RNA–Protein interactions for RNA: ENST00000515662.6

THUMPD3-210, Transcript of THUMP domain containing 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene THUMPD3, Length 2,390 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
THUMPD3-210ENST00000515662 RWDD2BP57060 319 aa16.41■□□□□ 0.22
THUMPD3-210ENST00000515662 PRKCZQ05513 592 aa16.41■□□□□ 0.22
THUMPD3-210ENST00000515662 ZBTB6Q15916 424 aa16.41■□□□□ 0.22
THUMPD3-210ENST00000515662 DENND1BQ6P3S1 775 aa16.41■□□□□ 0.22
THUMPD3-210ENST00000515662 ALKAL1Q6UXT8 129 aa16.41■□□□□ 0.22
THUMPD3-210ENST00000515662 ADAT2Q7Z6V5 191 aaKnown RBP16.41■□□□□ 0.22
THUMPD3-210ENST00000515662 TRIM6Q9C030 488 aaPredicted RBP16.41■□□□□ 0.22
THUMPD3-210ENST00000515662 CEP83Q9Y592 693 aa16.41■□□□□ 0.22
THUMPD3-210ENST00000515662 ESYT3A0FGR9 886 aa16.4■□□□□ 0.22
THUMPD3-210ENST00000515662 PGK1P00558 417 aa16.4■□□□□ 0.22
THUMPD3-210ENST00000515662 TRIM32Q13049 653 aa16.4■□□□□ 0.22
THUMPD3-210ENST00000515662 ORC1Q13415 861 aa16.4■□□□□ 0.22
THUMPD3-210ENST00000515662 SEL1L2Q5TEA6 688 aa16.4■□□□□ 0.22
THUMPD3-210ENST00000515662 TAF2Q6P1X5 1199 aa16.4■□□□□ 0.22
THUMPD3-210ENST00000515662 FEZF2Q8TBJ5 459 aa16.4■□□□□ 0.22
THUMPD3-210ENST00000515662 CASKIN2Q8WXE0 1202 aa16.4■□□□□ 0.22
THUMPD3-210ENST00000515662 TMEM176AQ96HP8 235 aa16.4■□□□□ 0.22
THUMPD3-210ENST00000515662 LHX5Q9H2C1 402 aa16.4■□□□□ 0.22
THUMPD3-210ENST00000515662 TRIP12Q14669 1992 aaPredicted RBP16.4■□□□□ 0.22
THUMPD3-210ENST00000515662 GOLGA6L10A0A0M3HER8 536 aa16.4■□□□□ 0.22
THUMPD3-210ENST00000515662 RECQL4O94761 1208 aa16.4■□□□□ 0.22
THUMPD3-210ENST00000515662 CARSP49589 748 aaKnown RBP16.4■□□□□ 0.22
THUMPD3-210ENST00000515662 PTPN11Q06124 597 aaPredicted RBP16.4■□□□□ 0.22
THUMPD3-210ENST00000515662 SMC1AQ14683 1233 aaKnown RBP16.4■□□□□ 0.22
THUMPD3-210ENST00000515662 UBXN11Q5T124 520 aa16.4■□□□□ 0.22
THUMPD3-210ENST00000515662 CXCL17Q6UXB2 119 aa16.4■□□□□ 0.22
THUMPD3-210ENST00000515662 GDAP1L1Q96MZ0 367 aa16.4■□□□□ 0.22
THUMPD3-210ENST00000515662 VIPAS39Q9H9C1 493 aa16.4■□□□□ 0.22
THUMPD3-210ENST00000515662 CNTN3Q9P232 1028 aa16.4■□□□□ 0.22
THUMPD3-210ENST00000515662 AMACRQ9UHK6 382 aa16.4■□□□□ 0.22
THUMPD3-210ENST00000515662 A0A0U1RQG5 324 aaPredicted RBP16.39■□□□□ 0.21
THUMPD3-210ENST00000515662 TCRBV5S1A1TA0A578 114 aa16.39■□□□□ 0.21
THUMPD3-210ENST00000515662 BHMG1C9JSJ3 638 aaPredicted RBP16.39■□□□□ 0.21
THUMPD3-210ENST00000515662 SEPT4O43236 478 aa16.39■□□□□ 0.21
THUMPD3-210ENST00000515662 GJB6O95452 261 aa16.39■□□□□ 0.21
THUMPD3-210ENST00000515662 HSPA6P17066 643 aa16.39■□□□□ 0.21
THUMPD3-210ENST00000515662 OAS2P29728 719 aaKnown RBP16.39■□□□□ 0.21
THUMPD3-210ENST00000515662 EPHB4P54760 987 aa16.39■□□□□ 0.21
THUMPD3-210ENST00000515662 CAP1Q01518 475 aa16.39■□□□□ 0.21
THUMPD3-210ENST00000515662 INCA1Q0VD86 236 aa16.39■□□□□ 0.21
THUMPD3-210ENST00000515662 MYO1EQ12965 1108 aa16.39■□□□□ 0.21
THUMPD3-210ENST00000515662 PPP2R5EQ16537 467 aa16.39■□□□□ 0.21
THUMPD3-210ENST00000515662 NBPF20Q3BBV1 942 aa16.39■□□□□ 0.21
THUMPD3-210ENST00000515662 CCDC26Q8TAB7 109 aa16.39■□□□□ 0.21
THUMPD3-210ENST00000515662 FAM124BQ9H5Z6 455 aaPredicted RBP16.39■□□□□ 0.21
THUMPD3-210ENST00000515662 ERVK-5Q9HDB9 667 aa16.39■□□□□ 0.21
THUMPD3-210ENST00000515662 TUBGCP4Q9UGJ1 667 aa16.39■□□□□ 0.21
THUMPD3-210ENST00000515662 PCNTO95613 3336 aa16.39■□□□□ 0.21
THUMPD3-210ENST00000515662 TLR3O15455 904 aaKnown RBP16.38■□□□□ 0.21
THUMPD3-210ENST00000515662 AKAP5P24588 427 aa16.38■□□□□ 0.21
THUMPD3-210ENST00000515662 NKX3-2P78367 333 aa16.38■□□□□ 0.21
THUMPD3-210ENST00000515662 CACNB2Q08289 660 aaPredicted RBP16.38■□□□□ 0.21
THUMPD3-210ENST00000515662 EMBQ6PCB8 327 aa16.38■□□□□ 0.21
THUMPD3-210ENST00000515662 MAATS1Q7Z4T9 603 aa16.38■□□□□ 0.21
THUMPD3-210ENST00000515662 ERICH1Q86X53 443 aa16.38■□□□□ 0.21
THUMPD3-210ENST00000515662 IFT81Q8WYA0 676 aa16.38■□□□□ 0.21
THUMPD3-210ENST00000515662 C18orf25Q96B23 403 aaPredicted RBP16.38■□□□□ 0.21
THUMPD3-210ENST00000515662 APOL6Q9BWW8 343 aa16.38■□□□□ 0.21
THUMPD3-210ENST00000515662 CELF4Q9BZC1 486 aaKnown RBP16.38■□□□□ 0.21
THUMPD3-210ENST00000515662 SPC25Q9HBM1 224 aa16.38■□□□□ 0.21
THUMPD3-210ENST00000515662 GTF2IRD1Q9UHL9 959 aa16.38■□□□□ 0.21
THUMPD3-210ENST00000515662 BARX2Q9UMQ3 279 aaPredicted RBP16.38■□□□□ 0.21
THUMPD3-210ENST00000515662 TMEM191CA6NGB0 347 aa16.38■□□□□ 0.21
THUMPD3-210ENST00000515662 AOC2O75106 756 aa16.38■□□□□ 0.21
THUMPD3-210ENST00000515662 RARBP10826 455 aa16.38■□□□□ 0.21
THUMPD3-210ENST00000515662 PAK2Q13177 524 aa16.38■□□□□ 0.21
