RNA–Protein interactions for RNA: ENST00000521387.1

CTNNA1-227, Transcript of catenin alpha 1, humanhuman

TSL 2

Gene CTNNA1, Length 871 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNA1-227ENST00000521387 MXRA8Q9BRK3 442 aa8.07□□□□□ -1.12
CTNNA1-227ENST00000521387 SDF4Q9BRK5 362 aa8.07□□□□□ -1.12
CTNNA1-227ENST00000521387 PI4K2AQ9BTU6 479 aa8.07□□□□□ -1.12
CTNNA1-227ENST00000521387 NCOA5Q9HCD5 579 aaKnown RBP8.07□□□□□ -1.12
CTNNA1-227ENST00000521387 TFIP11Q9UBB9 837 aaKnown RBP8.07□□□□□ -1.12
CTNNA1-227ENST00000521387 MAN2B2Q9Y2E5 1009 aa8.07□□□□□ -1.12
CTNNA1-227ENST00000521387 F8P00451 2351 aa8.07□□□□□ -1.12
CTNNA1-227ENST00000521387 PCNX1Q96RV3 2341 aa8.07□□□□□ -1.12
CTNNA1-227ENST00000521387 SPENQ96T58 3664 aaKnown RBP8.07□□□□□ -1.12
CTNNA1-227ENST00000521387 KNL1Q8NG31 2342 aa8.06□□□□□ -1.12
CTNNA1-227ENST00000521387 DDX39AO00148 427 aaKnown RBP8.06□□□□□ -1.12
CTNNA1-227ENST00000521387 TADA2AO75478 443 aa8.06□□□□□ -1.12
CTNNA1-227ENST00000521387 SEC24AO95486 1093 aa8.06□□□□□ -1.12
CTNNA1-227ENST00000521387 HLA-EP13747 358 aa8.06□□□□□ -1.12
CTNNA1-227ENST00000521387 SFPQP23246 707 aaKnown RBP eCLIP8.06□□□□□ -1.12
CTNNA1-227ENST00000521387 U2AF2P26368 475 aaKnown RBP eCLIP8.06□□□□□ -1.12
CTNNA1-227ENST00000521387 TMOD1P28289 359 aa8.06□□□□□ -1.12
CTNNA1-227ENST00000521387 NASPP49321 788 aaPredicted RBP8.06□□□□□ -1.12
CTNNA1-227ENST00000521387 GALK1P51570 392 aa8.06□□□□□ -1.12
CTNNA1-227ENST00000521387 EPHA5P54756 1037 aa8.06□□□□□ -1.12
CTNNA1-227ENST00000521387 NFKB2Q00653 900 aa8.06□□□□□ -1.12
CTNNA1-227ENST00000521387 KCNH2Q12809 1159 aa8.06□□□□□ -1.12
CTNNA1-227ENST00000521387 GRSF1Q12849 480 aaKnown RBP eCLIP8.06□□□□□ -1.12
CTNNA1-227ENST00000521387 MYO1EQ12965 1108 aa8.06□□□□□ -1.12
CTNNA1-227ENST00000521387 STXBP5Q5T5C0 1151 aa8.06□□□□□ -1.12
CTNNA1-227ENST00000521387 LYSMD4Q5XG99 296 aa8.06□□□□□ -1.12
CTNNA1-227ENST00000521387 ANO7Q6IWH7 933 aa8.06□□□□□ -1.12
CTNNA1-227ENST00000521387 MFSD6Q6ZSS7 791 aa8.06□□□□□ -1.12
CTNNA1-227ENST00000521387 PDZD4Q76G19 769 aaPredicted RBP8.06□□□□□ -1.12
CTNNA1-227ENST00000521387 CYB5R4Q7L1T6 521 aa8.06□□□□□ -1.12
CTNNA1-227ENST00000521387 CEP57Q86XR8 500 aa8.06□□□□□ -1.12
