RNA–Protein interactions for RNA: ENST00000521491.1

CDH17-205, Transcript of cadherin 17, human

TSL 5

Gene CDH17, Length 637 nt, Biotype protein coding, Subcellular localisation Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CDH17-205	ENST00000521491	COPB1	P53618	953 aa	Known RBP	5.86	□□□□□ -1.47
CDH17-205	ENST00000521491	FKBP3	Q00688	224 aa	Known RBP	5.86	□□□□□ -1.47
CDH17-205	ENST00000521491	CTBS	Q01459	385 aa		5.86	□□□□□ -1.47
CDH17-205	ENST00000521491	MGAT3	Q09327	533 aa		5.86	□□□□□ -1.47
CDH17-205	ENST00000521491	PRPF4B	Q13523	1007 aa	Known RBP	5.86	□□□□□ -1.47
CDH17-205	ENST00000521491	NFIL3	Q16649	462 aa		5.86	□□□□□ -1.47
CDH17-205	ENST00000521491	SEZ6	Q53EL9	994 aa		5.86	□□□□□ -1.47
CDH17-205	ENST00000521491	DCAF17	Q5H9S7	520 aa	Predicted RBP	5.86	□□□□□ -1.47
CDH17-205	ENST00000521491	ATF7IP2	Q5U623	682 aa		5.86	□□□□□ -1.47
CDH17-205	ENST00000521491	TTC39B	Q5VTQ0	682 aa	Predicted RBP	5.86	□□□□□ -1.47
CDH17-205	ENST00000521491	EEF1DP3	Q658K8	133 aa		5.86	□□□□□ -1.47
CDH17-205	ENST00000521491	FAM117B	Q6P1L5	589 aa		5.86	□□□□□ -1.47
CDH17-205	ENST00000521491	FOXR2	Q6PJQ5	311 aa		5.86	□□□□□ -1.47
CDH17-205	ENST00000521491	SARM1	Q6SZW1	724 aa		5.86	□□□□□ -1.47
CDH17-205	ENST00000521491	LRRC8D	Q7L1W4	858 aa		5.86	□□□□□ -1.47
CDH17-205	ENST00000521491	CATSPER4	Q7RTX7	472 aa		5.86	□□□□□ -1.47
CDH17-205	ENST00000521491	APTX	Q7Z2E3	356 aa	Known RBP	5.86	□□□□□ -1.47
CDH17-205	ENST00000521491	SRGAP1	Q7Z6B7	1085 aa		5.86	□□□□□ -1.47
CDH17-205	ENST00000521491	RSPH3	Q86UC2	560 aa		5.86	□□□□□ -1.47
CDH17-205	ENST00000521491	ALYREF	Q86V81	257 aa	Known RBP	5.86	□□□□□ -1.47
CDH17-205	ENST00000521491	FAM114A1	Q8IWE2	563 aa		5.86	□□□□□ -1.47
CDH17-205	ENST00000521491	FAM186B	Q8IYM0	893 aa		5.86	□□□□□ -1.47
CDH17-205	ENST00000521491	GADD45GIP1	Q8TAE8	222 aa	Predicted RBP	5.86	□□□□□ -1.47
CDH17-205	ENST00000521491	GOLGA5	Q8TBA6	731 aa		5.86	□□□□□ -1.47
CDH17-205	ENST00000521491	POMGNT1	Q8WZA1	660 aa		5.86	□□□□□ -1.47
CDH17-205	ENST00000521491	SLC30A3	Q99726	388 aa		5.86	□□□□□ -1.47
CDH17-205	ENST00000521491	ACO2	Q99798	780 aa	Known RBP	5.86	□□□□□ -1.47
CDH17-205	ENST00000521491	MSTO1	Q9BUK6	570 aa		5.86	□□□□□ -1.47
CDH17-205	ENST00000521491	NFKBIZ	Q9BYH8	718 aa		5.86	□□□□□ -1.47
CDH17-205	ENST00000521491	CELF4	Q9BZC1	486 aa	Known RBP	5.86	□□□□□ -1.47
CDH17-205	ENST00000521491	GCOM2	Q9BZD3	368 aa	Predicted RBP	5.86	□□□□□ -1.47
