RNA–Protein interactions for RNA: ENST00000521667.5

TRAPPC9-210, Transcript of trafficking protein particle complex 9, humanhuman

TSL 1 (best)

Gene TRAPPC9, Length 2,021 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC9-210ENST00000521667 WDTC1Q8N5D0 677 aa19.62■□□□□ 0.73
TRAPPC9-210ENST00000521667 C7orf31Q8N865 590 aa19.62■□□□□ 0.73
TRAPPC9-210ENST00000521667 FEZF2Q8TBJ5 459 aa19.62■□□□□ 0.73
TRAPPC9-210ENST00000521667 WHAMMQ8TF30 809 aa19.62■□□□□ 0.73
TRAPPC9-210ENST00000521667 SNX27Q96L92 541 aa19.62■□□□□ 0.73
TRAPPC9-210ENST00000521667 PLVAPQ9BX97 442 aa19.62■□□□□ 0.73
TRAPPC9-210ENST00000521667 H3BQF6 201 aa19.61■□□□□ 0.73
TRAPPC9-210ENST00000521667 TLR3O15455 904 aaKnown RBP19.61■□□□□ 0.73
TRAPPC9-210ENST00000521667 SLC13A5Q86YT5 568 aaPredicted RBP19.61■□□□□ 0.73
TRAPPC9-210ENST00000521667 SLC4A11Q8NBS3 891 aa19.61■□□□□ 0.73
TRAPPC9-210ENST00000521667 GADD45GIP1Q8TAE8 222 aaPredicted RBP19.61■□□□□ 0.73
TRAPPC9-210ENST00000521667 TMEM40Q8WWA1 233 aa19.61■□□□□ 0.73
TRAPPC9-210ENST00000521667 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP19.61■□□□□ 0.732e-6■■■■■ 51.4
TRAPPC9-210ENST00000521667 LHX5Q9H2C1 402 aa19.61■□□□□ 0.73
TRAPPC9-210ENST00000521667 TTI1O43156 1089 aa19.61■□□□□ 0.73
TRAPPC9-210ENST00000521667 KPNA6O60684 536 aa19.61■□□□□ 0.73
TRAPPC9-210ENST00000521667 C6orf222P0C671 652 aaPredicted RBP19.61■□□□□ 0.73
TRAPPC9-210ENST00000521667 PSMC4P43686 418 aa19.61■□□□□ 0.73
TRAPPC9-210ENST00000521667 APLP1P51693 650 aa19.61■□□□□ 0.73
TRAPPC9-210ENST00000521667 CUL1Q13616 776 aa19.61■□□□□ 0.73
TRAPPC9-210ENST00000521667 TRADDQ15628 312 aa19.61■□□□□ 0.73
TRAPPC9-210ENST00000521667 DENND1BQ6P3S1 775 aa19.61■□□□□ 0.73
TRAPPC9-210ENST00000521667 NME8Q8N427 588 aa19.61■□□□□ 0.73
TRAPPC9-210ENST00000521667 TMEM176AQ96HP8 235 aa19.61■□□□□ 0.73
TRAPPC9-210ENST00000521667 TWNKQ96RR1 684 aa19.61■□□□□ 0.73
TRAPPC9-210ENST00000521667 TRIM6Q9C030 488 aaPredicted RBP19.61■□□□□ 0.73
TRAPPC9-210ENST00000521667 ELOVL4Q9GZR5 314 aa19.61■□□□□ 0.73
TRAPPC9-210ENST00000521667 FAM124BQ9H5Z6 455 aaPredicted RBP19.61■□□□□ 0.73
TRAPPC9-210ENST00000521667 SLTMQ9NWH9 1034 aaKnown RBP eCLIP19.61■□□□□ 0.739e-7■■■■■ 28.9
TRAPPC9-210ENST00000521667 GABRQQ9UN88 632 aa19.61■□□□□ 0.73
TRAPPC9-210ENST00000521667 SBDSQ9Y3A5 250 aaKnown RBP eCLIP19.61■□□□□ 0.73
