RNA–Protein interactions for RNA: ENST00000525878.5

CSDE1-210, Transcript of cold shock domain containing E1, humanhuman

TSL 4

Gene CSDE1, Length 626 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSDE1-210ENST00000525878 GADL1Q6ZQY3 521 aa5.48□□□□□ -1.53
CSDE1-210ENST00000525878 NECAB2Q7Z6G3 386 aa5.48□□□□□ -1.53
CSDE1-210ENST00000525878 FBXO41Q8TF61 875 aa5.48□□□□□ -1.53
CSDE1-210ENST00000525878 FAXDC2Q96IV6 333 aa5.48□□□□□ -1.53
CSDE1-210ENST00000525878 TMX1Q9H3N1 280 aa5.48□□□□□ -1.53
CSDE1-210ENST00000525878 SERTAD4Q9NUC0 356 aa5.48□□□□□ -1.53
CSDE1-210ENST00000525878 RLIMQ9NVW2 624 aa5.48□□□□□ -1.53
CSDE1-210ENST00000525878 MKS1Q9NXB0 559 aa5.48□□□□□ -1.53
CSDE1-210ENST00000525878 SLC5A4Q9NY91 659 aa5.48□□□□□ -1.53
CSDE1-210ENST00000525878 FZD9O00144 591 aa5.47□□□□□ -1.53
CSDE1-210ENST00000525878 POLRMTO00411 1230 aaKnown RBP5.47□□□□□ -1.53
CSDE1-210ENST00000525878 TRIAP1O43715 76 aa5.47□□□□□ -1.53
CSDE1-210ENST00000525878 NR2F6P10588 404 aa5.47□□□□□ -1.53
CSDE1-210ENST00000525878 MALP21145 153 aa5.47□□□□□ -1.53
CSDE1-210ENST00000525878 CYP2C19P33261 490 aa5.47□□□□□ -1.53
CSDE1-210ENST00000525878 NDUFV1P49821 464 aa5.47□□□□□ -1.53
CSDE1-210ENST00000525878 GRM1Q13255 1194 aa5.47□□□□□ -1.53
CSDE1-210ENST00000525878 CCDC93Q567U6 631 aa5.47□□□□□ -1.53
CSDE1-210ENST00000525878 SUMO4Q6EEV6 95 aa5.47□□□□□ -1.53
CSDE1-210ENST00000525878 PPP4R3AQ6IN85 833 aa5.47□□□□□ -1.53
CSDE1-210ENST00000525878 FAM109AQ8N4B1 249 aa5.47□□□□□ -1.53
CSDE1-210ENST00000525878 KAT5Q92993 513 aa5.47□□□□□ -1.53
CSDE1-210ENST00000525878 SEMA4CQ9C0C4 833 aa5.47□□□□□ -1.53
CSDE1-210ENST00000525878 EHD3Q9NZN3 535 aa5.47□□□□□ -1.53
CSDE1-210ENST00000525878 KLHL33A6NCF5 533 aa5.46□□□□□ -1.54
CSDE1-210ENST00000525878 TARM1B6A8C7 271 aa5.46□□□□□ -1.54
CSDE1-210ENST00000525878 F5H697 171 aa5.46□□□□□ -1.54
CSDE1-210ENST00000525878 TP73O15350 636 aa5.46□□□□□ -1.54
CSDE1-210ENST00000525878 PRR35P0CG20 571 aa5.46□□□□□ -1.54
CSDE1-210ENST00000525878 CTGFP29279 349 aa5.46□□□□□ -1.54
CSDE1-210ENST00000525878 CCT8P50990 548 aa5.46□□□□□ -1.54
CSDE1-210ENST00000525878 FXR1P51114 621 aaKnown RBP eCLIP5.46□□□□□ -1.54
