RNA–Protein interactions for RNA: ENST00000521331.5

PRKDC-204, Transcript of protein kinase, DNA-activated, catalytic subunit, humanhuman

TSL 2

Gene PRKDC, Length 1,087 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKDC-204ENST00000521331 H3BQV1 296 aa16.13■□□□□ 0.17
PRKDC-204ENST00000521331 PPEF2O14830 753 aa16.13■□□□□ 0.17
PRKDC-204ENST00000521331 CYP11A1P05108 521 aa16.13■□□□□ 0.17
PRKDC-204ENST00000521331 GABRR2P28476 465 aa16.13■□□□□ 0.17
PRKDC-204ENST00000521331 CTHP32929 405 aa16.13■□□□□ 0.17
PRKDC-204ENST00000521331 SOX9P48436 509 aa16.13■□□□□ 0.17
PRKDC-204ENST00000521331 ZNF131P52739 623 aa16.13■□□□□ 0.17
PRKDC-204ENST00000521331 PLCB2Q00722 1185 aa16.13■□□□□ 0.17
PRKDC-204ENST00000521331 SPEM2Q0P670 501 aa16.13■□□□□ 0.17
PRKDC-204ENST00000521331 SIM2Q14190 667 aaPredicted RBP16.13■□□□□ 0.17
PRKDC-204ENST00000521331 VEPH1Q14D04 833 aa16.13■□□□□ 0.17
PRKDC-204ENST00000521331 LPAL2Q16609 132 aa16.13■□□□□ 0.17
PRKDC-204ENST00000521331 GPR158Q5T848 1215 aa16.13■□□□□ 0.17
PRKDC-204ENST00000521331 C9orf57Q5W0N0 161 aa16.13■□□□□ 0.17
PRKDC-204ENST00000521331 JADE1Q6IE81 842 aa16.13■□□□□ 0.17
PRKDC-204ENST00000521331 LONP2Q86WA8 852 aa16.13■□□□□ 0.17
PRKDC-204ENST00000521331 SYNPOQ8N3V7 929 aa16.13■□□□□ 0.17
PRKDC-204ENST00000521331 NETO1Q8TDF5 533 aa16.13■□□□□ 0.17
PRKDC-204ENST00000521331 FAM212AQ96EL1 285 aa16.13■□□□□ 0.17
PRKDC-204ENST00000521331 GCNAQ96QF7 691 aa16.13■□□□□ 0.17
PRKDC-204ENST00000521331 MKNK1Q9BUB5 465 aa16.13■□□□□ 0.17
PRKDC-204ENST00000521331 CPSF3Q9UKF6 684 aaKnown RBP16.13■□□□□ 0.17
PRKDC-204ENST00000521331 CHURC1-FNTBB4DL54 471 aa16.12■□□□□ 0.17
PRKDC-204ENST00000521331 PIRO00625 290 aa16.12■□□□□ 0.17
PRKDC-204ENST00000521331 TRAK2O60296 914 aa16.12■□□□□ 0.17
PRKDC-204ENST00000521331 CDC25CP30307 473 aa16.12■□□□□ 0.17
PRKDC-204ENST00000521331 UBA7P41226 1012 aa16.12■□□□□ 0.17
PRKDC-204ENST00000521331 FNTBP49356 437 aa16.12■□□□□ 0.17
PRKDC-204ENST00000521331 SMARCB1Q12824 385 aa16.12■□□□□ 0.17
PRKDC-204ENST00000521331 TMEM132DQ14C87 1099 aa16.12■□□□□ 0.17
PRKDC-204ENST00000521331 TTC9BQ8N6N2 239 aa16.12■□□□□ 0.17
PRKDC-204ENST00000521331 TMEM209Q96SK2 561 aa16.12■□□□□ 0.17
PRKDC-204ENST00000521331 SEPT5Q99719 369 aaPredicted RBP16.12■□□□□ 0.17
PRKDC-204ENST00000521331 ZCWPW1Q9H0M4 648 aa16.12■□□□□ 0.17
PRKDC-204ENST00000521331 ASB7Q9H672 318 aa16.12■□□□□ 0.17
PRKDC-204ENST00000521331 TASP1Q9H6P5 420 aa16.12■□□□□ 0.17
PRKDC-204ENST00000521331 RBM12Q9NTZ6 932 aaKnown RBP16.12■□□□□ 0.17
PRKDC-204ENST00000521331 ZMYM5Q9UJ78 669 aa16.12■□□□□ 0.17
PRKDC-204ENST00000521331 ACACBO00763 2458 aa16.12■□□□□ 0.17
PRKDC-204ENST00000521331 ANO9A1A5B4 782 aa16.11■□□□□ 0.17
PRKDC-204ENST00000521331 DCDC2BA2VCK2 349 aa16.11■□□□□ 0.17
PRKDC-204ENST00000521331 K7ESF4 209 aa16.11■□□□□ 0.17
PRKDC-204ENST00000521331 FOXD2O60548 495 aaPredicted RBP16.11■□□□□ 0.17
PRKDC-204ENST00000521331 TBCAO75347 108 aaKnown RBP16.11■□□□□ 0.17
PRKDC-204ENST00000521331 SOAT2O75908 522 aa16.11■□□□□ 0.17
PRKDC-204ENST00000521331 KRT18P05783 430 aaKnown RBP16.11■□□□□ 0.17
PRKDC-204ENST00000521331 HOXA6P31267 233 aa16.11■□□□□ 0.17
PRKDC-204ENST00000521331 RABEP1Q15276 862 aa16.11■□□□□ 0.17
PRKDC-204ENST00000521331 SLC39A12Q504Y0 691 aa16.11■□□□□ 0.17
PRKDC-204ENST00000521331 TXNDC11Q6PKC3 985 aa16.11■□□□□ 0.17
PRKDC-204ENST00000521331 Q6ZS52 159 aa16.11■□□□□ 0.17
PRKDC-204ENST00000521331 ARHGAP30Q7Z6I6 1101 aaPredicted RBP16.11■□□□□ 0.17
PRKDC-204ENST00000521331 METTL23Q86XA0 190 aa16.11■□□□□ 0.17
PRKDC-204ENST00000521331 THEM5Q8N1Q8 247 aa16.11■□□□□ 0.17
PRKDC-204ENST00000521331 OR10T2Q8NGX3 314 aa16.11■□□□□ 0.17
PRKDC-204ENST00000521331 BPIFB1Q8TDL5 484 aa16.11■□□□□ 0.17
PRKDC-204ENST00000521331 C2orf15Q8WU43 125 aaKnown RBP16.11■□□□□ 0.17
PRKDC-204ENST00000521331 LRRC3BQ96PB8 259 aa16.11■□□□□ 0.17
PRKDC-204ENST00000521331 THG1LQ9NWX6 298 aaKnown RBP16.11■□□□□ 0.17
PRKDC-204ENST00000521331 GTSE1Q9NYZ3 720 aa16.11■□□□□ 0.17
PRKDC-204ENST00000521331 C2CD2Q9Y426 696 aa16.11■□□□□ 0.17
PRKDC-204ENST00000521331 PDCD11Q14690 1871 aaKnown RBP16.11■□□□□ 0.17
PRKDC-204ENST00000521331 TICRRQ7Z2Z1 1910 aa16.11■□□□□ 0.17
PRKDC-204ENST00000521331 SLC30A4O14863 429 aa16.1■□□□□ 0.17
PRKDC-204ENST00000521331 HRO43593 1189 aa16.1■□□□□ 0.17
PRKDC-204ENST00000521331 BMP15O95972 392 aa16.1■□□□□ 0.17
PRKDC-204ENST00000521331 NFICP08651 508 aa16.1■□□□□ 0.17
PRKDC-204ENST00000521331 MCM2P49736 904 aa16.1■□□□□ 0.17
PRKDC-204ENST00000521331 GTF2BQ00403 316 aa16.1■□□□□ 0.17
PRKDC-204ENST00000521331 POU5F1Q01860 360 aaKnown RBP16.1■□□□□ 0.17
PRKDC-204ENST00000521331 DMWDQ09019 674 aa16.1■□□□□ 0.17
PRKDC-204ENST00000521331 CCINQ13939 588 aa16.1■□□□□ 0.17
PRKDC-204ENST00000521331 DHX8Q14562 1220 aaKnown RBP16.1■□□□□ 0.17
PRKDC-204ENST00000521331 PON2Q15165 354 aa16.1■□□□□ 0.17
PRKDC-204ENST00000521331 PTPAQ15257 358 aa16.1■□□□□ 0.17
PRKDC-204ENST00000521331 TAF12Q16514 161 aa16.1■□□□□ 0.17
PRKDC-204ENST00000521331 CSRP2Q16527 193 aa16.1■□□□□ 0.17
PRKDC-204ENST00000521331 MGAT5BQ3V5L5 792 aa16.1■□□□□ 0.17
PRKDC-204ENST00000521331 SLC39A4Q6P5W5 647 aa16.1■□□□□ 0.17
PRKDC-204ENST00000521331 GPIHBP1Q8IV16 184 aa16.1■□□□□ 0.17
PRKDC-204ENST00000521331 RASSF8Q8NHQ8 419 aa16.1■□□□□ 0.17
PRKDC-204ENST00000521331 TTC8Q8TAM2 541 aa16.1■□□□□ 0.17
PRKDC-204ENST00000521331 ZFYVE19Q96K21 471 aa16.1■□□□□ 0.17
PRKDC-204ENST00000521331 CNTNAP3BQ96NU0 1288 aa16.1■□□□□ 0.17
PRKDC-204ENST00000521331 LPIN3Q9BQK8 851 aa16.1■□□□□ 0.17
PRKDC-204ENST00000521331 CNTNAP3Q9BZ76 1288 aa16.1■□□□□ 0.17
PRKDC-204ENST00000521331 ZHX3Q9H4I2 956 aa16.1■□□□□ 0.17
PRKDC-204ENST00000521331 SEMA4GQ9NTN9 838 aa16.1■□□□□ 0.17
PRKDC-204ENST00000521331 BLOC1S4Q9NUP1 217 aa16.1■□□□□ 0.17
PRKDC-204ENST00000521331 GTF3C3Q9Y5Q9 886 aa16.1■□□□□ 0.17
PRKDC-204ENST00000521331 DYNC1LI1Q9Y6G9 523 aaKnown RBP16.1■□□□□ 0.17
PRKDC-204ENST00000521331 CACNA1BQ00975 2339 aa16.1■□□□□ 0.17
PRKDC-204ENST00000521331 CYB561D2O14569 222 aa16.09■□□□□ 0.17
PRKDC-204ENST00000521331 PRAMEF12O95522 483 aa16.09■□□□□ 0.17
PRKDC-204ENST00000521331 GJB2P29033 226 aa16.09■□□□□ 0.17
PRKDC-204ENST00000521331 LONP1P36776 959 aaKnown RBP16.09■□□□□ 0.17
PRKDC-204ENST00000521331 TAF6P49848 677 aa16.09■□□□□ 0.17
PRKDC-204ENST00000521331 CYP4F8P98187 520 aa16.09■□□□□ 0.17
PRKDC-204ENST00000521331 ITPRIPL2Q3MIP1 535 aa16.09■□□□□ 0.17
PRKDC-204ENST00000521331 WDR44Q5JSH3 913 aa16.09■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 22.9 ms