RNA–Protein interactions for RNA: ENST00000522122.1

SYNPO-205, Transcript of synaptopodin, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene SYNPO, Length 5,098 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNPO-205ENST00000522122 TEX9Q8N6V9 391 aa14.49□□□□□ -0.09
SYNPO-205ENST00000522122 ICA1LQ8NDH6 482 aa14.49□□□□□ -0.09
SYNPO-205ENST00000522122 TNIP3Q96KP6 325 aa14.49□□□□□ -0.09
SYNPO-205ENST00000522122 ZNF70Q9UC06 446 aaPredicted RBP14.49□□□□□ -0.09
SYNPO-205ENST00000522122 CHMP2BQ9UQN3 213 aa14.49□□□□□ -0.09
SYNPO-205ENST00000522122 DUOX1Q9NRD9 1551 aa14.49□□□□□ -0.09
SYNPO-205ENST00000522122 RASSF10A6NK89 507 aa14.49□□□□□ -0.09
SYNPO-205ENST00000522122 ATP9BO43861 1147 aa14.49□□□□□ -0.09
SYNPO-205ENST00000522122 SPAG6O75602 509 aa14.49□□□□□ -0.09
SYNPO-205ENST00000522122 SREBF1P36956 1147 aa14.49□□□□□ -0.09
SYNPO-205ENST00000522122 EFTUD2Q15029 972 aaKnown RBP eCLIP14.49□□□□□ -0.09
SYNPO-205ENST00000522122 DTX3LQ8TDB6 740 aa14.49□□□□□ -0.09
SYNPO-205ENST00000522122 PGBD4Q96DM1 585 aa14.49□□□□□ -0.09
SYNPO-205ENST00000522122 ZNF560Q96MR9 790 aa14.49□□□□□ -0.09
SYNPO-205ENST00000522122 ZBTB18Q99592 522 aa14.49□□□□□ -0.09
SYNPO-205ENST00000522122 MMTAG2Q9BU76 263 aaKnown RBP14.49□□□□□ -0.09
SYNPO-205ENST00000522122 SPDYE2BA6NHP3 402 aa14.49□□□□□ -0.09
SYNPO-205ENST00000522122 SPDYE6P0CI01 402 aa14.49□□□□□ -0.09
SYNPO-205ENST00000522122 SLC12A3P55017 1021 aa14.49□□□□□ -0.09
SYNPO-205ENST00000522122 RBP5P82980 135 aa14.49□□□□□ -0.09
SYNPO-205ENST00000522122 MTHFD1LQ6UB35 978 aa14.49□□□□□ -0.09
SYNPO-205ENST00000522122 KIF2BQ8N4N8 673 aa14.49□□□□□ -0.09
SYNPO-205ENST00000522122 C1orf131Q8NDD1 294 aaKnown RBP14.49□□□□□ -0.09
SYNPO-205ENST00000522122 STAMBPL1Q96FJ0 436 aa14.49□□□□□ -0.09
SYNPO-205ENST00000522122 OLFML3Q9NRN5 406 aa14.49□□□□□ -0.09
SYNPO-205ENST00000522122 BAZ2BQ9UIF8 2168 aaKnown RBP14.49□□□□□ -0.09
SYNPO-205ENST00000522122 PIK3R2O00459 728 aa14.48□□□□□ -0.09
SYNPO-205ENST00000522122 ALDH18A1P54886 795 aaKnown RBP14.48□□□□□ -0.09
SYNPO-205ENST00000522122 CUL3Q13618 768 aa14.48□□□□□ -0.09
SYNPO-205ENST00000522122 FASTKD1Q53R41 847 aaKnown RBP14.48□□□□□ -0.09
SYNPO-205ENST00000522122 SPATA18Q8TC71 538 aa14.48□□□□□ -0.09