CSDE1-210ENST00000525878 DSC2Q02487 901 aa5.46□□□□□ -1.54
CSDE1-210ENST00000525878 SNAPC2Q13487 334 aa5.46□□□□□ -1.54
CSDE1-210ENST00000525878 HABP2Q14520 560 aaPredicted RBP5.46□□□□□ -1.54
CSDE1-210ENST00000525878 MTX3Q5HYI7 312 aa5.46□□□□□ -1.54
CSDE1-210ENST00000525878 ZNF626Q68DY1 528 aa5.46□□□□□ -1.54
CSDE1-210ENST00000525878 DDX42Q86XP3 938 aaKnown RBP eCLIP5.46□□□□□ -1.54
CSDE1-210ENST00000525878 CAMKK1Q8N5S9 505 aa5.46□□□□□ -1.54
CSDE1-210ENST00000525878 FKBP10Q96AY3 582 aa5.46□□□□□ -1.54
CSDE1-210ENST00000525878 SMOC2Q9H3U7 446 aa5.46□□□□□ -1.54
CSDE1-210ENST00000525878 GPR35Q9HC97 309 aa5.46□□□□□ -1.54
CSDE1-210ENST00000525878 DKK3Q9UBP4 350 aa5.46□□□□□ -1.54
CSDE1-210ENST00000525878 MCM8Q9UJA3 840 aa5.46□□□□□ -1.54
CSDE1-210ENST00000525878 BTBD3Q9Y2F9 522 aa5.46□□□□□ -1.54
CSDE1-210ENST00000525878 CHEK2O96017 543 aa5.45□□□□□ -1.54
CSDE1-210ENST00000525878 HNRNPCP07910 306 aaKnown RBP eCLIP5.45□□□□□ -1.543e-6■■■□□ 18.5
CSDE1-210ENST00000525878 JUPP14923 745 aa5.45□□□□□ -1.54
CSDE1-210ENST00000525878 ZFXP17010 805 aaPredicted RBP5.45□□□□□ -1.54
CSDE1-210ENST00000525878 TOB1P50616 345 aaPredicted RBP5.45□□□□□ -1.54
CSDE1-210ENST00000525878 BMPR2Q13873 1038 aa5.45□□□□□ -1.54
CSDE1-210ENST00000525878 ACAP2Q15057 778 aa5.45□□□□□ -1.54
CSDE1-210ENST00000525878 KHDC1Q4VXA5 237 aaKnown RBP5.45□□□□□ -1.54
CSDE1-210ENST00000525878 SLC44A4Q53GD3 710 aa5.45□□□□□ -1.54
CSDE1-210ENST00000525878 TAF2Q6P1X5 1199 aa5.45□□□□□ -1.54
CSDE1-210ENST00000525878 SLC30A10Q6XR72 485 aa5.45□□□□□ -1.54
CSDE1-210ENST00000525878 ZNF66Q6ZN08 573 aa5.45□□□□□ -1.54
CSDE1-210ENST00000525878 TTC7BQ86TV6 843 aa5.45□□□□□ -1.54
CSDE1-210ENST00000525878 PSD4Q8NDX1 1056 aa5.45□□□□□ -1.54
CSDE1-210ENST00000525878 REPS1Q96D71 796 aa5.45□□□□□ -1.54
CSDE1-210ENST00000525878 VRK1Q99986 396 aaPredicted RBP5.45□□□□□ -1.54
CSDE1-210ENST00000525878 KRTAP1-5Q9BYS1 174 aa5.45□□□□□ -1.54
CSDE1-210ENST00000525878 TPSD1Q9BZJ3 242 aa5.45□□□□□ -1.54
CSDE1-210ENST00000525878 BRD9Q9H8M2 597 aa5.45□□□□□ -1.54
CSDE1-210ENST00000525878 MAN1C1Q9NR34 630 aa5.45□□□□□ -1.54
CSDE1-210ENST00000525878 MRPS18AQ9NVS2 196 aaKnown RBP5.45□□□□□ -1.54