TRAPPC9-210ENST00000521667 MYADML2A6NDP7 307 aa19.6■□□□□ 0.73
TRAPPC9-210ENST00000521667 PHF2O75151 1096 aa19.6■□□□□ 0.73
TRAPPC9-210ENST00000521667 CYBAP13498 195 aa19.6■□□□□ 0.73
TRAPPC9-210ENST00000521667 AARSP49588 968 aaKnown RBP eCLIP19.6■□□□□ 0.733e-6■■■■■ 61.8
TRAPPC9-210ENST00000521667 CRYBB1P53674 252 aaPredicted RBP19.6■□□□□ 0.73
TRAPPC9-210ENST00000521667 PTPN11Q06124 597 aaPredicted RBP19.6■□□□□ 0.73
TRAPPC9-210ENST00000521667 MFSD14CQ5VZR4 134 aa19.6■□□□□ 0.73
TRAPPC9-210ENST00000521667 ERICH1Q86X53 443 aa19.6■□□□□ 0.73
TRAPPC9-210ENST00000521667 PRELID2Q8N945 189 aa19.6■□□□□ 0.73
TRAPPC9-210ENST00000521667 CELF4Q9BZC1 486 aaKnown RBP19.6■□□□□ 0.73
TRAPPC9-210ENST00000521667 HMGXB4Q9UGU5 601 aa19.6■□□□□ 0.73
TRAPPC9-210ENST00000521667 MTUS1Q9ULD2 1270 aa19.6■□□□□ 0.73
TRAPPC9-210ENST00000521667 PIN4Q9Y237 131 aaKnown RBP19.6■□□□□ 0.73
TRAPPC9-210ENST00000521667 TCRBV5S1A1TA0A578 114 aa19.59■□□□□ 0.73
TRAPPC9-210ENST00000521667 CHRNA3P32297 505 aa19.59■□□□□ 0.73
TRAPPC9-210ENST00000521667 MAN1A1P33908 653 aa19.59■□□□□ 0.73
TRAPPC9-210ENST00000521667 GJA9P57773 515 aa19.59■□□□□ 0.73
TRAPPC9-210ENST00000521667 DR1Q01658 176 aa19.59■□□□□ 0.73
TRAPPC9-210ENST00000521667 MYO1EQ12965 1108 aa19.59■□□□□ 0.73
TRAPPC9-210ENST00000521667 DNAJC24Q6P3W2 148 aa19.59■□□□□ 0.73
TRAPPC9-210ENST00000521667 TTC39CQ8N584 583 aa19.59■□□□□ 0.73
TRAPPC9-210ENST00000521667 TRIB2Q92519 343 aa19.59■□□□□ 0.73
TRAPPC9-210ENST00000521667 ZMAT2Q96NC0 199 aaKnown RBP19.59■□□□□ 0.73
TRAPPC9-210ENST00000521667 CXCL16Q9H2A7 254 aa19.59■□□□□ 0.73
TRAPPC9-210ENST00000521667 IP6K2Q9UHH9 426 aa19.59■□□□□ 0.73
TRAPPC9-210ENST00000521667 HES2Q9Y543 173 aa19.59■□□□□ 0.73
TRAPPC9-210ENST00000521667 TMEM191CA6NGB0 347 aa19.59■□□□□ 0.73
TRAPPC9-210ENST00000521667 GJB6O95452 261 aa19.59■□□□□ 0.73
TRAPPC9-210ENST00000521667 ALDH1A1P00352 501 aa19.59■□□□□ 0.73
TRAPPC9-210ENST00000521667 GABPB1Q06547 395 aaPredicted RBP19.59■□□□□ 0.73
TRAPPC9-210ENST00000521667 INCA1Q0VD86 236 aa19.59■□□□□ 0.73
TRAPPC9-210ENST00000521667 ORC1Q13415 861 aa19.59■□□□□ 0.73
TRAPPC9-210ENST00000521667 DHX34Q14147 1143 aaKnown RBP19.59■□□□□ 0.73
TRAPPC9-210ENST00000521667 ZDHHC14Q8IZN3 488 aa19.59■□□□□ 0.73
TRAPPC9-210ENST00000521667 SEC14L1Q92503 715 aa19.59■□□□□ 0.73