SYNPO-205ENST00000522122 ZNRF3Q9ULT6 936 aa14.48□□□□□ -0.09
SYNPO-205ENST00000522122 EXTL3O43909 919 aa14.48□□□□□ -0.09
SYNPO-205ENST00000522122 TSPY1Q01534 308 aa14.48□□□□□ -0.09
SYNPO-205ENST00000522122 PTK7Q13308 1070 aa14.48□□□□□ -0.09
SYNPO-205ENST00000522122 SWT1Q5T5J6 900 aaKnown RBP14.48□□□□□ -0.09
SYNPO-205ENST00000522122 PGM2Q96G03 612 aa14.48□□□□□ -0.09
SYNPO-205ENST00000522122 INPP4AQ96PE3 977 aaPredicted RBP14.48□□□□□ -0.09
SYNPO-205ENST00000522122 NCANO14594 1321 aa14.48□□□□□ -0.09
SYNPO-205ENST00000522122 BCL9LQ86UU0 1499 aa14.48□□□□□ -0.09
SYNPO-205ENST00000522122 MYL3P08590 195 aa14.48□□□□□ -0.09
SYNPO-205ENST00000522122 SERPINB9P50453 376 aa14.48□□□□□ -0.09
SYNPO-205ENST00000522122 MARSP56192 900 aaKnown RBP14.48□□□□□ -0.09
SYNPO-205ENST00000522122 OR6P1Q8NGX9 317 aa14.48□□□□□ -0.09
SYNPO-205ENST00000522122 ZC3H15Q8WU90 426 aaKnown RBP14.48□□□□□ -0.09
SYNPO-205ENST00000522122 DNAJC19Q96DA6 116 aa14.48□□□□□ -0.09
SYNPO-205ENST00000522122 ATXN7L3BQ96GX2 97 aa14.48□□□□□ -0.09
SYNPO-205ENST00000522122 MAGEB18Q96M61 343 aa14.48□□□□□ -0.09
SYNPO-205ENST00000522122 AGBL1Q96MI9 1066 aa14.48□□□□□ -0.09
SYNPO-205ENST00000522122 KLF6Q99612 283 aaPredicted RBP14.48□□□□□ -0.09
SYNPO-205ENST00000522122 SIK2Q9H0K1 926 aa14.48□□□□□ -0.09
SYNPO-205ENST00000522122 RSAD1Q9HA92 442 aa14.48□□□□□ -0.09
SYNPO-205ENST00000522122 C17orf75Q9HAS0 396 aa14.48□□□□□ -0.09
SYNPO-205ENST00000522122 PAK5Q9P286 719 aa14.48□□□□□ -0.09
SYNPO-205ENST00000522122 SNX9Q9Y5X1 595 aa14.48□□□□□ -0.09
SYNPO-205ENST00000522122 ROBO3Q96MS0 1386 aa14.48□□□□□ -0.09
SYNPO-205ENST00000522122 DDX3XO00571 662 aaKnown RBP eCLIP14.48□□□□□ -0.09
SYNPO-205ENST00000522122 TXNP10599 105 aaKnown RBP14.48□□□□□ -0.09
SYNPO-205ENST00000522122 LCP1P13796 627 aa14.48□□□□□ -0.09
SYNPO-205ENST00000522122 RGS7P49802 495 aa14.48□□□□□ -0.09
SYNPO-205ENST00000522122 PRAMEP78395 509 aa14.48□□□□□ -0.09
SYNPO-205ENST00000522122 CRYMQ14894 314 aa14.48□□□□□ -0.09
SYNPO-205ENST00000522122 DNAL1Q4LDG9 190 aa14.48□□□□□ -0.09
SYNPO-205ENST00000522122 GPAT2Q6NUI2 795 aa14.48□□□□□ -0.09
SYNPO-205ENST00000522122 LVRNQ6Q4G3 990 aa14.48□□□□□ -0.09
SYNPO-205ENST00000522122 ARHGAP18Q8N392 663 aa14.48□□□□□ -0.09
