RNA–Protein interactions for RNA: ENST00000527064.1

NXF1-204, Transcript of nuclear RNA export factor 1, humanhuman

TSL 2

Gene NXF1, Length 572 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NXF1-204ENST00000527064 PDCL2Q8N4E4 241 aa15.47■□□□□ 0.07
NXF1-204ENST00000527064 TRIML1Q8N9V2 468 aa15.47■□□□□ 0.07
NXF1-204ENST00000527064 C2orf15Q8WU43 125 aaKnown RBP15.47■□□□□ 0.07
NXF1-204ENST00000527064 SYAP1Q96A49 352 aaPredicted RBP15.47■□□□□ 0.07
NXF1-204ENST00000527064 DHTKD1Q96HY7 919 aaPredicted RBP15.47■□□□□ 0.07
NXF1-204ENST00000527064 MKNK1Q9BUB5 465 aa15.47■□□□□ 0.07
NXF1-204ENST00000527064 ZCWPW1Q9H0M4 648 aa15.47■□□□□ 0.07
NXF1-204ENST00000527064 GZF1Q9H116 711 aaPredicted RBP15.47■□□□□ 0.07
NXF1-204ENST00000527064 CD320Q9NPF0 282 aa15.47■□□□□ 0.07
NXF1-204ENST00000527064 L1RE1Q9UN81 338 aa15.47■□□□□ 0.07
NXF1-204ENST00000527064 INSL5Q9Y5Q6 135 aa15.47■□□□□ 0.07
NXF1-204ENST00000527064 C2orf16Q68DN1 1984 aa15.46■□□□□ 0.07
NXF1-204ENST00000527064 SLC16A3O15427 465 aaKnown RBP15.46■□□□□ 0.07
NXF1-204ENST00000527064 AKAP3O75969 853 aa15.46■□□□□ 0.07
NXF1-204ENST00000527064 CLSTN1O94985 981 aa15.46■□□□□ 0.07
NXF1-204ENST00000527064 STAU1O95793 577 aaKnown RBP15.46■□□□□ 0.07
NXF1-204ENST00000527064 OR4Q2P0C623 313 aa15.46■□□□□ 0.07
NXF1-204ENST00000527064 SP100P23497 879 aaPredicted RBP15.46■□□□□ 0.07
NXF1-204ENST00000527064 LHX1P48742 406 aa15.46■□□□□ 0.07
NXF1-204ENST00000527064 VAMP7P51809 220 aa15.46■□□□□ 0.07
NXF1-204ENST00000527064 TNNC1P63316 161 aa15.46■□□□□ 0.07
NXF1-204ENST00000527064 MORC3Q14149 939 aa15.46■□□□□ 0.07
NXF1-204ENST00000527064 RNF19BQ6ZMZ0 732 aa15.46■□□□□ 0.07
NXF1-204ENST00000527064 ADGRF2Q8IZF7 708 aa15.46■□□□□ 0.07
NXF1-204ENST00000527064 OR10T2Q8NGX3 314 aa15.46■□□□□ 0.07
NXF1-204ENST00000527064 PLEKHO2Q8TD55 490 aa15.46■□□□□ 0.07
NXF1-204ENST00000527064 HSFX1Q9UBD0 423 aa15.46■□□□□ 0.07
NXF1-204ENST00000527064 POLIQ9UNA4 740 aa15.46■□□□□ 0.07
NXF1-204ENST00000527064 BICDL2A1A5D9 508 aa15.45■□□□□ 0.06
NXF1-204ENST00000527064 MTMR11A4FU01 709 aa15.45■□□□□ 0.06
NXF1-204ENST00000527064 C2CD4DB7Z1M9 353 aa15.45■□□□□ 0.06
NXF1-204ENST00000527064 ALADP13716 330 aa15.45■□□□□ 0.06
NXF1-204ENST00000527064 CCNE1P24864 410 aa15.45■□□□□ 0.06
NXF1-204ENST00000527064 PCSK1P29120 753 aa15.45■□□□□ 0.06
NXF1-204ENST00000527064 FKBP3Q00688 224 aaKnown RBP15.45■□□□□ 0.06
NXF1-204ENST00000527064 SLC39A12Q504Y0 691 aa15.45■□□□□ 0.06
NXF1-204ENST00000527064 TDRD10Q5VZ19 366 aaKnown RBP15.45■□□□□ 0.06
NXF1-204ENST00000527064 RNF135Q8IUD6 432 aa15.45■□□□□ 0.06
NXF1-204ENST00000527064 ZDHHC14Q8IZN3 488 aa15.45■□□□□ 0.06
NXF1-204ENST00000527064 ZNF516Q92618 1163 aa15.45■□□□□ 0.06
NXF1-204ENST00000527064 PGLYRP2Q96PD5 576 aa15.45■□□□□ 0.06
NXF1-204ENST00000527064 ACBD6Q9BR61 282 aa15.45■□□□□ 0.06
NXF1-204ENST00000527064 DDX43Q9NXZ2 648 aaKnown RBP15.45■□□□□ 0.06
NXF1-204ENST00000527064 KIAA1468Q9P260 1216 aa15.45■□□□□ 0.06
NXF1-204ENST00000527064 TTC28Q96AY4 2481 aa15.44■□□□□ 0.06
NXF1-204ENST00000527064 BIN1O00499 593 aa15.44■□□□□ 0.06
NXF1-204ENST00000527064 DCXO43602 365 aa15.44■□□□□ 0.06
NXF1-204ENST00000527064 STX10O60499 249 aa15.44■□□□□ 0.06
NXF1-204ENST00000527064 SEC24AO95486 1093 aa15.44■□□□□ 0.06
