RNA–Protein interactions for RNA: ENST00000524356.1

PCM1-223, Transcript of pericentriolar material 1, human

TSL 2

Gene PCM1, Length 577 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PCM1-223	ENST00000524356		K7ESF4	209 aa		5.14	□□□□□ -1.59
PCM1-223	ENST00000524356	NRP1	O14786	923 aa		5.14	□□□□□ -1.59
PCM1-223	ENST00000524356	ERC2	O15083	957 aa		5.14	□□□□□ -1.59
PCM1-223	ENST00000524356	SNUPN	O95149	360 aa	Known RBP	5.14	□□□□□ -1.59
PCM1-223	ENST00000524356	COPB2	P35606	906 aa		5.14	□□□□□ -1.59
PCM1-223	ENST00000524356	IGFALS	P35858	605 aa		5.14	□□□□□ -1.59
PCM1-223	ENST00000524356	FNTB	P49356	437 aa		5.14	□□□□□ -1.59
PCM1-223	ENST00000524356	GABRE	P78334	506 aa		5.14	□□□□□ -1.59
PCM1-223	ENST00000524356	GPSM2	P81274	684 aa		5.14	□□□□□ -1.59
PCM1-223	ENST00000524356	PCBP2	Q15366	365 aa	Known RBP eCLIP	5.14	□□□□□ -1.59
PCM1-223	ENST00000524356	ARHGAP29	Q52LW3	1261 aa		5.14	□□□□□ -1.59
PCM1-223	ENST00000524356	LVRN	Q6Q4G3	990 aa		5.14	□□□□□ -1.59
PCM1-223	ENST00000524356	SRL	Q86TD4	932 aa		5.14	□□□□□ -1.59
PCM1-223	ENST00000524356	DRC7	Q8IY82	874 aa		5.14	□□□□□ -1.59
PCM1-223	ENST00000524356	NGDN	Q8NEJ9	315 aa	Known RBP	5.14	□□□□□ -1.59
PCM1-223	ENST00000524356	OR5M3	Q8NGP4	307 aa		5.14	□□□□□ -1.59
PCM1-223	ENST00000524356	LRRC59	Q96AG4	307 aa	Known RBP	5.14	□□□□□ -1.59
PCM1-223	ENST00000524356	SCLT1	Q96NL6	688 aa		5.14	□□□□□ -1.59
PCM1-223	ENST00000524356	GPR101	Q96P66	508 aa	Predicted RBP	5.14	□□□□□ -1.59
PCM1-223	ENST00000524356	ORAI2	Q96SN7	254 aa		5.14	□□□□□ -1.59
PCM1-223	ENST00000524356	SOX7	Q9BT81	388 aa		5.14	□□□□□ -1.59
PCM1-223	ENST00000524356	SLC12A5	Q9H2X9	1139 aa		5.14	□□□□□ -1.59
PCM1-223	ENST00000524356	VTA1	Q9NP79	307 aa		5.14	□□□□□ -1.59
PCM1-223	ENST00000524356	FOXJ2	Q9P0K8	574 aa		5.14	□□□□□ -1.59
PCM1-223	ENST00000524356	HDAC5	Q9UQL6	1122 aa		5.14	□□□□□ -1.59
PCM1-223	ENST00000524356	DMTF1	Q9Y222	760 aa		5.14	□□□□□ -1.59
PCM1-223	ENST00000524356	PCDHGB3	Q9Y5G1	929 aa		5.14	□□□□□ -1.59
PCM1-223	ENST00000524356	DGKB	Q9Y6T7	804 aa		5.14	□□□□□ -1.59
PCM1-223	ENST00000524356	MROH1	Q8NDA8	1641 aa		5.14	□□□□□ -1.59
PCM1-223	ENST00000524356	ADGB	Q8N7X0	1667 aa		5.14	□□□□□ -1.59
PCM1-223	ENST00000524356	PNPLA6	Q8IY17	1366 aa		5.14	□□□□□ -1.59
PCM1-223	ENST00000524356	PTPRU	Q92729	1446 aa		5.14	□□□□□ -1.59