CSDE1-210ENST00000525878 SERPINB13Q9UIV8 391 aa5.45□□□□□ -1.54
CSDE1-210ENST00000525878 NR2E3Q9Y5X4 410 aa5.45□□□□□ -1.54
CSDE1-210ENST00000525878 CFAP20Q9Y6A4 193 aaKnown RBP5.45□□□□□ -1.54
CSDE1-210ENST00000525878 KCNAB3O43448 404 aa5.44□□□□□ -1.54
CSDE1-210ENST00000525878 SOAT2O75908 522 aa5.44□□□□□ -1.54
CSDE1-210ENST00000525878 CLSTN1O94985 981 aa5.44□□□□□ -1.54
CSDE1-210ENST00000525878 MT-CO1P00395 513 aa5.44□□□□□ -1.54
CSDE1-210ENST00000525878 GJB1P08034 283 aa5.44□□□□□ -1.54
CSDE1-210ENST00000525878 PROSER3Q2NL68 480 aa5.44□□□□□ -1.54
CSDE1-210ENST00000525878 PLAC9Q5JTB6 97 aa5.44□□□□□ -1.54
CSDE1-210ENST00000525878 SLC4A10Q6U841 1118 aa5.44□□□□□ -1.54
CSDE1-210ENST00000525878 ZNF551Q7Z340 670 aaPredicted RBP5.44□□□□□ -1.54
CSDE1-210ENST00000525878 TEKT5Q96M29 485 aa5.44□□□□□ -1.54
CSDE1-210ENST00000525878 ACTRT3Q9BYD9 372 aa5.44□□□□□ -1.54
CSDE1-210ENST00000525878 ZNF213O14771 459 aa5.43□□□□□ -1.54
CSDE1-210ENST00000525878 RPLP2P05387 115 aaKnown RBP5.43□□□□□ -1.54
CSDE1-210ENST00000525878 EBLN1P0CF75 366 aa5.43□□□□□ -1.54
CSDE1-210ENST00000525878 KELP23276 732 aa5.43□□□□□ -1.54
CSDE1-210ENST00000525878 KIF23Q02241 960 aaPredicted RBP5.43□□□□□ -1.54
CSDE1-210ENST00000525878 RBM20Q5T481 1227 aaKnown RBP5.43□□□□□ -1.54
CSDE1-210ENST00000525878 SYDE2Q5VT97 1194 aa5.43□□□□□ -1.54
CSDE1-210ENST00000525878 CEP85Q6P2H3 762 aa5.43□□□□□ -1.54
CSDE1-210ENST00000525878 PPP1R32Q7Z5V6 425 aa5.43□□□□□ -1.54
CSDE1-210ENST00000525878 NEK8Q86SG6 692 aa5.43□□□□□ -1.54
CSDE1-210ENST00000525878 CNPPD1Q9BV87 410 aa5.43□□□□□ -1.54
CSDE1-210ENST00000525878 CFAP97Q9P2B7 532 aa5.43□□□□□ -1.54
CSDE1-210ENST00000525878 AGAP1Q9UPQ3 857 aa5.43□□□□□ -1.54
CSDE1-210ENST00000525878 ZNF785A8K8V0 405 aa5.42□□□□□ -1.54
CSDE1-210ENST00000525878 NHLRC4P0CG21 123 aaPredicted RBP5.42□□□□□ -1.54
CSDE1-210ENST00000525878 PTGER1P34995 402 aa5.42□□□□□ -1.54
CSDE1-210ENST00000525878 PSMC1P62191 440 aaKnown RBP5.42□□□□□ -1.54
CSDE1-210ENST00000525878 KLF9Q13886 244 aaPredicted RBP5.42□□□□□ -1.54
CSDE1-210ENST00000525878 KIF22Q14807 665 aa5.42□□□□□ -1.54
CSDE1-210ENST00000525878 TBCCQ15814 346 aa5.42□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 75.4 ms