RNA–Protein interactions for RNA: ENST00000522900.5

SPIDR-220, Transcript of scaffold protein involved in DNA repair, humanhuman

TSL 3

Gene SPIDR, Length 692 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPIDR-220ENST00000522900 CSGALNACT2Q8N6G5 542 aa20.16■□□□□ 0.82
SPIDR-220ENST00000522900 CACTINQ8WUQ7 758 aaKnown RBP20.16■□□□□ 0.82
SPIDR-220ENST00000522900 SCFD1Q8WVM8 642 aa20.16■□□□□ 0.82
SPIDR-220ENST00000522900 TBC1D17Q9HA65 648 aa20.16■□□□□ 0.82
SPIDR-220ENST00000522900 SLC39A2Q9NP94 309 aa20.16■□□□□ 0.82
SPIDR-220ENST00000522900 HSPBP1Q9NZL4 362 aa20.16■□□□□ 0.82
SPIDR-220ENST00000522900 SIX4Q9UIU6 781 aa20.16■□□□□ 0.82
SPIDR-220ENST00000522900 PTPRJQ12913 1337 aa20.16■□□□□ 0.82
SPIDR-220ENST00000522900 MICAL2O94851 1124 aa20.15■□□□□ 0.82
SPIDR-220ENST00000522900 FCARP24071 287 aa20.15■□□□□ 0.82
SPIDR-220ENST00000522900 NUBP1P53384 320 aa20.15■□□□□ 0.82
SPIDR-220ENST00000522900 SNW1Q13573 536 aaKnown RBP20.15■□□□□ 0.82
SPIDR-220ENST00000522900 RDH13Q8NBN7 331 aa20.15■□□□□ 0.82
SPIDR-220ENST00000522900 OR5B17Q8NGF7 314 aa20.15■□□□□ 0.82
SPIDR-220ENST00000522900 LEO1Q8WVC0 666 aaPredicted RBP20.15■□□□□ 0.82
SPIDR-220ENST00000522900 MTMR12Q9C0I1 747 aa20.15■□□□□ 0.82
SPIDR-220ENST00000522900 ASAH2Q9NR71 780 aa20.15■□□□□ 0.82
SPIDR-220ENST00000522900 ARHGEF3Q9NR81 526 aa20.15■□□□□ 0.82
SPIDR-220ENST00000522900 AGPAT3Q9NRZ7 376 aa20.15■□□□□ 0.82
SPIDR-220ENST00000522900 SCN1AP35498 2009 aa20.14■□□□□ 0.81
SPIDR-220ENST00000522900 A0A1B0GVL5 298 aa20.14■□□□□ 0.81
SPIDR-220ENST00000522900 PVALEFA0A1B0GWK0 134 aa20.14■□□□□ 0.81
SPIDR-220ENST00000522900 ZNF233A6NK53 670 aa20.14■□□□□ 0.81
SPIDR-220ENST00000522900 KIAA0391O15091 583 aaKnown RBP20.14■□□□□ 0.81
SPIDR-220ENST00000522900 CLIC2O15247 247 aa20.14■□□□□ 0.81
SPIDR-220ENST00000522900 ACTN4O43707 911 aaKnown RBP20.14■□□□□ 0.81
SPIDR-220ENST00000522900 KLRC4O43908 158 aa20.14■□□□□ 0.81
SPIDR-220ENST00000522900 ECI2O75521 394 aa20.14■□□□□ 0.81
SPIDR-220ENST00000522900 SLFN14P0C7P3 912 aa20.14■□□□□ 0.81
SPIDR-220ENST00000522900 PNPLA4P41247 253 aa20.14■□□□□ 0.81
SPIDR-220ENST00000522900 ALDH1A3P47895 512 aa20.14■□□□□ 0.81
