RNA–Protein interactions for RNA: ENST00000517880.1

CPEB4-203, Transcript of cytoplasmic polyadenylation element binding protein 4, humanhuman

TSL 1 (best) BASIC

Gene CPEB4, Length 1,416 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPEB4-203ENST00000517880 UTP11Q9Y3A2 253 aaKnown RBP11.42□□□□□ -0.58
CPEB4-203ENST00000517880 PODXLO00592 558 aa11.41□□□□□ -0.58
CPEB4-203ENST00000517880 FSCN2O14926 492 aa11.41□□□□□ -0.58
CPEB4-203ENST00000517880 PHF2O75151 1096 aa11.41□□□□□ -0.58
CPEB4-203ENST00000517880 CILPO75339 1184 aa11.41□□□□□ -0.58
CPEB4-203ENST00000517880 NPTXRO95502 500 aa11.41□□□□□ -0.58
CPEB4-203ENST00000517880 ATF7P17544 494 aaPredicted RBP11.41□□□□□ -0.58
CPEB4-203ENST00000517880 RAD23BP54727 409 aa11.41□□□□□ -0.58
CPEB4-203ENST00000517880 GSCP56915 257 aaPredicted RBP11.41□□□□□ -0.58
CPEB4-203ENST00000517880 GJA9P57773 515 aa11.41□□□□□ -0.58
CPEB4-203ENST00000517880 PURAQ00577 322 aaKnown RBP11.41□□□□□ -0.58
CPEB4-203ENST00000517880 PIGHQ14442 188 aaPredicted RBP11.41□□□□□ -0.58
CPEB4-203ENST00000517880 ZBTB6Q15916 424 aa11.41□□□□□ -0.58
CPEB4-203ENST00000517880 CNGA2Q16280 664 aa11.41□□□□□ -0.58
CPEB4-203ENST00000517880 CYP1B1Q16678 543 aa11.41□□□□□ -0.58
CPEB4-203ENST00000517880 PTPROQ16827 1216 aa11.41□□□□□ -0.58
CPEB4-203ENST00000517880 GLIPR1L2Q4G1C9 344 aa11.41□□□□□ -0.58
CPEB4-203ENST00000517880 RHOT1Q8IXI2 618 aa11.41□□□□□ -0.58
CPEB4-203ENST00000517880 MREGQ8N565 214 aa11.41□□□□□ -0.58
CPEB4-203ENST00000517880 LRRC52Q8N7C0 313 aa11.41□□□□□ -0.58
CPEB4-203ENST00000517880 C7orf31Q8N865 590 aa11.41□□□□□ -0.58
CPEB4-203ENST00000517880 SEC14L1Q92503 715 aa11.41□□□□□ -0.58
CPEB4-203ENST00000517880 KRT35Q92764 455 aa11.41□□□□□ -0.58
CPEB4-203ENST00000517880 TMEM176AQ96HP8 235 aa11.41□□□□□ -0.58
CPEB4-203ENST00000517880 PPP1R16BQ96T49 567 aa11.41□□□□□ -0.58
CPEB4-203ENST00000517880 C11orf70Q9BRQ4 267 aa11.41□□□□□ -0.58
CPEB4-203ENST00000517880 MTG1Q9BT17 334 aaPredicted RBP11.41□□□□□ -0.58
CPEB4-203ENST00000517880 UPF3AQ9H1J1 476 aaKnown RBP11.41□□□□□ -0.58
CPEB4-203ENST00000517880 HOMER3Q9NSC5 361 aa11.41□□□□□ -0.58
CPEB4-203ENST00000517880 PCYOX1Q9UHG3 505 aa11.41□□□□□ -0.58
CPEB4-203ENST00000517880 FEZ2Q9UHY8 353 aaPredicted RBP11.41□□□□□ -0.58
CPEB4-203ENST00000517880 HPCAL4Q9UM19 191 aa11.41□□□□□ -0.58
CPEB4-203ENST00000517880 BARX2Q9UMQ3 279 aaPredicted RBP11.41□□□□□ -0.58
CPEB4-203ENST00000517880 GTF3C5Q9Y5Q8 519 aaPredicted RBP11.41□□□□□ -0.58
CPEB4-203ENST00000517880 TMEM191CA6NGB0 347 aa11.4□□□□□ -0.58
CPEB4-203ENST00000517880 TLR3O15455 904 aaKnown RBP11.4□□□□□ -0.58
CPEB4-203ENST00000517880 MEFVO15553 781 aaPredicted RBP11.4□□□□□ -0.58
CPEB4-203ENST00000517880 CALCAP01258 141 aa11.4□□□□□ -0.58
CPEB4-203ENST00000517880 CD4P01730 458 aa11.4□□□□□ -0.58
CPEB4-203ENST00000517880 HMGCRP04035 888 aa11.4□□□□□ -0.58
CPEB4-203ENST00000517880 MYBL2P10244 700 aa11.4□□□□□ -0.58
CPEB4-203ENST00000517880 PYGMP11217 842 aa11.4□□□□□ -0.58
CPEB4-203ENST00000517880 BRD2P25440 801 aaKnown RBP11.4□□□□□ -0.58
CPEB4-203ENST00000517880 PTPN11Q06124 597 aaPredicted RBP11.4□□□□□ -0.58
CPEB4-203ENST00000517880 INCA1Q0VD86 236 aa11.4□□□□□ -0.58
CPEB4-203ENST00000517880 ZNF268Q14587 947 aaPredicted RBP11.4□□□□□ -0.58
CPEB4-203ENST00000517880 SNX17Q15036 470 aa11.4□□□□□ -0.58
CPEB4-203ENST00000517880 LRRC38Q5VT99 294 aa11.4□□□□□ -0.58
CPEB4-203ENST00000517880 ALKAL1Q6UXT8 129 aa11.4□□□□□ -0.58
CPEB4-203ENST00000517880 MMS22LQ6ZRQ5 1243 aa11.4□□□□□ -0.58
CPEB4-203ENST00000517880 SND1Q7KZF4 910 aaKnown RBP eCLIP11.4□□□□□ -0.58
CPEB4-203ENST00000517880 RSPH3Q86UC2 560 aa11.4□□□□□ -0.58
CPEB4-203ENST00000517880 SLC13A5Q86YT5 568 aaPredicted RBP11.4□□□□□ -0.58
CPEB4-203ENST00000517880 PASD1Q8IV76 773 aa11.4□□□□□ -0.58
CPEB4-203ENST00000517880 GOLGA6L1Q8N7Z2 621 aa11.4□□□□□ -0.58
CPEB4-203ENST00000517880 FAM71BQ8TC56 605 aa11.4□□□□□ -0.58
CPEB4-203ENST00000517880 DNAJB3Q8WWF6 145 aa11.4□□□□□ -0.58
CPEB4-203ENST00000517880 CASKIN2Q8WXE0 1202 aa11.4□□□□□ -0.58
CPEB4-203ENST00000517880 IFT81Q8WYA0 676 aa11.4□□□□□ -0.58
CPEB4-203ENST00000517880 SNX27Q96L92 541 aa11.4□□□□□ -0.58
CPEB4-203ENST00000517880 FAM129AQ9BZQ8 928 aa11.4□□□□□ -0.58
CPEB4-203ENST00000517880 TRIM6Q9C030 488 aaPredicted RBP11.4□□□□□ -0.58
CPEB4-203ENST00000517880 DDX47Q9H0S4 455 aaKnown RBP11.4□□□□□ -0.58
CPEB4-203ENST00000517880 CNTN3Q9P232 1028 aa11.4□□□□□ -0.58
CPEB4-203ENST00000517880 POLIQ9UNA4 740 aa11.4□□□□□ -0.58
CPEB4-203ENST00000517880 DOCK3Q8IZD9 2030 aa11.39□□□□□ -0.59
CPEB4-203ENST00000517880 TMEM88BA6NKF7 163 aa11.39□□□□□ -0.59
CPEB4-203ENST00000517880 TREHO43280 583 aa11.39□□□□□ -0.59
CPEB4-203ENST00000517880 OPA1O60313 960 aa11.39□□□□□ -0.59
CPEB4-203ENST00000517880 CFHP08603 1231 aa11.39□□□□□ -0.59
CPEB4-203ENST00000517880 FAM163BP0C2L3 166 aa11.39□□□□□ -0.59
CPEB4-203ENST00000517880 ITGA4P13612 1032 aa11.39□□□□□ -0.59
CPEB4-203ENST00000517880 CD19P15391 556 aa11.39□□□□□ -0.59
CPEB4-203ENST00000517880 CYP3A5P20815 502 aa11.39□□□□□ -0.59
CPEB4-203ENST00000517880 FNTAP49354 379 aa11.39□□□□□ -0.59
CPEB4-203ENST00000517880 CARSP49589 748 aaKnown RBP11.39□□□□□ -0.59
CPEB4-203ENST00000517880 SNX16P57768 344 aa11.39□□□□□ -0.59
CPEB4-203ENST00000517880 DR1Q01658 176 aa11.39□□□□□ -0.59
CPEB4-203ENST00000517880 ZNF211Q13398 564 aaPredicted RBP11.39□□□□□ -0.59
CPEB4-203ENST00000517880 ACAP1Q15027 740 aa11.39□□□□□ -0.59
CPEB4-203ENST00000517880 ZNF394Q53GI3 561 aa11.39□□□□□ -0.59
CPEB4-203ENST00000517880 SGO2Q562F6 1265 aa11.39□□□□□ -0.59
CPEB4-203ENST00000517880 XKR4Q5GH76 650 aa11.39□□□□□ -0.59
CPEB4-203ENST00000517880 SCARA3Q6AZY7 606 aa11.39□□□□□ -0.59
CPEB4-203ENST00000517880 DNAJC24Q6P3W2 148 aa11.39□□□□□ -0.59
CPEB4-203ENST00000517880 SCARA5Q6ZMJ2 495 aa11.39□□□□□ -0.59
CPEB4-203ENST00000517880 RUFY4Q6ZNE9 571 aa11.39□□□□□ -0.59
CPEB4-203ENST00000517880 SYDE1Q6ZW31 735 aaPredicted RBP11.39□□□□□ -0.59
CPEB4-203ENST00000517880 KATNAL2Q8IYT4 538 aa11.39□□□□□ -0.59
CPEB4-203ENST00000517880 RCOR2Q8IZ40 523 aa11.39□□□□□ -0.59
CPEB4-203ENST00000517880 NIPA2Q8N8Q9 360 aa11.39□□□□□ -0.59
CPEB4-203ENST00000517880 C12orf50Q8NA57 414 aaPredicted RBP11.39□□□□□ -0.59
CPEB4-203ENST00000517880 SLC4A11Q8NBS3 891 aa11.39□□□□□ -0.59
CPEB4-203ENST00000517880 C3orf20Q8ND61 904 aa11.39□□□□□ -0.59
CPEB4-203ENST00000517880 SMC1BQ8NDV3 1235 aa11.39□□□□□ -0.59
CPEB4-203ENST00000517880 TFAP2BQ92481 460 aa11.39□□□□□ -0.59
CPEB4-203ENST00000517880 MAGOHBQ96A72 148 aaKnown RBP11.39□□□□□ -0.59
CPEB4-203ENST00000517880 LRRC45Q96CN5 670 aa11.39□□□□□ -0.59
CPEB4-203ENST00000517880 BTBD6Q96KE9 485 aa11.39□□□□□ -0.59
CPEB4-203ENST00000517880 OSMRQ99650 979 aa11.39□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 56.2 ms