NXF1-204ENST00000527064 C4BPAP04003 597 aaKnown RBP15.44■□□□□ 0.06
NXF1-204ENST00000527064 P4HA1P13674 534 aa15.44■□□□□ 0.06
NXF1-204ENST00000527064 FSHRP23945 695 aa15.44■□□□□ 0.06
NXF1-204ENST00000527064 DLG4P78352 724 aa15.44■□□□□ 0.06
NXF1-204ENST00000527064 TWF1Q12792 350 aa15.44■□□□□ 0.06
NXF1-204ENST00000527064 NCOA4Q13772 614 aa15.44■□□□□ 0.06
NXF1-204ENST00000527064 CAMK4Q16566 473 aa15.44■□□□□ 0.06
NXF1-204ENST00000527064 NFE2Q16621 373 aaPredicted RBP15.44■□□□□ 0.06
NXF1-204ENST00000527064 SOWAHAQ2M3V2 549 aa15.44■□□□□ 0.06
NXF1-204ENST00000527064 ZNF699Q32M78 642 aa15.44■□□□□ 0.06
NXF1-204ENST00000527064 WDR72Q3MJ13 1102 aa15.44■□□□□ 0.06
NXF1-204ENST00000527064 ZACNQ401N2 412 aa15.44■□□□□ 0.06
NXF1-204ENST00000527064 PABPC1LQ4VXU2 614 aaKnown RBP15.44■□□□□ 0.06
NXF1-204ENST00000527064 ANKRD40Q6AI12 368 aa15.44■□□□□ 0.06
NXF1-204ENST00000527064 ISM2Q6H9L7 571 aa15.44■□□□□ 0.06
NXF1-204ENST00000527064 IQCEQ6IPM2 695 aa15.44■□□□□ 0.06
NXF1-204ENST00000527064 FOXR2Q6PJQ5 311 aa15.44■□□□□ 0.06
NXF1-204ENST00000527064 GET4Q7L5D6 327 aaPredicted RBP15.44■□□□□ 0.06
NXF1-204ENST00000527064 LIMS2Q7Z4I7 341 aa15.44■□□□□ 0.06
NXF1-204ENST00000527064 GRASPQ7Z6J2 395 aaPredicted RBP15.44■□□□□ 0.06
NXF1-204ENST00000527064 ZC3H3Q8IXZ2 948 aaKnown RBP15.44■□□□□ 0.06
NXF1-204ENST00000527064 FEZF2Q8TBJ5 459 aa15.44■□□□□ 0.06
NXF1-204ENST00000527064 SPPL2BQ8TCT7 592 aa15.44■□□□□ 0.06
NXF1-204ENST00000527064 TMEM209Q96SK2 561 aa15.44■□□□□ 0.06
NXF1-204ENST00000527064 MMS19Q96T76 1030 aa15.44■□□□□ 0.06
NXF1-204ENST00000527064 RTP3Q9BQQ7 232 aa15.44■□□□□ 0.06
NXF1-204ENST00000527064 IMPG2Q9BZV3 1241 aa15.44■□□□□ 0.06
NXF1-204ENST00000527064 CLSTN2Q9H4D0 955 aa15.44■□□□□ 0.06
NXF1-204ENST00000527064 VRTNQ9H8Y1 702 aa15.44■□□□□ 0.06
NXF1-204ENST00000527064 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP15.44■□□□□ 0.06
NXF1-204ENST00000527064 YIPF1Q9Y548 306 aa15.44■□□□□ 0.06
NXF1-204ENST00000527064 GABRDO14764 452 aa15.43■□□□□ 0.06
NXF1-204ENST00000527064 CST3P01034 146 aaPredicted RBP15.43■□□□□ 0.06
NXF1-204ENST00000527064 FAM163BP0C2L3 166 aa15.43■□□□□ 0.06
NXF1-204ENST00000527064 PTPN2P17706 415 aa15.43■□□□□ 0.06
NXF1-204ENST00000527064 WARSP23381 471 aaKnown RBP15.43■□□□□ 0.06
NXF1-204ENST00000527064 GBP2P32456 591 aaPredicted RBP15.43■□□□□ 0.06
NXF1-204ENST00000527064 GTF2H1P32780 548 aa15.43■□□□□ 0.06
NXF1-204ENST00000527064 PIK3CAP42336 1068 aa15.43■□□□□ 0.06
NXF1-204ENST00000527064 ALDH1A3P47895 512 aa15.43■□□□□ 0.06
NXF1-204ENST00000527064 TUFMP49411 452 aaKnown RBP15.43■□□□□ 0.06
NXF1-204ENST00000527064 EPHB3P54753 998 aa15.43■□□□□ 0.06
NXF1-204ENST00000527064 MYL6P60660 151 aa15.43■□□□□ 0.06
NXF1-204ENST00000527064 DUSP4Q13115 394 aa15.43■□□□□ 0.06
NXF1-204ENST00000527064 INTS6LQ5JSJ4 861 aaKnown RBP15.43■□□□□ 0.06
NXF1-204ENST00000527064 SCARA3Q6AZY7 606 aa15.43■□□□□ 0.06
NXF1-204ENST00000527064 LEMD2Q8NC56 503 aa15.43■□□□□ 0.06
NXF1-204ENST00000527064 TAF4BQ92750 862 aa15.43■□□□□ 0.06
NXF1-204ENST00000527064 ZNF512Q96ME7 567 aaPredicted RBP15.43■□□□□ 0.06
NXF1-204ENST00000527064 CEP63Q96MT8 703 aa15.43■□□□□ 0.06
NXF1-204ENST00000527064 XYLT2Q9H1B5 865 aa15.43■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 21.3 ms