RNA–Protein interactions for RNA: ENST00000522012.5

R3HCC1-208, Transcript of R3H domain and coiled-coil containing 1, humanhuman

TSL 1 (best)

Gene R3HCC1, Length 1,500 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
R3HCC1-208ENST00000522012 GNA15P30679 374 aa22.8■■□□□ 1.24
R3HCC1-208ENST00000522012 AARSP49588 968 aaKnown RBP eCLIP22.8■■□□□ 1.24
R3HCC1-208ENST00000522012 RAD23BP54727 409 aa22.8■■□□□ 1.24
R3HCC1-208ENST00000522012 SPA17Q15506 151 aa22.8■■□□□ 1.24
R3HCC1-208ENST00000522012 WSCD1Q658N2 575 aa22.8■■□□□ 1.24
R3HCC1-208ENST00000522012 LIMS2Q7Z4I7 341 aa22.8■■□□□ 1.24
R3HCC1-208ENST00000522012 GLYCTKQ8IVS8 523 aa22.8■■□□□ 1.24
R3HCC1-208ENST00000522012 ACRBPQ8NEB7 543 aa22.8■■□□□ 1.24
R3HCC1-208ENST00000522012 KIAA1524Q8TCG1 905 aa22.8■■□□□ 1.24
R3HCC1-208ENST00000522012 TMEM176AQ96HP8 235 aa22.8■■□□□ 1.24
R3HCC1-208ENST00000522012 TWNKQ96RR1 684 aa22.8■■□□□ 1.24
R3HCC1-208ENST00000522012 EIF3CQ99613 913 aaKnown RBP22.8■■□□□ 1.24
R3HCC1-208ENST00000522012 FAN1Q9Y2M0 1017 aa22.8■■□□□ 1.24
R3HCC1-208ENST00000522012 TRIP11Q15643 1979 aa22.8■■□□□ 1.24
R3HCC1-208ENST00000522012 PDCD11Q14690 1871 aaKnown RBP22.8■■□□□ 1.24
R3HCC1-208ENST00000522012 A0A087X0T9 212 aa22.79■■□□□ 1.24
R3HCC1-208ENST00000522012 THAP12O43422 761 aa22.79■■□□□ 1.24
R3HCC1-208ENST00000522012 TADA2AO75478 443 aa22.79■■□□□ 1.24
R3HCC1-208ENST00000522012 FAM228BP0C875 321 aa22.79■■□□□ 1.24
R3HCC1-208ENST00000522012 ANXA13P27216 316 aa22.79■■□□□ 1.24
R3HCC1-208ENST00000522012 GNL1P36915 607 aaPredicted RBP22.79■■□□□ 1.24
R3HCC1-208ENST00000522012 SLC11A1P49279 550 aa22.79■■□□□ 1.24
R3HCC1-208ENST00000522012 CDR2Q01850 454 aa22.79■■□□□ 1.24
R3HCC1-208ENST00000522012 CYP27A1Q02318 531 aa22.79■■□□□ 1.24
R3HCC1-208ENST00000522012 KBTBD7Q8WVZ9 684 aa22.79■■□□□ 1.24
R3HCC1-208ENST00000522012 ZNF689Q96CS4 500 aaPredicted RBP22.79■■□□□ 1.24
R3HCC1-208ENST00000522012 TMEM175Q9BSA9 504 aa22.79■■□□□ 1.24
R3HCC1-208ENST00000522012 SYT11Q9BT88 431 aa22.79■■□□□ 1.24
R3HCC1-208ENST00000522012 COLEC11Q9BWP8 271 aa22.79■■□□□ 1.24
R3HCC1-208ENST00000522012 NT5C1AQ9BXI3 368 aa22.79■■□□□ 1.24
R3HCC1-208ENST00000522012 TIMM13Q9Y5L4 95 aaPredicted RBP22.79■■□□□ 1.24
R3HCC1-208ENST00000522012 ADGRG1Q9Y653 693 aa22.79■■□□□ 1.24
