RNA–Protein interactions for RNA: ENST00000514469.1

HMGXB3-205, Transcript of HMG-box containing 3, humanhuman

TSL 5

Gene HMGXB3, Length 975 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGXB3-205ENST00000514469 EPHB3P54753 998 aa11.28□□□□□ -0.6
HMGXB3-205ENST00000514469 PRKCQQ04759 706 aa11.28□□□□□ -0.6
HMGXB3-205ENST00000514469 MLF2Q15773 248 aaPredicted RBP11.28□□□□□ -0.6
HMGXB3-205ENST00000514469 FAM78AQ5JUQ0 283 aa11.28□□□□□ -0.6
HMGXB3-205ENST00000514469 FAM26FQ5R3K3 315 aa11.28□□□□□ -0.6
HMGXB3-205ENST00000514469 WSCD1Q658N2 575 aa11.28□□□□□ -0.6
HMGXB3-205ENST00000514469 UNC13DQ70J99 1090 aa11.28□□□□□ -0.6
HMGXB3-205ENST00000514469 METTL23Q86XA0 190 aa11.28□□□□□ -0.6
HMGXB3-205ENST00000514469 LRRC52Q8N7C0 313 aa11.28□□□□□ -0.6
HMGXB3-205ENST00000514469 ATAD1Q8NBU5 361 aa11.28□□□□□ -0.6
HMGXB3-205ENST00000514469 SHKBP1Q8TBC3 707 aa11.28□□□□□ -0.6
HMGXB3-205ENST00000514469 C2orf15Q8WU43 125 aaKnown RBP11.28□□□□□ -0.6
HMGXB3-205ENST00000514469 CACTINQ8WUQ7 758 aaKnown RBP11.28□□□□□ -0.6
HMGXB3-205ENST00000514469 SMARCD2Q92925 531 aa11.28□□□□□ -0.6
HMGXB3-205ENST00000514469 PSMG2Q969U7 264 aa11.28□□□□□ -0.6
HMGXB3-205ENST00000514469 FAM84AQ96KN4 292 aa11.28□□□□□ -0.6
HMGXB3-205ENST00000514469 ZSWIM3Q96MP5 696 aa11.28□□□□□ -0.6
HMGXB3-205ENST00000514469 FOXQ1Q9C009 403 aa11.28□□□□□ -0.6
HMGXB3-205ENST00000514469 TRPV4Q9HBA0 871 aa11.28□□□□□ -0.6
HMGXB3-205ENST00000514469 SLC27A5Q9Y2P5 690 aa11.28□□□□□ -0.6
HMGXB3-205ENST00000514469 ASB3Q9Y575 518 aa11.28□□□□□ -0.6
HMGXB3-205ENST00000514469 PTPRJQ12913 1337 aa11.28□□□□□ -0.6
HMGXB3-205ENST00000514469 VPS13AQ96RL7 3174 aa11.27□□□□□ -0.6
HMGXB3-205ENST00000514469 STK25O00506 426 aa11.27□□□□□ -0.61
HMGXB3-205ENST00000514469 SOAT2O75908 522 aa11.27□□□□□ -0.61
HMGXB3-205ENST00000514469 GJA1P17302 382 aa11.27□□□□□ -0.61
HMGXB3-205ENST00000514469 ATF6P18850 670 aa11.27□□□□□ -0.61
HMGXB3-205ENST00000514469 DNM1Q05193 864 aaKnown RBP11.27□□□□□ -0.61
HMGXB3-205ENST00000514469 SMARCB1Q12824 385 aa11.27□□□□□ -0.61
HMGXB3-205ENST00000514469 SNW1Q13573 536 aaKnown RBP11.27□□□□□ -0.61
HMGXB3-205ENST00000514469 ANGPT1Q15389 498 aa11.27□□□□□ -0.61
HMGXB3-205ENST00000514469 TEAD2Q15562 447 aa11.27□□□□□ -0.61
HMGXB3-205ENST00000514469 SLC44A4Q53GD3 710 aa11.27□□□□□ -0.61
HMGXB3-205ENST00000514469 THEM5Q8N1Q8 247 aa11.27□□□□□ -0.61
HMGXB3-205ENST00000514469 SPRYD3Q8NCJ5 442 aa11.27□□□□□ -0.61
HMGXB3-205ENST00000514469 ZNF507Q8TCN5 953 aa11.27□□□□□ -0.61
HMGXB3-205ENST00000514469 DNASE1L2Q92874 299 aa11.27□□□□□ -0.61
HMGXB3-205ENST00000514469 SHDQ96IW2 340 aa11.27□□□□□ -0.61
HMGXB3-205ENST00000514469 MTMR12Q9C0I1 747 aa11.27□□□□□ -0.61
HMGXB3-205ENST00000514469 ZFP14Q9HCL3 533 aa11.27□□□□□ -0.61
HMGXB3-205ENST00000514469 PDE11AQ9HCR9 933 aa11.27□□□□□ -0.61
HMGXB3-205ENST00000514469 ZNF334Q9HCZ1 680 aaPredicted RBP11.27□□□□□ -0.61
HMGXB3-205ENST00000514469 AGPAT3Q9NRZ7 376 aa11.27□□□□□ -0.61
HMGXB3-205ENST00000514469 FAM13BQ9NYF5 915 aa11.27□□□□□ -0.61
HMGXB3-205ENST00000514469 HSPBP1Q9NZL4 362 aa11.27□□□□□ -0.61
HMGXB3-205ENST00000514469 SIX4Q9UIU6 781 aa11.27□□□□□ -0.61
HMGXB3-205ENST00000514469 RCOR1Q9UKL0 485 aa11.27□□□□□ -0.61
HMGXB3-205ENST00000514469 CFAP45Q9UL16 551 aa11.27□□□□□ -0.61
HMGXB3-205ENST00000514469 L1RE1Q9UN81 338 aa11.27□□□□□ -0.61
HMGXB3-205ENST00000514469 AGAP1Q9UPQ3 857 aa11.27□□□□□ -0.61
HMGXB3-205ENST00000514469 SIT1Q9Y3P8 196 aa11.27□□□□□ -0.61
HMGXB3-205ENST00000514469 GTF3C3Q9Y5Q9 886 aa11.27□□□□□ -0.61
HMGXB3-205ENST00000514469 NCANO14594 1321 aa11.27□□□□□ -0.61
HMGXB3-205ENST00000514469 DOCK6Q96HP0 2047 aa11.26□□□□□ -0.61
HMGXB3-205ENST00000514469 A0A1W2PRU2 124 aa11.26□□□□□ -0.61
HMGXB3-205ENST00000514469 KANSL1LA0AUZ9 987 aa11.26□□□□□ -0.61
HMGXB3-205ENST00000514469 TGFB1I1O43294 461 aa11.26□□□□□ -0.61
HMGXB3-205ENST00000514469 FGF19O95750 216 aa11.26□□□□□ -0.61
HMGXB3-205ENST00000514469 DCNP07585 359 aaKnown RBP11.26□□□□□ -0.61
HMGXB3-205ENST00000514469 TMEM191BP0C7N4 346 aa11.26□□□□□ -0.61
HMGXB3-205ENST00000514469 GLULP15104 373 aa11.26□□□□□ -0.61
HMGXB3-205ENST00000514469 CASP1P29466 404 aa11.26□□□□□ -0.61
HMGXB3-205ENST00000514469 TUFMP49411 452 aaKnown RBP11.26□□□□□ -0.61
HMGXB3-205ENST00000514469 GRM2Q14416 872 aa11.26□□□□□ -0.61
HMGXB3-205ENST00000514469 BMT2Q1RMZ1 405 aa11.26□□□□□ -0.61
HMGXB3-205ENST00000514469 LMBRD2Q68DH5 695 aaPredicted RBP11.26□□□□□ -0.61
HMGXB3-205ENST00000514469 SCARA3Q6AZY7 606 aa11.26□□□□□ -0.61
HMGXB3-205ENST00000514469 VITQ6UXI7 678 aa11.26□□□□□ -0.61
HMGXB3-205ENST00000514469 ITIH5Q86UX2 942 aa11.26□□□□□ -0.61
HMGXB3-205ENST00000514469 LRRTM3Q86VH5 581 aa11.26□□□□□ -0.61
HMGXB3-205ENST00000514469 CBWD2Q8IUF1 395 aa11.26□□□□□ -0.61
HMGXB3-205ENST00000514469 DCP1BQ8IZD4 617 aaKnown RBP11.26□□□□□ -0.61
HMGXB3-205ENST00000514469 TMEM86AQ8N2M4 240 aa11.26□□□□□ -0.61
HMGXB3-205ENST00000514469 PDCL2Q8N4E4 241 aa11.26□□□□□ -0.61
HMGXB3-205ENST00000514469 ZSCAN18Q8TBC5 510 aaPredicted RBP11.26□□□□□ -0.61
HMGXB3-205ENST00000514469 SPATA18Q8TC71 538 aa11.26□□□□□ -0.61
HMGXB3-205ENST00000514469 SPPL2BQ8TCT7 592 aa11.26□□□□□ -0.61
HMGXB3-205ENST00000514469 NOC3LQ8WTT2 800 aaKnown RBP11.26□□□□□ -0.61
HMGXB3-205ENST00000514469 DEPDC1BQ8WUY9 529 aa11.26□□□□□ -0.61
HMGXB3-205ENST00000514469 LEO1Q8WVC0 666 aaPredicted RBP11.26□□□□□ -0.61
HMGXB3-205ENST00000514469 SCFD1Q8WVM8 642 aa11.26□□□□□ -0.61
HMGXB3-205ENST00000514469 ANKRD36BP1Q96IX9 119 aa11.26□□□□□ -0.61
HMGXB3-205ENST00000514469 SEPT5Q99719 369 aaPredicted RBP11.26□□□□□ -0.61
HMGXB3-205ENST00000514469 LPIN3Q9BQK8 851 aa11.26□□□□□ -0.61
HMGXB3-205ENST00000514469 MKNK1Q9BUB5 465 aa11.26□□□□□ -0.61
HMGXB3-205ENST00000514469 OSBPL6Q9BZF3 934 aa11.26□□□□□ -0.61
HMGXB3-205ENST00000514469 GPR88Q9GZN0 384 aa11.26□□□□□ -0.61
HMGXB3-205ENST00000514469 BLZF1Q9H2G9 400 aa11.26□□□□□ -0.61
HMGXB3-205ENST00000514469 KIAA1586Q9HCI6 787 aa11.26□□□□□ -0.61
HMGXB3-205ENST00000514469 INTS13Q9NVM9 706 aa11.26□□□□□ -0.61
HMGXB3-205ENST00000514469 GDAP2Q9NXN4 497 aa11.26□□□□□ -0.61
HMGXB3-205ENST00000514469 SCN1AP35498 2009 aa11.26□□□□□ -0.61
HMGXB3-205ENST00000514469 PVALEFA0A1B0GWK0 134 aa11.25□□□□□ -0.61
HMGXB3-205ENST00000514469 ZNF233A6NK53 670 aa11.25□□□□□ -0.61
HMGXB3-205ENST00000514469 SHISA7A6NL88 538 aa11.25□□□□□ -0.61
HMGXB3-205ENST00000514469 ACTN4O43707 911 aaKnown RBP11.25□□□□□ -0.61
HMGXB3-205ENST00000514469 GFRA3O60609 400 aa11.25□□□□□ -0.61
HMGXB3-205ENST00000514469 HAPLN1P10915 354 aaPredicted RBP11.25□□□□□ -0.61
HMGXB3-205ENST00000514469 PSMC3P17980 439 aa11.25□□□□□ -0.61
HMGXB3-205ENST00000514469 SNRPFP62306 86 aaKnown RBP11.25□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 67.8 ms