THUMPD3-210ENST00000515662 NOGQ13253 232 aa16.38■□□□□ 0.21
THUMPD3-210ENST00000515662 TRADDQ15628 312 aa16.38■□□□□ 0.21
THUMPD3-210ENST00000515662 SND1Q7KZF4 910 aaKnown RBP eCLIP16.38■□□□□ 0.21
THUMPD3-210ENST00000515662 SLC13A5Q86YT5 568 aaPredicted RBP16.38■□□□□ 0.21
THUMPD3-210ENST00000515662 BEST2Q8NFU1 509 aa16.38■□□□□ 0.21
THUMPD3-210ENST00000515662 NFU1Q9UMS0 254 aa16.38■□□□□ 0.21
THUMPD3-210ENST00000515662 PPEF2O14830 753 aa16.37■□□□□ 0.21
THUMPD3-210ENST00000515662 MAN1A1P33908 653 aa16.37■□□□□ 0.21
THUMPD3-210ENST00000515662 NDST1P52848 882 aa16.37■□□□□ 0.21
THUMPD3-210ENST00000515662 RPL7AP62424 266 aaKnown RBP16.37■□□□□ 0.21
THUMPD3-210ENST00000515662 MRPS6P82932 125 aaKnown RBP16.37■□□□□ 0.21
THUMPD3-210ENST00000515662 GLRA4Q5JXX5 417 aa16.37■□□□□ 0.21
THUMPD3-210ENST00000515662 DNAJC24Q6P3W2 148 aa16.37■□□□□ 0.21
THUMPD3-210ENST00000515662 ZDHHC14Q8IZN3 488 aa16.37■□□□□ 0.21
THUMPD3-210ENST00000515662 TTC39CQ8N584 583 aa16.37■□□□□ 0.21
THUMPD3-210ENST00000515662 GADD45GIP1Q8TAE8 222 aaPredicted RBP16.37■□□□□ 0.21
THUMPD3-210ENST00000515662 CAVIN3Q969G5 261 aa16.37■□□□□ 0.21
THUMPD3-210ENST00000515662 IP6K2Q9UHH9 426 aa16.37■□□□□ 0.21
THUMPD3-210ENST00000515662 CYTH4Q9UIA0 394 aa16.37■□□□□ 0.21
THUMPD3-210ENST00000515662 HPCAL4Q9UM19 191 aa16.37■□□□□ 0.21
THUMPD3-210ENST00000515662 TTI1O43156 1089 aa16.37■□□□□ 0.21
THUMPD3-210ENST00000515662 PPP1R15BQ5SWA1 713 aa16.37■□□□□ 0.21
THUMPD3-210ENST00000515662 CYP4A22Q5TCH4 519 aa16.37■□□□□ 0.21
THUMPD3-210ENST00000515662 DAB2IPQ5VWQ8 1189 aa16.37■□□□□ 0.21
THUMPD3-210ENST00000515662 GDF6Q6KF10 455 aaPredicted RBP16.37■□□□□ 0.21
THUMPD3-210ENST00000515662 LRRC52Q8N7C0 313 aa16.37■□□□□ 0.21
THUMPD3-210ENST00000515662 PRELID2Q8N945 189 aa16.37■□□□□ 0.21
THUMPD3-210ENST00000515662 DDX27Q96GQ7 796 aaKnown RBP16.37■□□□□ 0.21
THUMPD3-210ENST00000515662 HEXIM2Q96MH2 286 aaKnown RBP16.37■□□□□ 0.21
THUMPD3-210ENST00000515662 RNF39Q9H2S5 420 aa16.37■□□□□ 0.21
THUMPD3-210ENST00000515662 WDR3Q9UNX4 943 aaKnown RBP eCLIP16.37■□□□□ 0.21
THUMPD3-210ENST00000515662 SBDSQ9Y3A5 250 aaKnown RBP eCLIP16.37■□□□□ 0.21
THUMPD3-210ENST00000515662 SCN10AQ9Y5Y9 1956 aa16.37■□□□□ 0.21
THUMPD3-210ENST00000515662 TCRBV7S2A1N4TA0A589 114 aa16.36■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 24.8 ms