CTNNA1-227ENST00000521387 KSR1Q8IVT5 923 aa8.06□□□□□ -1.12
CTNNA1-227ENST00000521387 NCOA7Q8NI08 942 aa8.06□□□□□ -1.12
CTNNA1-227ENST00000521387 SYAP1Q96A49 352 aaPredicted RBP8.06□□□□□ -1.12
CTNNA1-227ENST00000521387 CNOT6LQ96LI5 555 aaKnown RBP8.06□□□□□ -1.12
CTNNA1-227ENST00000521387 SCLT1Q96NL6 688 aa8.06□□□□□ -1.12
CTNNA1-227ENST00000521387 PPP1R9BQ96SB3 815 aa8.06□□□□□ -1.12
CTNNA1-227ENST00000521387 CEP89Q96ST8 783 aa8.06□□□□□ -1.12
CTNNA1-227ENST00000521387 CPNE5Q9HCH3 593 aa8.06□□□□□ -1.12
CTNNA1-227ENST00000521387 HPS4Q9NQG7 708 aa8.06□□□□□ -1.12
CTNNA1-227ENST00000521387 AGPAT5Q9NUQ2 364 aa8.06□□□□□ -1.12
CTNNA1-227ENST00000521387 CEP72Q9P209 647 aa8.06□□□□□ -1.12
CTNNA1-227ENST00000521387 MTRRQ9UBK8 725 aa8.06□□□□□ -1.12
CTNNA1-227ENST00000521387 NAP1L2Q9ULW6 460 aaPredicted RBP8.06□□□□□ -1.12
CTNNA1-227ENST00000521387 HES2Q9Y543 173 aa8.06□□□□□ -1.12
CTNNA1-227ENST00000521387 NAV3Q8IVL0 2385 aa8.06□□□□□ -1.12
CTNNA1-227ENST00000521387 FDPSP14324 419 aaKnown RBP8.05□□□□□ -1.12
CTNNA1-227ENST00000521387 MCM5P33992 734 aa8.05□□□□□ -1.12
CTNNA1-227ENST00000521387 HOXD12P35452 270 aa8.05□□□□□ -1.12
CTNNA1-227ENST00000521387 CLDN6P56747 220 aa8.05□□□□□ -1.12
CTNNA1-227ENST00000521387 KRT85P78386 507 aa8.05□□□□□ -1.12
CTNNA1-227ENST00000521387 CCDC173Q0VFZ6 552 aa8.05□□□□□ -1.12
CTNNA1-227ENST00000521387 MAP7D1Q3KQU3 841 aa8.05□□□□□ -1.12
CTNNA1-227ENST00000521387 ITPRIPL2Q3MIP1 535 aa8.05□□□□□ -1.12
CTNNA1-227ENST00000521387 ARHGAP29Q52LW3 1261 aa8.05□□□□□ -1.12
CTNNA1-227ENST00000521387 C2orf27AQ580R0 203 aa8.05□□□□□ -1.12
CTNNA1-227ENST00000521387 CCDC183Q5T5S1 534 aa8.05□□□□□ -1.12
CTNNA1-227ENST00000521387 ARHGAP40Q5TG30 622 aa8.05□□□□□ -1.12
CTNNA1-227ENST00000521387 CATSPER4Q7RTX7 472 aa8.05□□□□□ -1.12
CTNNA1-227ENST00000521387 ARID3BQ8IVW6 561 aaPredicted RBP8.05□□□□□ -1.12
CTNNA1-227ENST00000521387 CKAP2LQ8IYA6 745 aa8.05□□□□□ -1.12
CTNNA1-227ENST00000521387 DEFB119Q8N690 84 aa8.05□□□□□ -1.12
CTNNA1-227ENST00000521387 FAM184AQ8NB25 1140 aa8.05□□□□□ -1.12
CTNNA1-227ENST00000521387 TSTD1Q8NFU3 115 aa8.05□□□□□ -1.12
CTNNA1-227ENST00000521387 CEP76Q8TAP6 659 aa8.05□□□□□ -1.12
CTNNA1-227ENST00000521387 TSC1Q92574 1164 aa8.05□□□□□ -1.12
