RNA–Protein interactions for RNA: ENST00000527889.5

CD44-226, Transcript of CD44 molecule (Indian blood group), humanhuman

TSL 3

Gene CD44, Length 543 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-226ENST00000527889 VAV3Q9UKW4 847 aa4.59□□□□□ -1.67
CD44-226ENST00000527889 PCDHA12Q9UN75 941 aa4.59□□□□□ -1.67
CD44-226ENST00000527889 AGTPBP1Q9UPW5 1226 aa4.59□□□□□ -1.67
CD44-226ENST00000527889 SH3BP1Q9Y3L3 701 aa4.59□□□□□ -1.67
CD44-226ENST00000527889 PCDHB12Q9Y5F1 795 aa4.59□□□□□ -1.67
CD44-226ENST00000527889 TET1Q8NFU7 2136 aa4.58□□□□□ -1.68
CD44-226ENST00000527889 ASTN1O14525 1302 aa4.58□□□□□ -1.68
CD44-226ENST00000527889 KDM3AQ9Y4C1 1321 aa4.58□□□□□ -1.68
CD44-226ENST00000527889 CCDC189A1A4V9 331 aa4.58□□□□□ -1.68
CD44-226ENST00000527889 BECN2A8MW95 431 aa4.58□□□□□ -1.68
CD44-226ENST00000527889 BTBD19C9JJ37 291 aa4.58□□□□□ -1.68
CD44-226ENST00000527889 H0YGN5 161 aa4.58□□□□□ -1.68
CD44-226ENST00000527889 PDHXO00330 501 aa4.58□□□□□ -1.68
CD44-226ENST00000527889 MEIS1O00470 390 aa4.58□□□□□ -1.68
CD44-226ENST00000527889 TBX3O15119 743 aa4.58□□□□□ -1.68
CD44-226ENST00000527889 KLRC4O43908 158 aa4.58□□□□□ -1.68
CD44-226ENST00000527889 COBLO75128 1261 aa4.58□□□□□ -1.68
CD44-226ENST00000527889 PSMD10O75832 226 aa4.58□□□□□ -1.68
CD44-226ENST00000527889 LDHAP00338 332 aaKnown RBP4.58□□□□□ -1.68
CD44-226ENST00000527889 F2P00734 622 aa4.58□□□□□ -1.68
CD44-226ENST00000527889 IGHA1P01876 353 aa4.58□□□□□ -1.68
CD44-226ENST00000527889 RPN1P04843 607 aaKnown RBP4.58□□□□□ -1.68
CD44-226ENST00000527889 CETPP11597 493 aa4.58□□□□□ -1.68
CD44-226ENST00000527889 ITGB5P18084 799 aa4.58□□□□□ -1.68
CD44-226ENST00000527889 CCND2P30279 289 aa4.58□□□□□ -1.68
CD44-226ENST00000527889 ASPAP45381 313 aa4.58□□□□□ -1.68
CD44-226ENST00000527889 SARSP49591 514 aaKnown RBP4.58□□□□□ -1.68
CD44-226ENST00000527889 GTF2A2P52657 109 aa4.58□□□□□ -1.68
CD44-226ENST00000527889 STX17P56962 302 aa4.58□□□□□ -1.68
CD44-226ENST00000527889 HUNKP57058 714 aa4.58□□□□□ -1.68
CD44-226ENST00000527889 PSMC6P62333 389 aa4.58□□□□□ -1.68
CD44-226ENST00000527889 FKBP1BP68106 108 aa4.58□□□□□ -1.68
CD44-226ENST00000527889 ASIC1P78348 528 aa4.58□□□□□ -1.68
CD44-226ENST00000527889 GUCY1A3Q02108 690 aa4.58□□□□□ -1.68
CD44-226ENST00000527889 CYP4A11Q02928 519 aa4.58□□□□□ -1.68
CD44-226ENST00000527889 MORC3Q14149 939 aa4.58□□□□□ -1.68
CD44-226ENST00000527889 CTTNQ14247 550 aaKnown RBP4.58□□□□□ -1.68
CD44-226ENST00000527889 UVSSAQ2YD98 709 aa4.58□□□□□ -1.68
CD44-226ENST00000527889 GFOD2Q3B7J2 385 aa4.58□□□□□ -1.68
CD44-226ENST00000527889 NT5DC1Q5TFE4 455 aa4.58□□□□□ -1.68
CD44-226ENST00000527889 KLHL10Q6JEL2 608 aa4.58□□□□□ -1.68
CD44-226ENST00000527889 CYP4F22Q6NT55 531 aa4.58□□□□□ -1.68
CD44-226ENST00000527889 PPP4R4Q6NUP7 873 aa4.58□□□□□ -1.68
CD44-226ENST00000527889 LETMD1Q6P1Q0 360 aa4.58□□□□□ -1.68
CD44-226ENST00000527889 KCNT2Q6UVM3 1135 aa4.58□□□□□ -1.68
CD44-226ENST00000527889 USP53Q70EK8 1073 aa4.58□□□□□ -1.68
CD44-226ENST00000527889 FASTKD5Q7L8L6 764 aaKnown RBP4.58□□□□□ -1.68
CD44-226ENST00000527889 RASAL3Q86YV0 1011 aa4.58□□□□□ -1.68
CD44-226ENST00000527889 ELOA2Q8IYF1 753 aaPredicted RBP4.58□□□□□ -1.68
