RNA–Protein interactions for RNA: ENST00000513206.5

TRIO-221, Transcript of trio Rho guanine nucleotide exchange factor, humanhuman

TSL 5

Gene TRIO, Length 7,995 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIO-221ENST00000513206 ARRDC4Q8NCT1 418 aa16.84■□□□□ 0.29
TRIO-221ENST00000513206 ZNF473Q8WTR7 871 aaKnown RBP16.84■□□□□ 0.29
TRIO-221ENST00000513206 TSPAN17Q96FV3 270 aa16.84■□□□□ 0.29
TRIO-221ENST00000513206 DDX47Q9H0S4 455 aaKnown RBP16.84■□□□□ 0.29
TRIO-221ENST00000513206 ETNK1Q9HBU6 452 aa16.84■□□□□ 0.29
TRIO-221ENST00000513206 KCNH7Q9NS40 1196 aa16.84■□□□□ 0.29
TRIO-221ENST00000513206 CNTNAP4Q9C0A0 1308 aa16.83■□□□□ 0.29
TRIO-221ENST00000513206 USP42Q9H9J4 1324 aaKnown RBP16.83■□□□□ 0.29
TRIO-221ENST00000513206 RPS6P62753 249 aaKnown RBP16.83■□□□□ 0.29
TRIO-221ENST00000513206 RUBCNQ92622 972 aa16.83■□□□□ 0.29
TRIO-221ENST00000513206 TMEM8AQ9HCN3 771 aa16.83■□□□□ 0.29
TRIO-221ENST00000513206 CDH18Q13634 790 aa16.83■□□□□ 0.29
TRIO-221ENST00000513206 MAPRE1Q15691 268 aaKnown RBP16.83■□□□□ 0.29
TRIO-221ENST00000513206 SPATA16Q9BXB7 569 aa16.83■□□□□ 0.29
TRIO-221ENST00000513206 TRIM48Q8IWZ4 208 aa16.83■□□□□ 0.29
TRIO-221ENST00000513206 PHF20Q9BVI0 1012 aa16.83■□□□□ 0.29
TRIO-221ENST00000513206 DYNC1LI1Q9Y6G9 523 aaKnown RBP16.83■□□□□ 0.29
TRIO-221ENST00000513206 KRT87PA6NCN2 255 aa16.83■□□□□ 0.28
TRIO-221ENST00000513206 ITGB3P05106 788 aa16.83■□□□□ 0.28
TRIO-221ENST00000513206 KRT72Q14CN4 511 aa16.83■□□□□ 0.28
TRIO-221ENST00000513206 RGS9BPQ6ZS82 235 aa16.83■□□□□ 0.28
TRIO-221ENST00000513206 IFT172Q9UG01 1749 aa16.83■□□□□ 0.28
TRIO-221ENST00000513206 DDHD2O94830 711 aa16.83■□□□□ 0.28
TRIO-221ENST00000513206 SGSM3Q96HU1 749 aa16.83■□□□□ 0.28
TRIO-221ENST00000513206 KCNF1Q9H3M0 494 aa16.83■□□□□ 0.28
TRIO-221ENST00000513206 SLC40A1Q9NP59 571 aa16.83■□□□□ 0.28
TRIO-221ENST00000513206 SLC30A1Q9Y6M5 507 aa16.83■□□□□ 0.28
TRIO-221ENST00000513206 ADGRA2Q96PE1 1338 aa16.83■□□□□ 0.28
TRIO-221ENST00000513206 GOLGA8RI6L899 631 aa16.83■□□□□ 0.28
TRIO-221ENST00000513206 EFCAB14O75071 495 aa16.83■□□□□ 0.28
TRIO-221ENST00000513206 ELMO2Q96JJ3 720 aa16.83■□□□□ 0.28
TRIO-221ENST00000513206 ZNF512BQ96KM6 892 aaPredicted RBP16.83■□□□□ 0.28
TRIO-221ENST00000513206 WDCPQ9H6R7 721 aa16.83■□□□□ 0.28
TRIO-221ENST00000513206 ARHGEF38Q9NXL2 777 aa16.83■□□□□ 0.28
TRIO-221ENST00000513206 NDE1Q9NXR1 346 aa16.83■□□□□ 0.28
TRIO-221ENST00000513206 NYAP2Q9P242 653 aa16.83■□□□□ 0.28
TRIO-221ENST00000513206 REREQ9P2R6 1566 aa16.83■□□□□ 0.28
TRIO-221ENST00000513206 TMEM132BQ14DG7 1078 aa16.83■□□□□ 0.28
TRIO-221ENST00000513206 ARMC6Q6NXE6 501 aa16.83■□□□□ 0.28
TRIO-221ENST00000513206 ANO5Q75V66 913 aa16.83■□□□□ 0.28
TRIO-221ENST00000513206 USP33Q8TEY7 942 aa16.83■□□□□ 0.28
TRIO-221ENST00000513206 RMI1Q9H9A7 625 aa16.83■□□□□ 0.28
TRIO-221ENST00000513206 TBX3O15119 743 aa16.82■□□□□ 0.28
TRIO-221ENST00000513206 EIF3DO15371 548 aaKnown RBP eCLIP16.82■□□□□ 0.284e-7■■□□□ 13.2
TRIO-221ENST00000513206 FLOT2Q14254 428 aa16.82■□□□□ 0.28
TRIO-221ENST00000513206 GJC2Q5T442 439 aaPredicted RBP16.82■□□□□ 0.28
TRIO-221ENST00000513206 LRRC8EQ6NSJ5 796 aa16.82■□□□□ 0.28
TRIO-221ENST00000513206 ATL2Q8NHH9 583 aa16.82■□□□□ 0.28
TRIO-221ENST00000513206 ATP6V1G3Q96LB4 118 aa16.82■□□□□ 0.28
TRIO-221ENST00000513206 EPC1Q9H2F5 836 aa16.82■□□□□ 0.28
TRIO-221ENST00000513206 A0A1W2PQC6 194 aa16.82■□□□□ 0.28
TRIO-221ENST00000513206 BRAFP15056 766 aa16.82■□□□□ 0.28
TRIO-221ENST00000513206 FGFR4P22455 802 aa16.82■□□□□ 0.28
TRIO-221ENST00000513206 UBA3Q8TBC4 463 aa16.82■□□□□ 0.28
TRIO-221ENST00000513206 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP16.82■□□□□ 0.289e-7■■■■■ 28.8
TRIO-221ENST00000513206 TEX33O43247 280 aa16.82■□□□□ 0.28
TRIO-221ENST00000513206 DCP1BQ8IZD4 617 aaKnown RBP16.82■□□□□ 0.28
TRIO-221ENST00000513206 B4GALNT2Q8NHY0 566 aa16.82■□□□□ 0.28
TRIO-221ENST00000513206 PI4K2AQ9BTU6 479 aa16.82■□□□□ 0.28
TRIO-221ENST00000513206 CYP4F11Q9HBI6 524 aa16.82■□□□□ 0.28
TRIO-221ENST00000513206 DPP3Q9NY33 737 aa16.82■□□□□ 0.28
TRIO-221ENST00000513206 CCDC78A2IDD5 438 aa16.82■□□□□ 0.28
TRIO-221ENST00000513206 FAM187AA6NFU0 413 aa16.82■□□□□ 0.28
TRIO-221ENST00000513206 COLEC11Q9BWP8 271 aa16.82■□□□□ 0.28
TRIO-221ENST00000513206 FBXO2Q9UK22 296 aaPredicted RBP16.82■□□□□ 0.28
TRIO-221ENST00000513206 GUCY1A3Q02108 690 aa16.82■□□□□ 0.28
TRIO-221ENST00000513206 POLD3Q15054 466 aaPredicted RBP16.82■□□□□ 0.28
TRIO-221ENST00000513206 CCDC90BQ9GZT6 254 aa16.82■□□□□ 0.28
TRIO-221ENST00000513206 GTPBP10A4D1E9 387 aaKnown RBP16.82■□□□□ 0.28
TRIO-221ENST00000513206 PPP1R37O75864 691 aa16.82■□□□□ 0.28
TRIO-221ENST00000513206 TMEM117Q9H0C3 514 aa16.82■□□□□ 0.28
TRIO-221ENST00000513206 AKAP12Q02952 1782 aa16.81■□□□□ 0.28
TRIO-221ENST00000513206 ICAM1P05362 532 aa16.81■□□□□ 0.28
TRIO-221ENST00000513206 HLA-DPA1P20036 260 aa16.81■□□□□ 0.28
TRIO-221ENST00000513206 SERPINB3P29508 390 aa16.81■□□□□ 0.28
TRIO-221ENST00000513206 RBBP8NLQ8NC74 664 aaPredicted RBP16.81■□□□□ 0.28
TRIO-221ENST00000513206 SLC16A10Q8TF71 515 aa16.81■□□□□ 0.28
TRIO-221ENST00000513206 AMACRQ9UHK6 382 aa16.81■□□□□ 0.28
TRIO-221ENST00000513206 USP31Q70CQ4 1352 aa16.81■□□□□ 0.28
TRIO-221ENST00000513206 UBE2Q2LH0YL09 131 aa16.81■□□□□ 0.28
TRIO-221ENST00000513206 ETFBP38117 255 aa16.81■□□□□ 0.28
TRIO-221ENST00000513206 WDR48Q8TAF3 677 aa16.81■□□□□ 0.28
TRIO-221ENST00000513206 TRAF3IP3Q9Y228 551 aa16.81■□□□□ 0.28
TRIO-221ENST00000513206 RNF103-CHMP3A0A140T963 221 aa16.81■□□□□ 0.28
TRIO-221ENST00000513206 ZC3H11AO75152 810 aaKnown RBP eCLIP16.81■□□□□ 0.28
TRIO-221ENST00000513206 YY1P25490 414 aa16.81■□□□□ 0.28
TRIO-221ENST00000513206 SYDE1Q6ZW31 735 aaPredicted RBP16.81■□□□□ 0.28
TRIO-221ENST00000513206 FBXO33Q7Z6M2 555 aa16.81■□□□□ 0.28
TRIO-221ENST00000513206 SNX31Q8N9S9 440 aa16.81■□□□□ 0.28
TRIO-221ENST00000513206 SHCBP1Q8NEM2 672 aa16.81■□□□□ 0.28
TRIO-221ENST00000513206 RGS4P49798 205 aa16.81■□□□□ 0.28
TRIO-221ENST00000513206 CCDC157Q569K6 752 aa16.81■□□□□ 0.28
TRIO-221ENST00000513206 XRRA1Q6P2D8 792 aa16.81■□□□□ 0.28
TRIO-221ENST00000513206 C20orf96Q9NUD7 363 aaPredicted RBP16.81■□□□□ 0.28
TRIO-221ENST00000513206 TTLL13PA6NNM8 815 aa16.81■□□□□ 0.28
TRIO-221ENST00000513206 SUPT3HO75486 399 aa16.81■□□□□ 0.28
TRIO-221ENST00000513206 TRADDQ15628 312 aa16.81■□□□□ 0.28
TRIO-221ENST00000513206 KIZQ2M2Z5 673 aa16.81■□□□□ 0.28
TRIO-221ENST00000513206 CYP4A22Q5TCH4 519 aa16.81■□□□□ 0.28
TRIO-221ENST00000513206 LZTS1Q9Y250 596 aa16.81■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 18.4 ms