TRAPPC9-210ENST00000521667 DDX27Q96GQ7 796 aaKnown RBP19.59■□□□□ 0.73
TRAPPC9-210ENST00000521667 NXF3Q9H4D5 531 aaKnown RBP19.59■□□□□ 0.73
TRAPPC9-210ENST00000521667 CNTN3Q9P232 1028 aa19.59■□□□□ 0.73
TRAPPC9-210ENST00000521667 LCMT1Q9UIC8 334 aa19.59■□□□□ 0.73
TRAPPC9-210ENST00000521667 STRIP2Q9ULQ0 834 aa19.59■□□□□ 0.73
TRAPPC9-210ENST00000521667 UTP11Q9Y3A2 253 aaKnown RBP19.59■□□□□ 0.73
TRAPPC9-210ENST00000521667 PSTPIP1O43586 416 aa19.58■□□□□ 0.73
TRAPPC9-210ENST00000521667 FAM153BP0C7A2 387 aa19.58■□□□□ 0.73
TRAPPC9-210ENST00000521667 TAP1Q03518 808 aa19.58■□□□□ 0.73
TRAPPC9-210ENST00000521667 ZBTB6Q15916 424 aa19.58■□□□□ 0.73
TRAPPC9-210ENST00000521667 FAM153CQ494X1 144 aa19.58■□□□□ 0.73
TRAPPC9-210ENST00000521667 HSP90B2PQ58FF3 399 aa19.58■□□□□ 0.73
TRAPPC9-210ENST00000521667 GNASQ5JWF2 1037 aa19.58■□□□□ 0.73
TRAPPC9-210ENST00000521667 ALKAL1Q6UXT8 129 aa19.58■□□□□ 0.73
TRAPPC9-210ENST00000521667 RHOT1Q8IXI2 618 aa19.58■□□□□ 0.73
TRAPPC9-210ENST00000521667 MTG1Q9BT17 334 aaPredicted RBP19.58■□□□□ 0.73
TRAPPC9-210ENST00000521667 MED4Q9NPJ6 270 aa19.58■□□□□ 0.73
TRAPPC9-210ENST00000521667 FAM153AQ9UHL3 310 aa19.58■□□□□ 0.73
TRAPPC9-210ENST00000521667 BARX2Q9UMQ3 279 aaPredicted RBP19.58■□□□□ 0.73
TRAPPC9-210ENST00000521667 FAM187AA6NFU0 413 aa19.58■□□□□ 0.72
TRAPPC9-210ENST00000521667 POLR3GO15318 223 aaPredicted RBP19.58■□□□□ 0.72
TRAPPC9-210ENST00000521667 RECQL4O94761 1208 aa19.58■□□□□ 0.72
TRAPPC9-210ENST00000521667 VDRP11473 427 aa19.58■□□□□ 0.72
TRAPPC9-210ENST00000521667 RPL7AP62424 266 aaKnown RBP19.58■□□□□ 0.72
TRAPPC9-210ENST00000521667 HLTFQ14527 1009 aaKnown RBP eCLIP19.58■□□□□ 0.72
TRAPPC9-210ENST00000521667 TAF2Q6P1X5 1199 aa19.58■□□□□ 0.72
TRAPPC9-210ENST00000521667 C3orf20Q8ND61 904 aa19.58■□□□□ 0.72
TRAPPC9-210ENST00000521667 BEST2Q8NFU1 509 aa19.58■□□□□ 0.72
TRAPPC9-210ENST00000521667 MAGOHBQ96A72 148 aaKnown RBP19.58■□□□□ 0.72
TRAPPC9-210ENST00000521667 RAB17Q9H0T7 212 aa19.58■□□□□ 0.72
TRAPPC9-210ENST00000521667 TCRBV7S2A1N4TA0A589 114 aa19.57■□□□□ 0.72
TRAPPC9-210ENST00000521667 FSCN2O14926 492 aa19.57■□□□□ 0.72
TRAPPC9-210ENST00000521667 ECHS1P30084 290 aa19.57■□□□□ 0.72
TRAPPC9-210ENST00000521667 FLT3LGP49771 235 aa19.57■□□□□ 0.72
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms