RNA–Protein interactions for RNA: ENST00000512392.5

CHD1-208, Transcript of chromodomain helicase DNA binding protein 1, humanhuman

TSL 2

Gene CHD1, Length 1,968 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD1-208ENST00000512392 H1FNTQ75WM6 255 aaPredicted RBP6.76□□□□□ -1.33
CHD1-208ENST00000512392 NLRP10Q86W26 655 aa6.76□□□□□ -1.33
CHD1-208ENST00000512392 THNSL1Q8IYQ7 743 aa6.76□□□□□ -1.33
CHD1-208ENST00000512392 AGGF1Q8N302 714 aaeCLIP6.76□□□□□ -1.33
CHD1-208ENST00000512392 RNF139Q8WU17 664 aa6.76□□□□□ -1.33
CHD1-208ENST00000512392 CTNNBL1Q8WYA6 563 aaPredicted RBP6.76□□□□□ -1.33
CHD1-208ENST00000512392 KAT5Q92993 513 aa6.76□□□□□ -1.33
CHD1-208ENST00000512392 TEKT1Q969V4 418 aa6.76□□□□□ -1.33
CHD1-208ENST00000512392 FEM1CQ96JP0 617 aa6.76□□□□□ -1.33
CHD1-208ENST00000512392 ACAP3Q96P50 834 aa6.76□□□□□ -1.33
CHD1-208ENST00000512392 UIMC1Q96RL1 719 aa6.76□□□□□ -1.33
CHD1-208ENST00000512392 TWNKQ96RR1 684 aa6.76□□□□□ -1.33
CHD1-208ENST00000512392 ZPBPQ9BS86 351 aa6.76□□□□□ -1.33
CHD1-208ENST00000512392 GPRC5CQ9NQ84 441 aa6.76□□□□□ -1.33
CHD1-208ENST00000512392 KRT82Q9NSB4 513 aa6.76□□□□□ -1.33
CHD1-208ENST00000512392 COL20A1Q9P218 1284 aa6.76□□□□□ -1.33
CHD1-208ENST00000512392 PTBP2Q9UKA9 531 aaKnown RBP6.76□□□□□ -1.33
CHD1-208ENST00000512392 ARPC4-TTLL3A0A0A6YYG9 625 aa6.75□□□□□ -1.33
CHD1-208ENST00000512392 H7C1D1 291 aa6.75□□□□□ -1.33
CHD1-208ENST00000512392 KCNK3O14649 394 aa6.75□□□□□ -1.33
CHD1-208ENST00000512392 ASNA1O43681 348 aa6.75□□□□□ -1.33
CHD1-208ENST00000512392 IGHA1P01876 353 aa6.75□□□□□ -1.33
CHD1-208ENST00000512392 AFPP02771 609 aaKnown RBP6.75□□□□□ -1.33
CHD1-208ENST00000512392 FTLP02792 175 aaPredicted RBP6.75□□□□□ -1.33
CHD1-208ENST00000512392 CTSBP07858 339 aa6.75□□□□□ -1.33
CHD1-208ENST00000512392 LAG3P18627 525 aa6.75□□□□□ -1.33
CHD1-208ENST00000512392 TGM1P22735 817 aa6.75□□□□□ -1.33
CHD1-208ENST00000512392 SLC7A1P30825 629 aa6.75□□□□□ -1.33
CHD1-208ENST00000512392 MATR3P43243 847 aaKnown RBP eCLIP6.75□□□□□ -1.33
CHD1-208ENST00000512392 HNRNPUQ00839 825 aaKnown RBP eCLIP6.75□□□□□ -1.33
CHD1-208ENST00000512392 ANKRD34AQ69YU3 496 aa6.75□□□□□ -1.33
CHD1-208ENST00000512392 CAVIN1Q6NZI2 390 aaKnown RBP6.75□□□□□ -1.33
CHD1-208ENST00000512392 RUFY3Q7L099 469 aa6.75□□□□□ -1.33
CHD1-208ENST00000512392 CPLX4Q7Z7G2 160 aa6.75□□□□□ -1.33
CHD1-208ENST00000512392 CDH24Q86UP0 819 aa6.75□□□□□ -1.33
CHD1-208ENST00000512392 TAGAPQ8N103 731 aa6.75□□□□□ -1.33
CHD1-208ENST00000512392 C17orf53Q8N3J3 647 aaPredicted RBP6.75□□□□□ -1.33
CHD1-208ENST00000512392 CELF5Q8N6W0 485 aaKnown RBP6.75□□□□□ -1.33
CHD1-208ENST00000512392 SMG8Q8ND04 991 aaKnown RBP6.75□□□□□ -1.33
CHD1-208ENST00000512392 KIAA1524Q8TCG1 905 aa6.75□□□□□ -1.33
CHD1-208ENST00000512392 FAM81BQ96LP2 452 aa6.75□□□□□ -1.33
CHD1-208ENST00000512392 DPH2Q9BQC3 489 aaPredicted RBP6.75□□□□□ -1.33
CHD1-208ENST00000512392 METTL22Q9BUU2 404 aaPredicted RBP6.75□□□□□ -1.33
CHD1-208ENST00000512392 CEP41Q9BYV8 373 aa6.75□□□□□ -1.33
CHD1-208ENST00000512392 FTOQ9C0B1 505 aaKnown RBP eCLIP6.75□□□□□ -1.33
CHD1-208ENST00000512392 AP5M1Q9H0R1 490 aa6.75□□□□□ -1.33
CHD1-208ENST00000512392 SYNCQ9H7C4 482 aa6.75□□□□□ -1.33
CHD1-208ENST00000512392 SUGCTQ9HAC7 445 aa6.75□□□□□ -1.33