PCM1-223	ENST00000524356	DIP2A	Q14689	1571 aa		5.13	□□□□□ -1.59
PCM1-223	ENST00000524356	ABHD14A-ACY1	A0A1B0GW23	586 aa		5.13	□□□□□ -1.59
PCM1-223	ENST00000524356	LOC101059915	A0A1B0GWI6	518 aa	Predicted RBP	5.13	□□□□□ -1.59
PCM1-223	ENST00000524356	UBA6	A0AVT1	1052 aa	Predicted RBP	5.13	□□□□□ -1.59
PCM1-223	ENST00000524356		A6NNZ2	444 aa		5.13	□□□□□ -1.59
PCM1-223	ENST00000524356	ZNF891	A8MT65	544 aa	Predicted RBP	5.13	□□□□□ -1.59
PCM1-223	ENST00000524356	ZEB2	O60315	1214 aa		5.13	□□□□□ -1.59
PCM1-223	ENST00000524356	ADCYAP1R1	P41586	468 aa		5.13	□□□□□ -1.59
PCM1-223	ENST00000524356	CASP2	P42575	452 aa		5.13	□□□□□ -1.59
PCM1-223	ENST00000524356	RENBP	P51606	427 aa		5.13	□□□□□ -1.59
PCM1-223	ENST00000524356	WNT3A	P56704	352 aa		5.13	□□□□□ -1.59
PCM1-223	ENST00000524356	REST	Q13127	1097 aa		5.13	□□□□□ -1.59
PCM1-223	ENST00000524356	MYBPC3	Q14896	1274 aa		5.13	□□□□□ -1.59
PCM1-223	ENST00000524356	ODF1	Q14990	250 aa		5.13	□□□□□ -1.59
PCM1-223	ENST00000524356	TUBB8	Q3ZCM7	444 aa		5.13	□□□□□ -1.59
PCM1-223	ENST00000524356	ZNF788	Q6ZQV5	615 aa		5.13	□□□□□ -1.59
PCM1-223	ENST00000524356	MMS22L	Q6ZRQ5	1243 aa		5.13	□□□□□ -1.59
PCM1-223	ENST00000524356	SUGP1	Q8IWZ8	645 aa	Known RBP	5.13	□□□□□ -1.59
PCM1-223	ENST00000524356	NKAP	Q8N5F7	415 aa	Known RBP	5.13	□□□□□ -1.59
PCM1-223	ENST00000524356	PPHLN1	Q8NEY8	458 aa	Known RBP	5.13	□□□□□ -1.59
PCM1-223	ENST00000524356	OR2W6P	Q8NHA6	318 aa		5.13	□□□□□ -1.59
PCM1-223	ENST00000524356	POF1B	Q8WVV4	589 aa		5.13	□□□□□ -1.59
PCM1-223	ENST00000524356	TTC17	Q96AE7	1141 aa		5.13	□□□□□ -1.59
PCM1-223	ENST00000524356	MPP4	Q96JB8	637 aa		5.13	□□□□□ -1.59
PCM1-223	ENST00000524356	UIMC1	Q96RL1	719 aa		5.13	□□□□□ -1.59
PCM1-223	ENST00000524356	OSBPL6	Q9BZF3	934 aa		5.13	□□□□□ -1.59
PCM1-223	ENST00000524356	NLRC4	Q9NPP4	1024 aa		5.13	□□□□□ -1.59
PCM1-223	ENST00000524356	FNIP2	Q9P278	1114 aa		5.13	□□□□□ -1.59
PCM1-223	ENST00000524356	SAP30BP	Q9UHR5	308 aa	Known RBP	5.13	□□□□□ -1.59
PCM1-223	ENST00000524356	ANKRD6	Q9Y2G4	727 aa		5.13	□□□□□ -1.59
PCM1-223	ENST00000524356	TIAM1	Q13009	1591 aa		5.12	□□□□□ -1.59
PCM1-223	ENST00000524356		F5H423	210 aa	Predicted RBP	5.12	□□□□□ -1.59
PCM1-223	ENST00000524356	HLA-DOA	P06340	250 aa		5.12	□□□□□ -1.59
PCM1-223	ENST00000524356	GAA	P10253	952 aa		5.12	□□□□□ -1.59