SPIDR-220ENST00000522900 MRE11P49959 708 aa20.14■□□□□ 0.81
SPIDR-220ENST00000522900 EPHB3P54753 998 aa20.14■□□□□ 0.81
SPIDR-220ENST00000522900 TEAD2Q15562 447 aa20.14■□□□□ 0.81
SPIDR-220ENST00000522900 TMC8Q8IU68 726 aa20.14■□□□□ 0.81
SPIDR-220ENST00000522900 THEM5Q8N1Q8 247 aa20.14■□□□□ 0.81
SPIDR-220ENST00000522900 PDCL2Q8N4E4 241 aa20.14■□□□□ 0.81
SPIDR-220ENST00000522900 SHKBP1Q8TBC3 707 aa20.14■□□□□ 0.81
SPIDR-220ENST00000522900 ATOH1Q92858 354 aaPredicted RBP20.14■□□□□ 0.81
SPIDR-220ENST00000522900 PAGE5Q96GU1 130 aa20.14■□□□□ 0.81
SPIDR-220ENST00000522900 ZNF560Q96MR9 790 aa20.14■□□□□ 0.81
SPIDR-220ENST00000522900 TMLHEQ9NVH6 421 aa20.14■□□□□ 0.81
SPIDR-220ENST00000522900 KRT19P08727 400 aa20.13■□□□□ 0.81
SPIDR-220ENST00000522900 TMEM191BP0C7N4 346 aa20.13■□□□□ 0.81
SPIDR-220ENST00000522900 PFKFB1P16118 471 aa20.13■□□□□ 0.81
SPIDR-220ENST00000522900 CMA1P23946 247 aa20.13■□□□□ 0.81
SPIDR-220ENST00000522900 RBP5P82980 135 aa20.13■□□□□ 0.81
SPIDR-220ENST00000522900 BFSP1Q12934 665 aa20.13■□□□□ 0.81
SPIDR-220ENST00000522900 SLC44A4Q53GD3 710 aa20.13■□□□□ 0.81
SPIDR-220ENST00000522900 PHLDB3Q6NSJ2 640 aa20.13■□□□□ 0.81
SPIDR-220ENST00000522900 DNAJB7Q7Z6W7 309 aaPredicted RBP20.13■□□□□ 0.81
SPIDR-220ENST00000522900 CEP57L1Q8IYX8 460 aa20.13■□□□□ 0.81
SPIDR-220ENST00000522900 ELSPBP1Q96BH3 223 aa20.13■□□□□ 0.81
SPIDR-220ENST00000522900 SPATA32Q96LK8 384 aa20.13■□□□□ 0.81
SPIDR-220ENST00000522900 ASB16Q96NS5 453 aa20.13■□□□□ 0.81
SPIDR-220ENST00000522900 SEPT5Q99719 369 aaPredicted RBP20.13■□□□□ 0.81
SPIDR-220ENST00000522900 ZNF334Q9HCZ1 680 aaPredicted RBP20.13■□□□□ 0.81
SPIDR-220ENST00000522900 INTS13Q9NVM9 706 aa20.13■□□□□ 0.81
SPIDR-220ENST00000522900 ITGA11Q9UKX5 1188 aa20.13■□□□□ 0.81
SPIDR-220ENST00000522900 L1RE1Q9UN81 338 aa20.13■□□□□ 0.81
SPIDR-220ENST00000522900 A0A1W2PRU2 124 aa20.12■□□□□ 0.81
SPIDR-220ENST00000522900 DCNP07585 359 aaKnown RBP20.12■□□□□ 0.81
SPIDR-220ENST00000522900 VIPR2P41587 438 aa20.12■□□□□ 0.81
SPIDR-220ENST00000522900 STARD6P59095 220 aa20.12■□□□□ 0.81
SPIDR-220ENST00000522900 PLD1Q13393 1074 aa20.12■□□□□ 0.81
SPIDR-220ENST00000522900 MGAT5BQ3V5L5 792 aa20.12■□□□□ 0.81