R3HCC1-208ENST00000522012 ALPK3Q96L96 1907 aa22.79■■□□□ 1.24
R3HCC1-208ENST00000522012 A8MXQ7 604 aa22.78■■□□□ 1.24
R3HCC1-208ENST00000522012 DDX3XO00571 662 aaKnown RBP eCLIP22.78■■□□□ 1.244e-7■■■■■ 27.2
R3HCC1-208ENST00000522012 MMEP08473 750 aa22.78■■□□□ 1.24
R3HCC1-208ENST00000522012 PAEPP09466 180 aa22.78■■□□□ 1.24
R3HCC1-208ENST00000522012 ODC1P11926 461 aa22.78■■□□□ 1.24
R3HCC1-208ENST00000522012 CD19P15391 556 aa22.78■■□□□ 1.24
R3HCC1-208ENST00000522012 CHRNB2P17787 502 aa22.78■■□□□ 1.24
R3HCC1-208ENST00000522012 WARSP23381 471 aaKnown RBP22.78■■□□□ 1.24
R3HCC1-208ENST00000522012 MSNP26038 577 aaKnown RBP22.78■■□□□ 1.24
R3HCC1-208ENST00000522012 BMS1Q14692 1282 aaKnown RBP22.78■■□□□ 1.24
R3HCC1-208ENST00000522012 SLC18A3Q16572 532 aa22.78■■□□□ 1.24
R3HCC1-208ENST00000522012 C17orf53Q8N3J3 647 aaPredicted RBP22.78■■□□□ 1.24
R3HCC1-208ENST00000522012 SLC4A11Q8NBS3 891 aa22.78■■□□□ 1.24
R3HCC1-208ENST00000522012 LNX1Q8TBB1 728 aaPredicted RBP22.78■■□□□ 1.24
R3HCC1-208ENST00000522012 DDX1Q92499 740 aaKnown RBP22.78■■□□□ 1.24
R3HCC1-208ENST00000522012 HEXIM2Q96MH2 286 aaKnown RBP22.78■■□□□ 1.24
R3HCC1-208ENST00000522012 YME1L1Q96TA2 773 aa22.78■■□□□ 1.24
R3HCC1-208ENST00000522012 CXXC1Q9P0U4 656 aaPredicted RBP22.78■■□□□ 1.24
R3HCC1-208ENST00000522012 TTC3P53804 2025 aa22.78■■□□□ 1.24
R3HCC1-208ENST00000522012 TMEM189-UBE2V1I3L0A0 370 aa22.77■■□□□ 1.24
R3HCC1-208ENST00000522012 GALTP07902 379 aa22.77■■□□□ 1.24
R3HCC1-208ENST00000522012 PDGFRBP09619 1106 aa22.77■■□□□ 1.24
R3HCC1-208ENST00000522012 CCDC175P0C221 793 aa22.77■■□□□ 1.24
R3HCC1-208ENST00000522012 FAM163BP0C2L3 166 aa22.77■■□□□ 1.24
R3HCC1-208ENST00000522012 BRD2P25440 801 aaKnown RBP22.77■■□□□ 1.24
R3HCC1-208ENST00000522012 KRT83P78385 493 aa22.77■■□□□ 1.24
R3HCC1-208ENST00000522012 BTG3Q14201 252 aaPredicted RBP22.77■■□□□ 1.24
R3HCC1-208ENST00000522012 HABP4Q5JVS0 413 aaKnown RBP22.77■■□□□ 1.24
R3HCC1-208ENST00000522012 SPOUT1Q5T280 376 aaKnown RBP22.77■■□□□ 1.24
R3HCC1-208ENST00000522012 UNC93AQ86WB7 457 aa22.77■■□□□ 1.24
R3HCC1-208ENST00000522012 ZNF677Q86XU0 584 aa22.77■■□□□ 1.24
R3HCC1-208ENST00000522012 HERVK_113Q902F9 699 aa22.77■■□□□ 1.24
R3HCC1-208ENST00000522012 SUSD3Q96L08 255 aa22.77■■□□□ 1.24
R3HCC1-208ENST00000522012 PDCL3Q9H2J4 239 aa22.77■■□□□ 1.24
R3HCC1-208ENST00000522012 TRMT1Q9NXH9 659 aaKnown RBP22.77■■□□□ 1.24
R3HCC1-208ENST00000522012 PPP2R2CQ9Y2T4 447 aa22.77■■□□□ 1.24
R3HCC1-208ENST00000522012 NR2E3Q9Y5X4 410 aa22.77■■□□□ 1.24
R3HCC1-208ENST00000522012 ZNF263O14978 683 aa22.77■■□□□ 1.24
R3HCC1-208ENST00000522012 PBX3P40426 434 aa22.77■■□□□ 1.24
R3HCC1-208ENST00000522012 BCAR1P56945 870 aa22.77■■□□□ 1.24
R3HCC1-208ENST00000522012 FMO1Q01740 532 aa22.77■■□□□ 1.24
R3HCC1-208ENST00000522012 OSTM1Q86WC4 334 aa22.77■■□□□ 1.24
R3HCC1-208ENST00000522012 METTL23Q86XA0 190 aa22.77■■□□□ 1.24
R3HCC1-208ENST00000522012 TMEM86AQ8N2M4 240 aa22.77■■□□□ 1.24
R3HCC1-208ENST00000522012 SLC30A5Q8TAD4 765 aa22.77■■□□□ 1.24
R3HCC1-208ENST00000522012 ZNF606Q8WXB4 792 aa22.77■■□□□ 1.24
R3HCC1-208ENST00000522012 ZBED2Q9BTP6 218 aa22.77■■□□□ 1.24
R3HCC1-208ENST00000522012 CWH43Q9H720 699 aa22.77■■□□□ 1.24
R3HCC1-208ENST00000522012 REXO2Q9Y3B8 237 aaKnown RBP22.77■■□□□ 1.24
R3HCC1-208ENST00000522012 NME7Q9Y5B8 376 aa22.77■■□□□ 1.24
R3HCC1-208ENST00000522012 SLC4A7Q9Y6M7 1214 aa22.77■■□□□ 1.24
R3HCC1-208ENST00000522012 NT5C1B-RDH14C9J2C7 533 aa22.76■■□□□ 1.23
R3HCC1-208ENST00000522012 M0QZQ0 153 aa22.76■■□□□ 1.23
R3HCC1-208ENST00000522012 HCRTO43612 131 aa22.76■■□□□ 1.23
R3HCC1-208ENST00000522012 TRAPPC3O43617 180 aa22.76■■□□□ 1.23
R3HCC1-208ENST00000522012 LCA5LO95447 670 aa22.76■■□□□ 1.23
R3HCC1-208ENST00000522012 LMO2P25791 158 aa22.76■■□□□ 1.23
R3HCC1-208ENST00000522012 SSTR3P32745 418 aaPredicted RBP22.76■■□□□ 1.23
R3HCC1-208ENST00000522012 ALDH7A1P49419 539 aaKnown RBP22.76■■□□□ 1.23
R3HCC1-208ENST00000522012 CCDC122Q5T0U0 273 aa22.76■■□□□ 1.23
R3HCC1-208ENST00000522012 ACOT1Q86TX2 421 aa22.76■■□□□ 1.23
R3HCC1-208ENST00000522012 CMTR2Q8IYT2 770 aaKnown RBP22.76■■□□□ 1.23
R3HCC1-208ENST00000522012 OLIG1Q8TAK6 271 aa22.76■■□□□ 1.23
R3HCC1-208ENST00000522012 TFAP2BQ92481 460 aa22.76■■□□□ 1.23
R3HCC1-208ENST00000522012 PCDHB18PQ96TA0 734 aa22.76■■□□□ 1.23
R3HCC1-208ENST00000522012 DNAI2Q9GZS0 605 aa22.76■■□□□ 1.23
R3HCC1-208ENST00000522012 NAGPAQ9UK23 515 aa22.76■■□□□ 1.23
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms