RNA–Protein interactions for RNA: ENST00000515533.1

CDC42SE2-212, Transcript of CDC42 small effector 2, humanhuman

TSL 4

Gene CDC42SE2, Length 566 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42SE2-212ENST00000515533 PEX3P56589 373 aa9.74□□□□□ -0.85
CDC42SE2-212ENST00000515533 OSTNP61366 133 aa9.74□□□□□ -0.85
CDC42SE2-212ENST00000515533 DMP1Q13316 513 aaPredicted RBP9.74□□□□□ -0.85
CDC42SE2-212ENST00000515533 SLC44A4Q53GD3 710 aa9.74□□□□□ -0.85
CDC42SE2-212ENST00000515533 NT5DC1Q5TFE4 455 aa9.74□□□□□ -0.85
CDC42SE2-212ENST00000515533 RSPO2Q6UXX9 243 aaPredicted RBP9.74□□□□□ -0.85
CDC42SE2-212ENST00000515533 CCDC83Q8IWF9 413 aa9.74□□□□□ -0.85
CDC42SE2-212ENST00000515533 FAM184AQ8NB25 1140 aa9.74□□□□□ -0.85
CDC42SE2-212ENST00000515533 SNX29Q8TEQ0 813 aa9.74□□□□□ -0.85
CDC42SE2-212ENST00000515533 MRPL4Q9BYD3 311 aaKnown RBP9.74□□□□□ -0.85
CDC42SE2-212ENST00000515533 OSBPL6Q9BZF3 934 aa9.74□□□□□ -0.85
CDC42SE2-212ENST00000515533 POLD4Q9HCU8 107 aa9.74□□□□□ -0.85
CDC42SE2-212ENST00000515533 TIMMDC1Q9NPL8 285 aa9.74□□□□□ -0.85
CDC42SE2-212ENST00000515533 DDX19AQ9NUU7 478 aaKnown RBP9.74□□□□□ -0.85
CDC42SE2-212ENST00000515533 GDE1Q9NZC3 331 aa9.74□□□□□ -0.85
CDC42SE2-212ENST00000515533 DNMT3BQ9UBC3 853 aaKnown RBP9.74□□□□□ -0.85
CDC42SE2-212ENST00000515533 MKL2Q9ULH7 1088 aa9.74□□□□□ -0.85
CDC42SE2-212ENST00000515533 TNFSF13BQ9Y275 285 aa9.74□□□□□ -0.85
CDC42SE2-212ENST00000515533 NUB1Q9Y5A7 615 aa9.74□□□□□ -0.85
CDC42SE2-212ENST00000515533 PCDHB9Q9Y5E1 797 aa9.74□□□□□ -0.85
CDC42SE2-212ENST00000515533 COL4A2P08572 1712 aa9.73□□□□□ -0.85
CDC42SE2-212ENST00000515533 SCN1AP35498 2009 aa9.73□□□□□ -0.85
CDC42SE2-212ENST00000515533 SMIM28A0A1B0GU29 152 aa9.73□□□□□ -0.85
CDC42SE2-212ENST00000515533 FAM170BA6NMN3 283 aa9.73□□□□□ -0.85
CDC42SE2-212ENST00000515533 NCAM2O15394 837 aa9.73□□□□□ -0.85
CDC42SE2-212ENST00000515533 THBS1P07996 1170 aa9.73□□□□□ -0.85
CDC42SE2-212ENST00000515533 RHOP08100 348 aa9.73□□□□□ -0.85
CDC42SE2-212ENST00000515533 PTPN2P17706 415 aa9.73□□□□□ -0.85
CDC42SE2-212ENST00000515533 COL8A1P27658 744 aa9.73□□□□□ -0.85
CDC42SE2-212ENST00000515533 BRCC3P46736 316 aa9.73□□□□□ -0.85
CDC42SE2-212ENST00000515533 ARPP19P56211 112 aa9.73□□□□□ -0.85