CDH17-205	ENST00000521491	OSBPL7	Q9BZF2	842 aa		5.86	□□□□□ -1.47
CDH17-205	ENST00000521491	TRIM5	Q9C035	493 aa		5.86	□□□□□ -1.47
CDH17-205	ENST00000521491	XPO4	Q9C0E2	1151 aa	Known RBP	5.86	□□□□□ -1.47
CDH17-205	ENST00000521491	NIF3L1	Q9GZT8	377 aa		5.86	□□□□□ -1.47
CDH17-205	ENST00000521491	VPS16	Q9H269	839 aa		5.86	□□□□□ -1.47
CDH17-205	ENST00000521491	FZD8	Q9H461	694 aa		5.86	□□□□□ -1.47
CDH17-205	ENST00000521491	AVEN	Q9NQS1	362 aa	Predicted RBP	5.86	□□□□□ -1.47
CDH17-205	ENST00000521491	PRMT7	Q9NVM4	692 aa	Predicted RBP	5.86	□□□□□ -1.47
CDH17-205	ENST00000521491	DMAC2	Q9NW81	257 aa		5.86	□□□□□ -1.47
CDH17-205	ENST00000521491	OGFR	Q9NZT2	677 aa		5.86	□□□□□ -1.47
CDH17-205	ENST00000521491	LIMA1	Q9UHB6	759 aa	Known RBP	5.86	□□□□□ -1.47
CDH17-205	ENST00000521491	KCNG1	Q9UIX4	513 aa		5.86	□□□□□ -1.47
CDH17-205	ENST00000521491	TRPV2	Q9Y5S1	764 aa		5.86	□□□□□ -1.47
CDH17-205	ENST00000521491	CDY2A	Q9Y6F7	541 aa		5.86	□□□□□ -1.47
CDH17-205	ENST00000521491	TRANK1	O15050	2925 aa		5.86	□□□□□ -1.47
CDH17-205	ENST00000521491	TDRD15	B5MCY1	1934 aa	Known RBP	5.86	□□□□□ -1.47
CDH17-205	ENST00000521491	NCOR1	O75376	2440 aa		5.85	□□□□□ -1.47
CDH17-205	ENST00000521491	PPAN-P2RY11	A0A0B4J1V8	794 aa	Predicted RBP	5.85	□□□□□ -1.47
CDH17-205	ENST00000521491	LINC01553	A4QN01	128 aa		5.85	□□□□□ -1.47
CDH17-205	ENST00000521491	ABLIM1	O14639	778 aa		5.85	□□□□□ -1.47
CDH17-205	ENST00000521491	TEX33	O43247	280 aa		5.85	□□□□□ -1.47
CDH17-205	ENST00000521491	PHACTR2	O75167	634 aa		5.85	□□□□□ -1.47
CDH17-205	ENST00000521491	GJB5	O95377	273 aa		5.85	□□□□□ -1.47
CDH17-205	ENST00000521491	NPTXR	O95502	500 aa		5.85	□□□□□ -1.47
CDH17-205	ENST00000521491	CHRNA1	P02708	482 aa		5.85	□□□□□ -1.47
CDH17-205	ENST00000521491	PTMA	P06454	111 aa	Known RBP	5.85	□□□□□ -1.47
CDH17-205	ENST00000521491	TPM3	P06753	285 aa		5.85	□□□□□ -1.47
CDH17-205	ENST00000521491	TRIM49	P0CI25	452 aa		5.85	□□□□□ -1.47
CDH17-205	ENST00000521491	TRIM49C	P0CI26	452 aa		5.85	□□□□□ -1.47
CDH17-205	ENST00000521491	CKB	P12277	381 aa		5.85	□□□□□ -1.47
CDH17-205	ENST00000521491	DARS	P14868	501 aa	Known RBP	5.85	□□□□□ -1.47
CDH17-205	ENST00000521491	SELP	P16109	830 aa		5.85	□□□□□ -1.47
CDH17-205	ENST00000521491	ARF4	P18085	180 aa	Predicted RBP	5.85	□□□□□ -1.47
CDH17-205	ENST00000521491	NFKB1	P19838	968 aa		5.85	□□□□□ -1.47
CDH17-205	ENST00000521491	GART	P22102	1010 aa		5.85	□□□□□ -1.47