SPIDR-220ENST00000522900 GPIHBP1Q8IV16 184 aa20.12■□□□□ 0.81
SPIDR-220ENST00000522900 CCDC105Q8IYK2 499 aa20.12■□□□□ 0.81
SPIDR-220ENST00000522900 LRRC52Q8N7C0 313 aa20.12■□□□□ 0.81
SPIDR-220ENST00000522900 DTWD2Q8NBA8 298 aa20.12■□□□□ 0.81
SPIDR-220ENST00000522900 LEMD2Q8NC56 503 aa20.12■□□□□ 0.81
SPIDR-220ENST00000522900 LPIN3Q9BQK8 851 aa20.12■□□□□ 0.81
SPIDR-220ENST00000522900 FOXQ1Q9C009 403 aa20.12■□□□□ 0.81
SPIDR-220ENST00000522900 ZFP14Q9HCL3 533 aa20.12■□□□□ 0.81
SPIDR-220ENST00000522900 HPSEQ9Y251 543 aa20.12■□□□□ 0.81
SPIDR-220ENST00000522900 COL4A3Q01955 1670 aa20.11■□□□□ 0.81
SPIDR-220ENST00000522900 HCRTO43612 131 aa20.11■□□□□ 0.81
SPIDR-220ENST00000522900 LRRN2O75325 713 aa20.11■□□□□ 0.81
SPIDR-220ENST00000522900 ATF6P18850 670 aa20.11■□□□□ 0.81
SPIDR-220ENST00000522900 RFX1P22670 979 aa20.11■□□□□ 0.81
SPIDR-220ENST00000522900 CYP2J2P51589 502 aa20.11■□□□□ 0.81
SPIDR-220ENST00000522900 KRT85P78386 507 aa20.11■□□□□ 0.81
SPIDR-220ENST00000522900 GRM2Q14416 872 aa20.11■□□□□ 0.81
SPIDR-220ENST00000522900 SNRNP35Q16560 246 aaKnown RBP20.11■□□□□ 0.81
SPIDR-220ENST00000522900 BMT2Q1RMZ1 405 aa20.11■□□□□ 0.81
SPIDR-220ENST00000522900 STXBP5Q5T5C0 1151 aa20.11■□□□□ 0.81
SPIDR-220ENST00000522900 GAREM2Q75VX8 874 aa20.11■□□□□ 0.81
SPIDR-220ENST00000522900 OSTM1Q86WC4 334 aa20.11■□□□□ 0.81
SPIDR-220ENST00000522900 ZSCAN18Q8TBC5 510 aaPredicted RBP20.11■□□□□ 0.81
SPIDR-220ENST00000522900 GIPC2Q8TF65 315 aa20.11■□□□□ 0.81
SPIDR-220ENST00000522900 PSMG2Q969U7 264 aa20.11■□□□□ 0.81
SPIDR-220ENST00000522900 ANKRD36BP1Q96IX9 119 aa20.11■□□□□ 0.81
SPIDR-220ENST00000522900 KIAA1586Q9HCI6 787 aa20.11■□□□□ 0.81
SPIDR-220ENST00000522900 GDAP2Q9NXN4 497 aa20.11■□□□□ 0.81
SPIDR-220ENST00000522900 HSFX1Q9UBD0 423 aa20.11■□□□□ 0.81
SPIDR-220ENST00000522900 SNX9Q9Y5X1 595 aa20.11■□□□□ 0.81
SPIDR-220ENST00000522900 TSC2P49815 1807 aa20.11■□□□□ 0.81
SPIDR-220ENST00000522900 NCANO14594 1321 aa20.1■□□□□ 0.81
SPIDR-220ENST00000522900 HUS1O60921 280 aa20.1■□□□□ 0.81
SPIDR-220ENST00000522900 HAPLN1P10915 354 aaPredicted RBP20.1■□□□□ 0.81
Retrieved 100 of 20,778 RNA–protein pairs in 42.8 ms