CDC42SE2-212ENST00000515533 HMGN5P82970 282 aaKnown RBP9.73□□□□□ -0.85
CDC42SE2-212ENST00000515533 ROR1Q01973 937 aa9.73□□□□□ -0.85
CDC42SE2-212ENST00000515533 ST3GAL1Q11201 340 aa9.73□□□□□ -0.85
CDC42SE2-212ENST00000515533 ZNF528Q3MIS6 628 aa9.73□□□□□ -0.85
CDC42SE2-212ENST00000515533 ZBTB41Q5SVQ8 909 aa9.73□□□□□ -0.85
CDC42SE2-212ENST00000515533 TPRG1Q6ZUI0 275 aa9.73□□□□□ -0.85
CDC42SE2-212ENST00000515533 ELMOD1Q8N336 334 aa9.73□□□□□ -0.85
CDC42SE2-212ENST00000515533 Q8N3U1 123 aa9.73□□□□□ -0.85
CDC42SE2-212ENST00000515533 CEP120Q8N960 986 aa9.73□□□□□ -0.85
CDC42SE2-212ENST00000515533 C3orf58Q8NDZ4 430 aa9.73□□□□□ -0.85
CDC42SE2-212ENST00000515533 FBXO18Q8NFZ0 1043 aa9.73□□□□□ -0.85
CDC42SE2-212ENST00000515533 ZNF461Q8TAF7 563 aa9.73□□□□□ -0.85
CDC42SE2-212ENST00000515533 MCRS1Q96EZ8 462 aa9.73□□□□□ -0.85
CDC42SE2-212ENST00000515533 DRC1Q96MC2 740 aa9.73□□□□□ -0.85
CDC42SE2-212ENST00000515533 NELL2Q99435 816 aa9.73□□□□□ -0.85
CDC42SE2-212ENST00000515533 LLPHQ9BRT6 129 aaKnown RBP9.73□□□□□ -0.85
CDC42SE2-212ENST00000515533 TCHPQ9BT92 498 aa9.73□□□□□ -0.85
CDC42SE2-212ENST00000515533 DDX23Q9BUQ8 820 aaKnown RBP9.73□□□□□ -0.85
CDC42SE2-212ENST00000515533 CDT1Q9H211 546 aa9.73□□□□□ -0.85
CDC42SE2-212ENST00000515533 LTB4R2Q9NPC1 389 aa9.73□□□□□ -0.85
CDC42SE2-212ENST00000515533 KMT5AQ9NQR1 393 aa9.73□□□□□ -0.85
CDC42SE2-212ENST00000515533 FBXO4Q9UKT5 387 aa9.73□□□□□ -0.85
CDC42SE2-212ENST00000515533 LIMCH1Q9UPQ0 1083 aa9.73□□□□□ -0.85
CDC42SE2-212ENST00000515533 DNM3Q9UQ16 869 aa9.73□□□□□ -0.85
CDC42SE2-212ENST00000515533 MRPS17Q9Y2R5 130 aaKnown RBP9.73□□□□□ -0.85
CDC42SE2-212ENST00000515533 CACNA1BQ00975 2339 aa9.73□□□□□ -0.85
CDC42SE2-212ENST00000515533 SDK1Q7Z5N4 2213 aa9.72□□□□□ -0.85
CDC42SE2-212ENST00000515533 NCOR2Q9Y618 2525 aa9.72□□□□□ -0.85
CDC42SE2-212ENST00000515533 ARHGEF37A1IGU5 675 aa9.72□□□□□ -0.85
CDC42SE2-212ENST00000515533 WDR27A2RRH5 827 aa9.72□□□□□ -0.85
CDC42SE2-212ENST00000515533 H7C4K7 107 aa9.72□□□□□ -0.85
CDC42SE2-212ENST00000515533 PODXLO00592 558 aa9.72□□□□□ -0.85
CDC42SE2-212ENST00000515533 SYN3O14994 580 aa9.72□□□□□ -0.85
CDC42SE2-212ENST00000515533 ECI2O75521 394 aa9.72□□□□□ -0.85
CDC42SE2-212ENST00000515533 HARSP12081 509 aaKnown RBP9.72□□□□□ -0.85
CDC42SE2-212ENST00000515533 ATF2P15336 505 aa9.72□□□□□ -0.85