CHD1-208ENST00000512392 SNX15Q9NRS6 342 aa6.75□□□□□ -1.33
CHD1-208ENST00000512392 TJP2Q9UDY2 1190 aa6.75□□□□□ -1.33
CHD1-208ENST00000512392 MYPNQ86TC9 1320 aa6.75□□□□□ -1.33
CHD1-208ENST00000512392 TMEM94Q12767 1356 aa6.75□□□□□ -1.33
CHD1-208ENST00000512392 SYNGAP1Q96PV0 1343 aa6.75□□□□□ -1.33
CHD1-208ENST00000512392 CCDC196A0A1B0GTZ2 297 aa6.75□□□□□ -1.33
CHD1-208ENST00000512392 VILLO15195 856 aa6.75□□□□□ -1.33
CHD1-208ENST00000512392 PHGDHO43175 533 aaKnown RBP6.75□□□□□ -1.33
CHD1-208ENST00000512392 PALMO75781 387 aa6.75□□□□□ -1.33
CHD1-208ENST00000512392 SCGB1D1O95968 90 aa6.75□□□□□ -1.33
CHD1-208ENST00000512392 LPLP06858 475 aa6.75□□□□□ -1.33
CHD1-208ENST00000512392 HMOX1P09601 288 aa6.75□□□□□ -1.33
CHD1-208ENST00000512392 TMEM253P0C7T8 217 aa6.75□□□□□ -1.33
CHD1-208ENST00000512392 RFC1P35251 1148 aaPredicted RBP6.75□□□□□ -1.33
CHD1-208ENST00000512392 EIF2DP41214 584 aaKnown RBP6.75□□□□□ -1.33
CHD1-208ENST00000512392 CPT1AP50416 773 aa6.75□□□□□ -1.33
CHD1-208ENST00000512392 ZNF41P51814 821 aaPredicted RBP6.75□□□□□ -1.33
CHD1-208ENST00000512392 HTD2P86397 168 aa6.75□□□□□ -1.33
CHD1-208ENST00000512392 SP140Q13342 867 aa6.75□□□□□ -1.33
CHD1-208ENST00000512392 MAMLD1Q13495 774 aa6.75□□□□□ -1.33
CHD1-208ENST00000512392 ALG11Q2TAA5 492 aa6.75□□□□□ -1.33
CHD1-208ENST00000512392 ZNF805Q5CZA5 627 aa6.75□□□□□ -1.33
CHD1-208ENST00000512392 DZIP1Q86YF9 867 aaKnown RBP6.75□□□□□ -1.33
CHD1-208ENST00000512392 MCATQ8IVS2 390 aaKnown RBP6.75□□□□□ -1.33
CHD1-208ENST00000512392 CCDC103Q8IW40 242 aa6.75□□□□□ -1.33
CHD1-208ENST00000512392 PPIL6Q8IXY8 311 aa6.75□□□□□ -1.33
CHD1-208ENST00000512392 LRRC43Q8N309 656 aa6.75□□□□□ -1.33
CHD1-208ENST00000512392 GLIS1Q8NBF1 620 aa6.75□□□□□ -1.33
CHD1-208ENST00000512392 ETNPPLQ8TBG4 499 aa6.75□□□□□ -1.33
CHD1-208ENST00000512392 RTF1Q92541 710 aaKnown RBP6.75□□□□□ -1.33
CHD1-208ENST00000512392 RABGGTAQ92696 567 aa6.75□□□□□ -1.33
CHD1-208ENST00000512392 RBM14Q96PK6 669 aaKnown RBP6.75□□□□□ -1.33
CHD1-208ENST00000512392 LZTS2Q9BRK4 669 aa6.75□□□□□ -1.33
CHD1-208ENST00000512392 TTPALQ9BTX7 342 aa6.75□□□□□ -1.33
CHD1-208ENST00000512392 MKRN2Q9H000 416 aaKnown RBP6.75□□□□□ -1.33
CHD1-208ENST00000512392 COPS7BQ9H9Q2 264 aaPredicted RBP6.75□□□□□ -1.33
CHD1-208ENST00000512392 CYP4F12Q9HCS2 524 aa6.75□□□□□ -1.33
CHD1-208ENST00000512392 ACTR3BQ9P1U1 418 aa6.75□□□□□ -1.33
CHD1-208ENST00000512392 FAM169AQ9Y6X4 670 aa6.75□□□□□ -1.33
CHD1-208ENST00000512392 TAF4O00268 1085 aa6.74□□□□□ -1.33
CHD1-208ENST00000512392 MSTNO14793 375 aa6.74□□□□□ -1.33
CHD1-208ENST00000512392 GBP1P32455 592 aa6.74□□□□□ -1.33
CHD1-208ENST00000512392 PSMC4P43686 418 aa6.74□□□□□ -1.33
CHD1-208ENST00000512392 HNMTP50135 292 aa6.74□□□□□ -1.33
CHD1-208ENST00000512392 AP2B1P63010 937 aa6.74□□□□□ -1.33
CHD1-208ENST00000512392 SSPNQ14714 243 aa6.74□□□□□ -1.33
CHD1-208ENST00000512392 SEC23AQ15436 765 aa6.74□□□□□ -1.33
CHD1-208ENST00000512392 PAN2Q504Q3 1202 aaKnown RBP6.74□□□□□ -1.33
CHD1-208ENST00000512392 ATPAF1Q5TC12 328 aaPredicted RBP6.74□□□□□ -1.33
CHD1-208ENST00000512392 OLFML2BQ68BL8 750 aa6.74□□□□□ -1.33
CHD1-208ENST00000512392 C11orf88Q6PI97 169 aa6.74□□□□□ -1.33
CHD1-208ENST00000512392 TRAT1Q6PIZ9 186 aa6.74□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms