06
CAPN1-214ENST00000528165 LIN9Q5TKA1 542 aa15.44■□□□□ 0.06
CAPN1-214ENST00000528165 OGFOD1Q8N543 542 aa15.44■□□□□ 0.06
CAPN1-214ENST00000528165 ALLCQ8N6M5 410 aa15.44■□□□□ 0.06
CAPN1-214ENST00000528165 NDNQ99608 321 aa15.44■□□□□ 0.06
CAPN1-214ENST00000528165 KLF6Q99612 283 aaPredicted RBP15.44■□□□□ 0.06
CAPN1-214ENST00000528165 CENPKQ9BS16 269 aa15.44■□□□□ 0.06
CAPN1-214ENST00000528165 CCDC28BQ9BUN5 200 aa15.44■□□□□ 0.06
CAPN1-214ENST00000528165 SPATA16Q9BXB7 569 aa15.44■□□□□ 0.06
CAPN1-214ENST00000528165 RANBP17Q9H2T7 1088 aaKnown RBP15.44■□□□□ 0.06
CAPN1-214ENST00000528165 KLHL11Q9NVR0 708 aa15.44■□□□□ 0.06
CAPN1-214ENST00000528165 SHOC2Q9UQ13 582 aa15.44■□□□□ 0.06
CAPN1-214ENST00000528165 F8W8V4 182 aa15.43■□□□□ 0.06
CAPN1-214ENST00000528165 GOLGA8SH3BPF8 625 aa15.43■□□□□ 0.06
CAPN1-214ENST00000528165 GOLGA8MH3BSY2 632 aa15.43■□□□□ 0.06
CAPN1-214ENST00000528165 CREB3O43889 395 aa15.43■□□□□ 0.06
CAPN1-214ENST00000528165 KRT10P13645 584 aa15.43■□□□□ 0.06
CAPN1-214ENST00000528165 ATF7P17544 494 aaPredicted RBP15.43■□□□□ 0.06
CAPN1-214ENST00000528165 RAP1GDS1P52306 607 aa15.43■□□□□ 0.06
CAPN1-214ENST00000528165 HIF1AQ16665 826 aa15.43■□□□□ 0.06
CAPN1-214ENST00000528165 ZC3H12AQ5D1E8 599 aaKnown RBP15.43■□□□□ 0.06
CAPN1-214ENST00000528165 RNASEH2BQ5TBB1 312 aaKnown RBP15.43■□□□□ 0.06
CAPN1-214ENST00000528165 HAUS6Q7Z4H7 955 aa15.43■□□□□ 0.06
CAPN1-214ENST00000528165 BANPQ8N9N5 519 aa15.43■□□□□ 0.06
CAPN1-214ENST00000528165 SMC1BQ8NDV3 1235 aa15.43■□□□□ 0.06
CAPN1-214ENST00000528165 OXNAD1Q96HP4 312 aaPredicted RBP15.43■□□□□ 0.06
CAPN1-214ENST00000528165 KCNK13Q9HB14 408 aa15.43■□□□□ 0.06
CAPN1-214ENST00000528165 RABGEF1Q9UJ41 708 aa15.43■□□□□ 0.06
CAPN1-214ENST00000528165 COQ4Q9Y3A0 265 aa15.43■□□□□ 0.06
CAPN1-214ENST00000528165 GREB1LQ9C091 1923 aaPredicted RBP15.43■□□□□ 0.06
CAPN1-214ENST00000528165 PI4K2BG5E9Z4 385 aa15.43■□□□□ 0.06
CAPN1-214ENST00000528165 FCHO1O14526 889 aa15.43■□□□□ 0.06
CAPN1-214ENST00000528165 NDC80O14777 642 aa15.43■□□□□ 0.06
CAPN1-214ENST00000528165 BANF1O75531 89 aa15.43■□□□□ 0.06
CAPN1-214ENST00000528165 CIB2O75838 187 aa15.43■□□□□ 0.06
CAPN1-214ENST00000528165 TGDSO95455 350 aa15.43■□□□□ 0.06
CAPN1-214ENST00000528165 ANPEPP15144 967 aa15.43■□□□□ 0.06
CAPN1-214ENST00000528165 CPA2P48052 419 aa15.43■□□□□ 0.06
CAPN1-214ENST00000528165 GPX6P59796 221 aa15.43■□□□□ 0.06
CAPN1-214ENST00000528165 TFDP1Q14186 410 aa15.43■□□□□ 0.06
CAPN1-214ENST00000528165 TTC7BQ86TV6 843 aa15.43■□□□□ 0.06
CAPN1-214ENST00000528165 DDX51Q8N8A6 666 aaKnown RBP eCLIP15.43■□□□□ 0.06
CAPN1-214ENST00000528165 OPTNQ96CV9 577 aa15.43■□□□□ 0.06
CAPN1-214ENST00000528165 TUBGCP5Q96RT8 1024 aa15.43■□□□□ 0.06
CAPN1-214ENST00000528165 PAFAH2Q99487 392 aa15.43■□□□□ 0.06
CAPN1-214ENST00000528165 TEKT3Q9BXF9 490 aa15.43■□□□□ 0.06
CAPN1-214ENST00000528165 UBE2OQ9C0C9 1292 aaKnown RBP15.43■□□□□ 0.06
CAPN1-214ENST00000528165 NDE1Q9NXR1 346 aa15.43■□□□□ 0.06
CAPN1-214ENST00000528165 FETUBQ9UGM5 382 aa15.43■□□□□ 0.06
CAPN1-214ENST00000528165 SLC4A7Q9Y6M7 1214 aa15.43■□□□□ 0.06
CAPN1-214ENST00000528165 B2RBV5 119 aa15.42■□□□□ 0.06
CAPN1-214ENST00000528165 NDUFB10O96000 172 aa15.42■□□□□ 0.06
CAPN1-214ENST00000528165 DLDP09622 509 aaKnown RBP15.42■□□□□ 0.06
CAPN1-214ENST00000528165 CDC42EP5Q6NZY7 148 aa15.42■□□□□ 0.06
CAPN1-214ENST00000528165 ADGRD1Q6QNK2 874 aa15.42■□□□□ 0.06
CAPN1-214ENST00000528165 MYPNQ86TC9 1320 aa15.42■□□□□ 0.06
CAPN1-214ENST00000528165 ATP11CQ8NB49 1132 aa15.42■□□□□ 0.06
CAPN1-214ENST00000528165 PYROXD1Q8WU10 500 aa15.42■□□□□ 0.06
CAPN1-214ENST00000528165 FNBP1Q96RU3 617 aa15.42■□□□□ 0.06
CAPN1-214ENST00000528165 ECSITQ9BQ95 431 aa15.42■□□□□ 0.06
CAPN1-214ENST00000528165 ZNF335Q9H4Z2 1342 aaPredicted RBP15.42■□□□□ 0.06
CAPN1-214ENST00000528165 ARMCX1Q9P291 453 aa15.42■□□□□ 0.06
CAPN1-214ENST00000528165 POLLQ9UGP5 575 aa15.42■□□□□ 0.06
CAPN1-214ENST00000528165 SEC23IPQ9Y6Y8 1000 aaKnown RBP15.42■□□□□ 0.06
CAPN1-214ENST00000528165 C2orf71A6NGG8 1288 aa15.42■□□□□ 0.06
CAPN1-214ENST00000528165 H3BRJ5 948 aa15.42■□□□□ 0.06
CAPN1-214ENST00000528165 MAGEC1O60732 1142 aa15.42■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 22.6 ms