CTNNA1-227ENST00000521387 E2F7Q96AV8 911 aa8.05□□□□□ -1.12
CTNNA1-227ENST00000521387 ZSCAN10Q96SZ4 725 aaPredicted RBP8.05□□□□□ -1.12
CTNNA1-227ENST00000521387 EIF2AQ9BY44 585 aaKnown RBP8.05□□□□□ -1.12
CTNNA1-227ENST00000521387 LRRC3Q9BY71 257 aa8.05□□□□□ -1.12
CTNNA1-227ENST00000521387 TSPY26PQ9H489 355 aa8.05□□□□□ -1.12
CTNNA1-227ENST00000521387 PRDM16Q9HAZ2 1276 aa8.05□□□□□ -1.12
CTNNA1-227ENST00000521387 RRAGDQ9NQL2 400 aaPredicted RBP8.05□□□□□ -1.12
CTNNA1-227ENST00000521387 RYDENQ9NUL5 291 aaKnown RBP8.05□□□□□ -1.12
CTNNA1-227ENST00000521387 IPPQ9Y573 584 aa8.05□□□□□ -1.12
CTNNA1-227ENST00000521387 CDY1Q9Y6F8 540 aa8.05□□□□□ -1.12
CTNNA1-227ENST00000521387 NID2Q14112 1375 aa8.05□□□□□ -1.12
CTNNA1-227ENST00000521387 SF3B1O75533 1304 aaKnown RBP eCLIP8.04□□□□□ -1.12
CTNNA1-227ENST00000521387 OTOGQ6ZRI0 2925 aa8.04□□□□□ -1.12
CTNNA1-227ENST00000521387 KLF18A0A0U1RQI7 1052 aa8.04□□□□□ -1.12
CTNNA1-227ENST00000521387 H3BQV1 296 aa8.04□□□□□ -1.12
CTNNA1-227ENST00000521387 ST8SIA5O15466 376 aa8.04□□□□□ -1.12
CTNNA1-227ENST00000521387 MAP3K7O43318 606 aa8.04□□□□□ -1.12
CTNNA1-227ENST00000521387 ABLIM3O94929 683 aa8.04□□□□□ -1.12
CTNNA1-227ENST00000521387 KIF4AO95239 1232 aa8.04□□□□□ -1.12
CTNNA1-227ENST00000521387 AFPP02771 609 aaKnown RBP8.04□□□□□ -1.12
CTNNA1-227ENST00000521387 MYL4P12829 197 aa8.04□□□□□ -1.12
CTNNA1-227ENST00000521387 ITGA4P13612 1032 aa8.04□□□□□ -1.12
CTNNA1-227ENST00000521387 LIG1P18858 919 aa8.04□□□□□ -1.12
CTNNA1-227ENST00000521387 ADD1P35611 737 aaKnown RBP8.04□□□□□ -1.12
CTNNA1-227ENST00000521387 HMGN5P82970 282 aaKnown RBP8.04□□□□□ -1.12
CTNNA1-227ENST00000521387 NFATC3Q12968 1075 aa8.04□□□□□ -1.12
CTNNA1-227ENST00000521387 TRAF1Q13077 416 aa8.04□□□□□ -1.12
CTNNA1-227ENST00000521387 HSP90AA2PQ14568 343 aaPredicted RBP8.04□□□□□ -1.12
CTNNA1-227ENST00000521387 TARBP2Q15633 366 aaKnown RBP8.04□□□□□ -1.12
CTNNA1-227ENST00000521387 UBE2SQ16763 222 aa8.04□□□□□ -1.12
CTNNA1-227ENST00000521387 PTPRNQ16849 979 aa8.04□□□□□ -1.12
CTNNA1-227ENST00000521387 CYP4A22Q5TCH4 519 aa8.04□□□□□ -1.12
CTNNA1-227ENST00000521387 DBX2Q6ZNG2 339 aa8.04□□□□□ -1.12
CTNNA1-227ENST00000521387 RALYLQ86SE5 291 aaKnown RBP8.04□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 19.1 ms