CD44-226ENST00000527889 ANKRD35Q8N283 1001 aa4.58□□□□□ -1.68
CD44-226ENST00000527889 FAM43AQ8N2R8 423 aa4.58□□□□□ -1.68
CD44-226ENST00000527889 NXPE1Q8N323 547 aa4.58□□□□□ -1.68
CD44-226ENST00000527889 FIBCD1Q8N539 461 aa4.58□□□□□ -1.68
CD44-226ENST00000527889 MB21D1Q8N884 522 aa4.58□□□□□ -1.68
CD44-226ENST00000527889 CHST13Q8NET6 341 aa4.58□□□□□ -1.68
CD44-226ENST00000527889 RNF141Q8WVD5 230 aa4.58□□□□□ -1.68
CD44-226ENST00000527889 SNRNP27Q8WVK2 155 aaKnown RBP4.58□□□□□ -1.68
CD44-226ENST00000527889 BRI3BPQ8WY22 251 aa4.58□□□□□ -1.68
CD44-226ENST00000527889 LARP4BQ92615 738 aaKnown RBP4.58□□□□□ -1.68
CD44-226ENST00000527889 RAD54LQ92698 747 aa4.58□□□□□ -1.68
CD44-226ENST00000527889 CCDC34Q96HJ3 373 aa4.58□□□□□ -1.68
CD44-226ENST00000527889 DYDC2Q96IM9 177 aa4.58□□□□□ -1.68
CD44-226ENST00000527889 CAPNS2Q96L46 248 aa4.58□□□□□ -1.68
CD44-226ENST00000527889 FAM20AQ96MK3 541 aa4.58□□□□□ -1.68
CD44-226ENST00000527889 MPHOSPH6Q99547 160 aaKnown RBP4.58□□□□□ -1.68
CD44-226ENST00000527889 EIF2AK1Q9BQI3 630 aaKnown RBP4.58□□□□□ -1.68
CD44-226ENST00000527889 PDCD2LQ9BRP1 358 aa4.58□□□□□ -1.68
CD44-226ENST00000527889 PYM1Q9BRP8 204 aaKnown RBP4.58□□□□□ -1.68
CD44-226ENST00000527889 ZNF577Q9BSK1 485 aa4.58□□□□□ -1.68
CD44-226ENST00000527889 TEKT3Q9BXF9 490 aa4.58□□□□□ -1.68
CD44-226ENST00000527889 RNF208Q9H0X6 261 aa4.58□□□□□ -1.68
CD44-226ENST00000527889 UNC45AQ9H3U1 944 aa4.58□□□□□ -1.68
CD44-226ENST00000527889 AGO4Q9HCK5 861 aaKnown RBP4.58□□□□□ -1.68
CD44-226ENST00000527889 SSU72Q9NP77 194 aaKnown RBP4.58□□□□□ -1.68
CD44-226ENST00000527889 KCNH7Q9NS40 1196 aa4.58□□□□□ -1.68
CD44-226ENST00000527889 FAM105AQ9NUU6 356 aa4.58□□□□□ -1.68
CD44-226ENST00000527889 CYP39A1Q9NYL5 469 aa4.58□□□□□ -1.68
CD44-226ENST00000527889 RGL1Q9NZL6 768 aa4.58□□□□□ -1.68
CD44-226ENST00000527889 RBPJLQ9UBG7 517 aa4.58□□□□□ -1.68
CD44-226ENST00000527889 GDAQ9Y2T3 454 aa4.58□□□□□ -1.68
CD44-226ENST00000527889 GPR55Q9Y2T6 319 aaPredicted RBP4.58□□□□□ -1.68
CD44-226ENST00000527889 UBIAD1Q9Y5Z9 338 aa4.58□□□□□ -1.68
CD44-226ENST00000527889 ACTL7BQ9Y614 415 aa4.58□□□□□ -1.68
CD44-226ENST00000527889 HTTP42858 3142 aa4.58□□□□□ -1.68
CD44-226ENST00000527889 SCN5AQ14524 2016 aa4.58□□□□□ -1.68
CD44-226ENST00000527889 PFASO15067 1338 aa4.57□□□□□ -1.68
CD44-226ENST00000527889 SYNRGQ9UMZ2 1314 aa4.57□□□□□ -1.68
CD44-226ENST00000527889 NPHP3-ACAD11A0A0J9YXS1 232 aa4.57□□□□□ -1.68
CD44-226ENST00000527889 MYMKA6NI61 221 aa4.57□□□□□ -1.68
CD44-226ENST00000527889 C9orf172C9J069 976 aa4.57□□□□□ -1.68
CD44-226ENST00000527889 E9PMD0 336 aa4.57□□□□□ -1.68
CD44-226ENST00000527889 GOLGA6L19H0YKK7 550 aa4.57□□□□□ -1.68
CD44-226ENST00000527889 RBAK-RBAKDNI3L0D1 243 aa4.57□□□□□ -1.68
CD44-226ENST00000527889 IPO5O00410 1097 aaKnown RBP4.57□□□□□ -1.68
CD44-226ENST00000527889 DHX15O43143 795 aaKnown RBP4.57□□□□□ -1.68
CD44-226ENST00000527889 ATP9AO75110 1047 aa4.57□□□□□ -1.68
CD44-226ENST00000527889 SLITRK5O94991 958 aa4.57□□□□□ -1.68
CD44-226ENST00000527889 FKBP9O95302 570 aa4.57□□□□□ -1.68
CD44-226ENST00000527889 ADCY5O95622 1261 aa4.57□□□□□ -1.68
CD44-226ENST00000527889 PGK2P07205 417 aa4.57□□□□□ -1.68
Retrieved 100 of 20,778 RNA–protein pairs in 20.9 ms