SYNPO-205ENST00000522122 ARMC2Q8NEN0 867 aa14.48□□□□□ -0.09
SYNPO-205ENST00000522122 FBXO25Q8TCJ0 367 aa14.48□□□□□ -0.09
SYNPO-205ENST00000522122 AGR3Q8TD06 166 aa14.48□□□□□ -0.09
SYNPO-205ENST00000522122 MMP19Q99542 508 aa14.48□□□□□ -0.09
SYNPO-205ENST00000522122 ZNF189O75820 626 aaPredicted RBP14.47□□□□□ -0.09
SYNPO-205ENST00000522122 SNRPAP09012 282 aaKnown RBP14.47□□□□□ -0.09
SYNPO-205ENST00000522122 CEP70Q8NHQ1 597 aa14.47□□□□□ -0.09
SYNPO-205ENST00000522122 TARS2Q9BW92 718 aaKnown RBP14.47□□□□□ -0.09
SYNPO-205ENST00000522122 TBX20Q9UMR3 447 aa14.47□□□□□ -0.09
SYNPO-205ENST00000522122 GZMAP12544 262 aa14.47□□□□□ -0.09
SYNPO-205ENST00000522122 ERFP50548 548 aa14.47□□□□□ -0.09
SYNPO-205ENST00000522122 TMED1Q13445 227 aa14.47□□□□□ -0.09
SYNPO-205ENST00000522122 PDCD2Q16342 344 aaPredicted RBP14.47□□□□□ -0.09
SYNPO-205ENST00000522122 HABP4Q5JVS0 413 aaKnown RBP14.47□□□□□ -0.09
SYNPO-205ENST00000522122 GLIS3Q8NEA6 775 aa14.47□□□□□ -0.09
SYNPO-205ENST00000522122 TATDN2Q93075 761 aa14.47□□□□□ -0.09
SYNPO-205ENST00000522122 IFT43Q96FT9 208 aa14.47□□□□□ -0.09
SYNPO-205ENST00000522122 OTUD5Q96G74 571 aa14.47□□□□□ -0.09
SYNPO-205ENST00000522122 NIF3L1Q9GZT8 377 aa14.47□□□□□ -0.09
SYNPO-205ENST00000522122 MARCOQ9UEW3 520 aaPredicted RBP14.47□□□□□ -0.09
SYNPO-205ENST00000522122 RIPK2O43353 540 aa14.47□□□□□ -0.09
SYNPO-205ENST00000522122 IL1R1P14778 569 aa14.47□□□□□ -0.09
SYNPO-205ENST00000522122 EEF1DP29692 281 aaKnown RBP14.47□□□□□ -0.09
SYNPO-205ENST00000522122 GTF2H1P32780 548 aa14.47□□□□□ -0.09
SYNPO-205ENST00000522122 OLFM3Q96PB7 478 aa14.47□□□□□ -0.09
SYNPO-205ENST00000522122 SPATA31A5Q5VU36 1347 aa14.47□□□□□ -0.09
SYNPO-205ENST00000522122 SPATA31A7Q8IWB4 1347 aa14.47□□□□□ -0.09
SYNPO-205ENST00000522122 SNX2O60749 519 aa14.47□□□□□ -0.09
SYNPO-205ENST00000522122 WEE2P0C1S8 567 aa14.47□□□□□ -0.09
SYNPO-205ENST00000522122 TMEM259Q4ZIN3 620 aa14.47□□□□□ -0.09
SYNPO-205ENST00000522122 RARS2Q5T160 578 aaKnown RBP14.47□□□□□ -0.09
SYNPO-205ENST00000522122 XRRA1Q6P2D8 792 aa14.47□□□□□ -0.09
SYNPO-205ENST00000522122 IQCKQ8N0W5 287 aa14.47□□□□□ -0.09
SYNPO-205ENST00000522122 SLC35C1Q96A29 364 aa14.47□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 39.8 ms