PCM1-223	ENST00000524356	FDXR	P22570	491 aa		5.12	□□□□□ -1.59
PCM1-223	ENST00000524356	CYP2C19	P33261	490 aa		5.12	□□□□□ -1.59
PCM1-223	ENST00000524356	BIRC3	Q13489	604 aa		5.12	□□□□□ -1.59
PCM1-223	ENST00000524356	LONRF1	Q17RB8	773 aa		5.12	□□□□□ -1.59
PCM1-223	ENST00000524356	CFAP100	Q494V2	611 aa		5.12	□□□□□ -1.59
PCM1-223	ENST00000524356	CCDC93	Q567U6	631 aa		5.12	□□□□□ -1.59
PCM1-223	ENST00000524356	TTC38	Q5R3I4	469 aa		5.12	□□□□□ -1.59
PCM1-223	ENST00000524356	PRAMEF9	Q5VWM5	478 aa		5.12	□□□□□ -1.59
PCM1-223	ENST00000524356	CDCA2	Q69YH5	1023 aa	Predicted RBP	5.12	□□□□□ -1.59
PCM1-223	ENST00000524356	ZNF354C	Q86Y25	554 aa		5.12	□□□□□ -1.59
PCM1-223	ENST00000524356	CLASRP	Q8N2M8	674 aa	Known RBP	5.12	□□□□□ -1.59
PCM1-223	ENST00000524356	PDPR	Q8NCN5	879 aa		5.12	□□□□□ -1.59
PCM1-223	ENST00000524356	PIK3C3	Q8NEB9	887 aa		5.12	□□□□□ -1.59
PCM1-223	ENST00000524356	SKA1	Q96BD8	255 aa		5.12	□□□□□ -1.59
PCM1-223	ENST00000524356		Q96MF0	132 aa		5.12	□□□□□ -1.59
PCM1-223	ENST00000524356	AIFM3	Q96NN9	605 aa		5.12	□□□□□ -1.59
PCM1-223	ENST00000524356	NAA15	Q9BXJ9	866 aa	Known RBP	5.12	□□□□□ -1.59
PCM1-223	ENST00000524356	ADGRE3	Q9BY15	652 aa		5.12	□□□□□ -1.59
PCM1-223	ENST00000524356	PITHD1	Q9GZP4	211 aa	Predicted RBP	5.12	□□□□□ -1.59
PCM1-223	ENST00000524356	MAN1C1	Q9NR34	630 aa		5.12	□□□□□ -1.59
PCM1-223	ENST00000524356	RNF181	Q9P0P0	153 aa		5.12	□□□□□ -1.59
PCM1-223	ENST00000524356	TRPC5	Q9UL62	973 aa	Predicted RBP	5.12	□□□□□ -1.59
PCM1-223	ENST00000524356	CNTNAP2	Q9UHC6	1331 aa		5.12	□□□□□ -1.59
PCM1-223	ENST00000524356	ARHGAP31	Q2M1Z3	1444 aa		5.12	□□□□□ -1.59
PCM1-223	ENST00000524356	ADAMTS13	Q76LX8	1427 aa		5.12	□□□□□ -1.59
PCM1-223	ENST00000524356	SETD5	Q9C0A6	1442 aa		5.12	□□□□□ -1.59
PCM1-223	ENST00000524356	CCDC141	Q6ZP82	1450 aa		5.12	□□□□□ -1.59
PCM1-223	ENST00000524356	PIK3C2B	O00750	1634 aa		5.12	□□□□□ -1.59
PCM1-223	ENST00000524356	TCRBV16S1A1N1	A0A5B0	115 aa		5.11	□□□□□ -1.59
PCM1-223	ENST00000524356	CYSRT1	A8MQ03	144 aa		5.11	□□□□□ -1.59
PCM1-223	ENST00000524356	TCERG1	O14776	1098 aa	Known RBP	5.11	□□□□□ -1.59
PCM1-223	ENST00000524356	ALDH1A2	O94788	518 aa		5.11	□□□□□ -1.59
PCM1-223	ENST00000524356	AGR2	O95994	175 aa		5.11	□□□□□ -1.59
PCM1-223	ENST00000524356	SLC5A1	P13866	664 aa		5.11	□□□□□ -1.59

Retrieved 100 of 20,778 RNA–protein pairs in 18.8 ms