CDC42SE2-212ENST00000515533 CD72P21854 359 aa9.72□□□□□ -0.85
CDC42SE2-212ENST00000515533 MCM4P33991 863 aa9.72□□□□□ -0.85
CDC42SE2-212ENST00000515533 NPTX2P47972 431 aa9.72□□□□□ -0.85
CDC42SE2-212ENST00000515533 CSTF1Q05048 431 aaKnown RBP9.72□□□□□ -0.85
CDC42SE2-212ENST00000515533 SOX4Q06945 474 aaPredicted RBP9.72□□□□□ -0.85
CDC42SE2-212ENST00000515533 PDIA5Q14554 519 aa9.72□□□□□ -0.85
CDC42SE2-212ENST00000515533 ECM1Q16610 540 aa9.72□□□□□ -0.85
CDC42SE2-212ENST00000515533 SLC5A9Q2M3M2 681 aa9.72□□□□□ -0.85
CDC42SE2-212ENST00000515533 KRT79Q5XKE5 535 aa9.72□□□□□ -0.85
CDC42SE2-212ENST00000515533 IQCEQ6IPM2 695 aa9.72□□□□□ -0.85
CDC42SE2-212ENST00000515533 SLC8B1Q6J4K2 584 aa9.72□□□□□ -0.85
CDC42SE2-212ENST00000515533 ZNF852Q6ZMS4 543 aa9.72□□□□□ -0.85
CDC42SE2-212ENST00000515533 C1orf229Q6ZS94 237 aaPredicted RBP9.72□□□□□ -0.85
CDC42SE2-212ENST00000515533 PDZD4Q76G19 769 aaPredicted RBP9.72□□□□□ -0.85
CDC42SE2-212ENST00000515533 TAS1R3Q7RTX0 852 aa9.72□□□□□ -0.85
CDC42SE2-212ENST00000515533 DGLUCYQ7Z3D6 616 aa9.72□□□□□ -0.85
CDC42SE2-212ENST00000515533 CYP2U1Q7Z449 544 aa9.72□□□□□ -0.85
CDC42SE2-212ENST00000515533 ATRIPQ8WXE1 791 aa9.72□□□□□ -0.85
CDC42SE2-212ENST00000515533 RMDN1Q96DB5 314 aa9.72□□□□□ -0.85
CDC42SE2-212ENST00000515533 BORCS6Q96GS4 357 aa9.72□□□□□ -0.85
CDC42SE2-212ENST00000515533 ACAP3Q96P50 834 aa9.72□□□□□ -0.85
CDC42SE2-212ENST00000515533 ACO2Q99798 780 aaKnown RBP9.72□□□□□ -0.85
CDC42SE2-212ENST00000515533 CORO1BQ9BR76 489 aa9.72□□□□□ -0.85
CDC42SE2-212ENST00000515533 CYP4F11Q9HBI6 524 aa9.72□□□□□ -0.85
CDC42SE2-212ENST00000515533 AVENQ9NQS1 362 aaPredicted RBP9.72□□□□□ -0.85
CDC42SE2-212ENST00000515533 NCDNQ9UBB6 729 aa9.72□□□□□ -0.85
CDC42SE2-212ENST00000515533 RBM19Q9Y4C8 960 aaKnown RBP9.72□□□□□ -0.85
CDC42SE2-212ENST00000515533 PCDHGA2Q9Y5H1 932 aa9.72□□□□□ -0.85
CDC42SE2-212ENST00000515533 TSC2P49815 1807 aa9.72□□□□□ -0.85
CDC42SE2-212ENST00000515533 OBSL1O75147 1896 aa9.72□□□□□ -0.85
CDC42SE2-212ENST00000515533 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP9.71□□□□□ -0.86
CDC42SE2-212ENST00000515533 E9PMD0 336 aa9.71□□□□□ -0.86
CDC42SE2-212ENST00000515533 ZNF197O14709 1029 aa9.71□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 41.1 ms