CDH17-205	ENST00000521491	SCP2	P22307	547 aa		5.85	□□□□□ -1.47
CDH17-205	ENST00000521491	KCNA5	P22460	613 aa		5.85	□□□□□ -1.47
CDH17-205	ENST00000521491	SFPQ	P23246	707 aa	Known RBP eCLIP	5.85	□□□□□ -1.47
CDH17-205	ENST00000521491	EIF4B	P23588	611 aa	Known RBP	5.85	□□□□□ -1.47
CDH17-205	ENST00000521491	RPL13	P26373	211 aa	Known RBP	5.85	□□□□□ -1.47
CDH17-205	ENST00000521491	EEF1G	P26641	437 aa	Known RBP	5.85	□□□□□ -1.47
CDH17-205	ENST00000521491	PSMC2	P35998	433 aa	Known RBP	5.85	□□□□□ -1.47
CDH17-205	ENST00000521491	TNFSF9	P41273	254 aa		5.85	□□□□□ -1.47
CDH17-205	ENST00000521491	MAP2K3	P46734	347 aa		5.85	□□□□□ -1.47
CDH17-205	ENST00000521491	KCNJ6	P48051	423 aa		5.85	□□□□□ -1.47
CDH17-205	ENST00000521491	ACOT2	P49753	483 aa		5.85	□□□□□ -1.47
CDH17-205	ENST00000521491	CRYBB1	P53674	252 aa	Predicted RBP	5.85	□□□□□ -1.47
CDH17-205	ENST00000521491	UBASH3A	P57075	661 aa		5.85	□□□□□ -1.47
CDH17-205	ENST00000521491	OSTN	P61366	133 aa		5.85	□□□□□ -1.47
CDH17-205	ENST00000521491	ERVK-21	P61565	698 aa		5.85	□□□□□ -1.47
CDH17-205	ENST00000521491	POU5F1B	Q06416	359 aa		5.85	□□□□□ -1.47
CDH17-205	ENST00000521491	SPAG1	Q07617	926 aa		5.85	□□□□□ -1.47
CDH17-205	ENST00000521491	NFX1	Q12986	1120 aa	Known RBP	5.85	□□□□□ -1.47
CDH17-205	ENST00000521491	BFSP2	Q13515	415 aa		5.85	□□□□□ -1.47
CDH17-205	ENST00000521491	GAS6	Q14393	721 aa		5.85	□□□□□ -1.47
CDH17-205	ENST00000521491	MBTPS1	Q14703	1052 aa		5.85	□□□□□ -1.47
CDH17-205	ENST00000521491	NOLC1	Q14978	699 aa	Known RBP eCLIP	5.85	□□□□□ -1.47
CDH17-205	ENST00000521491	SNRNP35	Q16560	246 aa	Known RBP	5.85	□□□□□ -1.47
CDH17-205	ENST00000521491	FAM187B	Q17R55	369 aa		5.85	□□□□□ -1.47
CDH17-205	ENST00000521491	TRIM71	Q2Q1W2	868 aa	Known RBP	5.85	□□□□□ -1.47
CDH17-205	ENST00000521491	ZNF568	Q3ZCX4	644 aa		5.85	□□□□□ -1.47
CDH17-205	ENST00000521491	MIIP	Q5JXC2	388 aa		5.85	□□□□□ -1.47
CDH17-205	ENST00000521491	ZBTB41	Q5SVQ8	909 aa		5.85	□□□□□ -1.47
CDH17-205	ENST00000521491	ZNF618	Q5T7W0	954 aa		5.85	□□□□□ -1.47
CDH17-205	ENST00000521491	ZNF468	Q5VIY5	522 aa	Predicted RBP	5.85	□□□□□ -1.47
CDH17-205	ENST00000521491	TCERG1L	Q5VWI1	586 aa		5.85	□□□□□ -1.47
CDH17-205	ENST00000521491	MPZL3	Q6UWV2	235 aa		5.85	□□□□□ -1.47
CDH17-205	ENST00000521491	ZPBP2	Q6X784	338 aa		5.85	□□□□□ -1.47
CDH17-205	ENST00000521491	LIN28B	Q6ZN17	250 aa	Known RBP eCLIP	5.85	□□□□□ -1.47

Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms