RNA–Protein interactions for RNA: ENST00000511124.1

CLOCK-209, Transcript of clock circadian regulator, humanhuman

TSL 1 (best)

Gene CLOCK, Length 3,932 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLOCK-209ENST00000511124 PPP1R16AQ96I34 528 aa3.05□□□□□ -1.92
CLOCK-209ENST00000511124 PNMA5Q96PV4 448 aa3.05□□□□□ -1.92
CLOCK-209ENST00000511124 MCCC1Q96RQ3 725 aaPredicted RBP3.05□□□□□ -1.92
CLOCK-209ENST00000511124 EIF2AK1Q9BQI3 630 aaKnown RBP3.05□□□□□ -1.92
CLOCK-209ENST00000511124 EDEM2Q9BV94 578 aa3.05□□□□□ -1.92
CLOCK-209ENST00000511124 NRDE2Q9H7Z3 1164 aa3.05□□□□□ -1.92
CLOCK-209ENST00000511124 MRPL44Q9H9J2 332 aaKnown RBP3.05□□□□□ -1.92
CLOCK-209ENST00000511124 LUC7LQ9NQ29 371 aaKnown RBP3.05□□□□□ -1.92
CLOCK-209ENST00000511124 IL17RBQ9NRM6 502 aa3.05□□□□□ -1.92
CLOCK-209ENST00000511124 DUS2Q9NX74 493 aaKnown RBP3.05□□□□□ -1.92
CLOCK-209ENST00000511124 KIAA1257Q9ULG3 409 aa3.05□□□□□ -1.92
CLOCK-209ENST00000511124 UBE4BO95155 1302 aa3.04□□□□□ -1.92
CLOCK-209ENST00000511124 NEDD4P46934 1319 aa3.04□□□□□ -1.92
CLOCK-209ENST00000511124 ATG7O95352 703 aa3.04□□□□□ -1.92
CLOCK-209ENST00000511124 SLC2A4P14672 509 aa3.04□□□□□ -1.92
CLOCK-209ENST00000511124 HDCP19113 662 aa3.04□□□□□ -1.92
CLOCK-209ENST00000511124 GABRR2P28476 465 aa3.04□□□□□ -1.92
CLOCK-209ENST00000511124 BLKP51451 505 aa3.04□□□□□ -1.92
CLOCK-209ENST00000511124 FAM160A1Q05DH4 1040 aa3.04□□□□□ -1.92
CLOCK-209ENST00000511124 STK3Q13188 491 aa3.04□□□□□ -1.92
CLOCK-209ENST00000511124 EIF4HQ15056 248 aaKnown RBP3.04□□□□□ -1.92
CLOCK-209ENST00000511124 BMT2Q1RMZ1 405 aa3.04□□□□□ -1.92
CLOCK-209ENST00000511124 CTC1Q2NKJ3 1217 aa3.04□□□□□ -1.92
CLOCK-209ENST00000511124 PPM1JQ5JR12 505 aa3.04□□□□□ -1.92
CLOCK-209ENST00000511124 TMCO4Q5TGY1 634 aa3.04□□□□□ -1.92
CLOCK-209ENST00000511124 CNNM4Q6P4Q7 775 aa3.04□□□□□ -1.92
CLOCK-209ENST00000511124 WDR5BQ86VZ2 330 aa3.04□□□□□ -1.92
CLOCK-209ENST00000511124 GLYCTKQ8IVS8 523 aa3.04□□□□□ -1.92
CLOCK-209ENST00000511124 MFSD6LQ8IWD5 586 aa3.04□□□□□ -1.92
CLOCK-209ENST00000511124 SETD7Q8WTS6 366 aaKnown RBP3.04□□□□□ -1.92
CLOCK-209ENST00000511124 GAB3Q8WWW8 586 aa3.04□□□□□ -1.92
CLOCK-209ENST00000511124 DHX38Q92620 1227 aaKnown RBP3.04□□□□□ -1.92
CLOCK-209ENST00000511124 DYDC2Q96IM9 177 aa3.04□□□□□ -1.92
CLOCK-209ENST00000511124 IPO9Q96P70 1041 aaKnown RBP3.04□□□□□ -1.92
CLOCK-209ENST00000511124 SLC29A3Q9BZD2 475 aa3.04□□□□□ -1.92
CLOCK-209ENST00000511124 USP29Q9HBJ7 922 aa3.04□□□□□ -1.92
CLOCK-209ENST00000511124 SCUBE2Q9NQ36 999 aa3.04□□□□□ -1.92
CLOCK-209ENST00000511124 CYLDQ9NQC7 956 aa3.04□□□□□ -1.92
CLOCK-209ENST00000511124 VPS54Q9P1Q0 977 aa3.04□□□□□ -1.92
CLOCK-209ENST00000511124 MTRRQ9UBK8 725 aa3.04□□□□□ -1.92
CLOCK-209ENST00000511124 ITGA11Q9UKX5 1188 aa3.04□□□□□ -1.92
CLOCK-209ENST00000511124 HPCAL4Q9UM19 191 aa3.04□□□□□ -1.92
CLOCK-209ENST00000511124 MAGED2Q9UNF1 606 aaPredicted RBP3.04□□□□□ -1.92
CLOCK-209ENST00000511124 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP3.04□□□□□ -1.92
CLOCK-209ENST00000511124 AK5Q9Y6K8 562 aa3.04□□□□□ -1.92
CLOCK-209ENST00000511124 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP3.04□□□□□ -1.92
CLOCK-209ENST00000511124 A0A1B0GTW7 788 aa3.04□□□□□ -1.92
CLOCK-209ENST00000511124 LOC105378220A0A1B0GUY1 285 aaPredicted RBP3.04□□□□□ -1.92
CLOCK-209ENST00000511124 VPS37CA5D8V6 355 aaPredicted RBP3.04□□□□□ -1.92
CLOCK-209ENST00000511124 GFRA2O00451 464 aa3.04□□□□□ -1.92
CLOCK-209ENST00000511124 CAPN5O15484 640 aaPredicted RBP3.04□□□□□ -1.92
CLOCK-209ENST00000511124 EXOC3O60645 756 aa3.04□□□□□ -1.92
CLOCK-209ENST00000511124 JUPP14923 745 aa3.04□□□□□ -1.92
CLOCK-209ENST00000511124 MYOGP15173 224 aa3.04□□□□□ -1.92
CLOCK-209ENST00000511124 RPA1P27694 616 aa3.04□□□□□ -1.92
CLOCK-209ENST00000511124 HOXA6P31267 233 aa3.04□□□□□ -1.92
CLOCK-209ENST00000511124 EIF2DP41214 584 aaKnown RBP3.04□□□□□ -1.92
CLOCK-209ENST00000511124 MATKP42679 507 aa3.04□□□□□ -1.92
CLOCK-209ENST00000511124 TNFRSF4P43489 277 aa3.04□□□□□ -1.92
CLOCK-209ENST00000511124 NOVP48745 357 aa3.04□□□□□ -1.92
CLOCK-209ENST00000511124 PEX3P56589 373 aa3.04□□□□□ -1.92
CLOCK-209ENST00000511124 TFAMQ00059 246 aaKnown RBP3.04□□□□□ -1.92
CLOCK-209ENST00000511124 AP1B1Q10567 949 aa3.04□□□□□ -1.92
CLOCK-209ENST00000511124 SEC23AQ15436 765 aa3.04□□□□□ -1.92
CLOCK-209ENST00000511124 RSPO4Q2I0M5 234 aaPredicted RBP3.04□□□□□ -1.92
CLOCK-209ENST00000511124 HECTD3Q5T447 861 aa3.04□□□□□ -1.92
CLOCK-209ENST00000511124 HEATR6Q6AI08 1181 aaKnown RBP3.04□□□□□ -1.92
CLOCK-209ENST00000511124 GRASPQ7Z6J2 395 aaPredicted RBP3.04□□□□□ -1.92
CLOCK-209ENST00000511124 GPBP1Q86WP2 473 aa3.04□□□□□ -1.92
CLOCK-209ENST00000511124 CATSPER3Q86XQ3 398 aa3.04□□□□□ -1.92
CLOCK-209ENST00000511124 DCP2Q8IU60 420 aaKnown RBP3.04□□□□□ -1.92
CLOCK-209ENST00000511124 MAB21L3Q8N8X9 362 aa3.04□□□□□ -1.92
CLOCK-209ENST00000511124 OR6C4Q8NGE1 309 aa3.04□□□□□ -1.92
CLOCK-209ENST00000511124 OR6B3Q8NGW1 331 aa3.04□□□□□ -1.92
CLOCK-209ENST00000511124 SNX19Q92543 992 aa3.04□□□□□ -1.92
CLOCK-209ENST00000511124 PRCCQ92733 491 aaPredicted RBP3.04□□□□□ -1.92
CLOCK-209ENST00000511124 METTL14Q9HCE5 456 aaKnown RBP3.04□□□□□ -1.92
CLOCK-209ENST00000511124 PRM3Q9NNZ6 103 aa3.04□□□□□ -1.92
CLOCK-209ENST00000511124 ARHGEF4Q9NR80 690 aa3.04□□□□□ -1.92
CLOCK-209ENST00000511124 FTSJ1Q9UET6 329 aa3.04□□□□□ -1.92
CLOCK-209ENST00000511124 FBXW11Q9UKB1 542 aa3.04□□□□□ -1.92
CLOCK-209ENST00000511124 CDH9Q9ULB4 789 aa3.04□□□□□ -1.92
CLOCK-209ENST00000511124 C2CD2Q9Y426 696 aa3.04□□□□□ -1.92
CLOCK-209ENST00000511124 CYP3A7-CYP3A51PA0A087WV96 503 aa3.04□□□□□ -1.92
CLOCK-209ENST00000511124 PABPN1LA6NDY0 278 aaKnown RBP3.04□□□□□ -1.92
CLOCK-209ENST00000511124 C2CD4DB7Z1M9 353 aa3.04□□□□□ -1.92
CLOCK-209ENST00000511124 NEMP1O14524 444 aa3.04□□□□□ -1.92
CLOCK-209ENST00000511124 PRMT3O60678 531 aa3.04□□□□□ -1.92
CLOCK-209ENST00000511124 RECQL4O94761 1208 aa3.04□□□□□ -1.92
CLOCK-209ENST00000511124 MLYCDO95822 493 aa3.04□□□□□ -1.92
CLOCK-209ENST00000511124 IGHEP01854 428 aa3.04□□□□□ -1.92
CLOCK-209ENST00000511124 CHRNA1P02708 482 aa3.04□□□□□ -1.92
CLOCK-209ENST00000511124 RHOP08100 348 aa3.04□□□□□ -1.92
CLOCK-209ENST00000511124 CYP21A2P08686 494 aa3.04□□□□□ -1.92
CLOCK-209ENST00000511124 SP9P0CG40 484 aa3.04□□□□□ -1.92
CLOCK-209ENST00000511124 FGFR1P11362 822 aa3.04□□□□□ -1.92
CLOCK-209ENST00000511124 CYP3A7P24462 503 aa3.04□□□□□ -1.92
CLOCK-209ENST00000511124 GUCY2CP25092 1073 aa3.04□□□□□ -1.92
CLOCK-209ENST00000511124 YWHAQP27348 245 aa3.04□□□□□ -1.92
CLOCK-209ENST00000511124 MLH1P40692 756 aa3.04□□□□□ -1.92
Retrieved 100 of 20,778 RNA–protein pairs in 25.1 ms