RNA–Protein interactions for RNA: ENST00000511001.2

CHFR-208, Transcript of checkpoint with forkhead and ring finger domains, humanhuman

TSL 5

Gene CHFR, Length 892 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHFR-208ENST00000511001 PHLDB3Q6NSJ2 640 aa13□□□□□ -0.33
CHFR-208ENST00000511001 PDZD4Q76G19 769 aaPredicted RBP13□□□□□ -0.33
CHFR-208ENST00000511001 LRRTM3Q86VH5 581 aa13□□□□□ -0.33
CHFR-208ENST00000511001 SCFD1Q8WVM8 642 aa13□□□□□ -0.33
CHFR-208ENST00000511001 ZCWPW1Q9H0M4 648 aa13□□□□□ -0.33
CHFR-208ENST00000511001 BLZF1Q9H2G9 400 aa13□□□□□ -0.33
CHFR-208ENST00000511001 TBC1D17Q9HA65 648 aa13□□□□□ -0.33
CHFR-208ENST00000511001 PDE11AQ9HCR9 933 aa13□□□□□ -0.33
CHFR-208ENST00000511001 ARHGEF3Q9NR81 526 aa13□□□□□ -0.33
CHFR-208ENST00000511001 FAM13BQ9NYF5 915 aa13□□□□□ -0.33
CHFR-208ENST00000511001 SERTAD1Q9UHV2 236 aa13□□□□□ -0.33
CHFR-208ENST00000511001 SIX4Q9UIU6 781 aa13□□□□□ -0.33
CHFR-208ENST00000511001 DSEQ9UL01 958 aa13□□□□□ -0.33
CHFR-208ENST00000511001 AGAP1Q9UPQ3 857 aa13□□□□□ -0.33
CHFR-208ENST00000511001 SLC27A5Q9Y2P5 690 aa13□□□□□ -0.33
CHFR-208ENST00000511001 F5P12259 2224 aa13□□□□□ -0.33
CHFR-208ENST00000511001 ANAPC1Q9H1A4 1944 aa13□□□□□ -0.33
CHFR-208ENST00000511001 KIF26AQ9ULI4 1882 aaPredicted RBP12.99□□□□□ -0.33
CHFR-208ENST00000511001 PATJQ8NI35 1801 aa12.99□□□□□ -0.33
CHFR-208ENST00000511001 PTPRJQ12913 1337 aa12.99□□□□□ -0.33
CHFR-208ENST00000511001 H0Y858 1186 aa12.99□□□□□ -0.33
CHFR-208ENST00000511001 ACTN4O43707 911 aaKnown RBP12.99□□□□□ -0.33
CHFR-208ENST00000511001 KLRC4O43908 158 aa12.99□□□□□ -0.33
CHFR-208ENST00000511001 ECI2O75521 394 aa12.99□□□□□ -0.33
CHFR-208ENST00000511001 SOAT2O75908 522 aa12.99□□□□□ -0.33
CHFR-208ENST00000511001 ITGB3P05106 788 aa12.99□□□□□ -0.33
CHFR-208ENST00000511001 MYL4P12829 197 aa12.99□□□□□ -0.33
CHFR-208ENST00000511001 GJA1P17302 382 aa12.99□□□□□ -0.33
CHFR-208ENST00000511001 AFMP43652 599 aa12.99□□□□□ -0.33
CHFR-208ENST00000511001 SV2CQ496J9 727 aa12.99□□□□□ -0.33
CHFR-208ENST00000511001 FAM78AQ5JUQ0 283 aa12.99□□□□□ -0.33
CHFR-208ENST00000511001 CYP4A22Q5TCH4 519 aa12.99□□□□□ -0.33
CHFR-208ENST00000511001 LMBRD2Q68DH5 695 aaPredicted RBP12.99□□□□□ -0.33
CHFR-208ENST00000511001 IQCEQ6IPM2 695 aa12.99□□□□□ -0.33
CHFR-208ENST00000511001 STXBP4Q6ZWJ1 553 aa12.99□□□□□ -0.33
CHFR-208ENST00000511001 CBWD2Q8IUF1 395 aa12.99□□□□□ -0.33
CHFR-208ENST00000511001 GRAMD1CQ8IYS0 662 aa12.99□□□□□ -0.33
CHFR-208ENST00000511001 ELMOD1Q8N336 334 aa12.99□□□□□ -0.33
CHFR-208ENST00000511001 SHKBP1Q8TBC3 707 aa12.99□□□□□ -0.33
CHFR-208ENST00000511001 NOC3LQ8WTT2 800 aaKnown RBP12.99□□□□□ -0.33
CHFR-208ENST00000511001 LEO1Q8WVC0 666 aaPredicted RBP12.99□□□□□ -0.33
CHFR-208ENST00000511001 ZSWIM3Q96MP5 696 aa12.99□□□□□ -0.33
CHFR-208ENST00000511001 ZNF560Q96MR9 790 aa12.99□□□□□ -0.33
CHFR-208ENST00000511001 ASB16Q96NS5 453 aa12.99□□□□□ -0.33
CHFR-208ENST00000511001 HSPBP1Q9NZL4 362 aa12.99□□□□□ -0.33
CHFR-208ENST00000511001 NCANO14594 1321 aa12.98□□□□□ -0.33
CHFR-208ENST00000511001 UBE4BO95155 1302 aa12.98□□□□□ -0.33
CHFR-208ENST00000511001 PVALEFA0A1B0GWK0 134 aa12.98□□□□□ -0.33
CHFR-208ENST00000511001 PNPLA4P41247 253 aa12.98□□□□□ -0.33
CHFR-208ENST00000511001 CDR1P51861 262 aa12.98□□□□□ -0.33
CHFR-208ENST00000511001 STARD6P59095 220 aa12.98□□□□□ -0.33
CHFR-208ENST00000511001 PLD1Q13393 1074 aa12.98□□□□□ -0.33
CHFR-208ENST00000511001 TEAD2Q15562 447 aa12.98□□□□□ -0.33
CHFR-208ENST00000511001 BMT2Q1RMZ1 405 aa12.98□□□□□ -0.33
CHFR-208ENST00000511001 SLC39A12Q504Y0 691 aa12.98□□□□□ -0.33
CHFR-208ENST00000511001 OSTM1Q86WC4 334 aa12.98□□□□□ -0.33
CHFR-208ENST00000511001 METTL23Q86XA0 190 aa12.98□□□□□ -0.33
CHFR-208ENST00000511001 NELFCDQ8IXH7 590 aa12.98□□□□□ -0.33
CHFR-208ENST00000511001 CCDC105Q8IYK2 499 aa12.98□□□□□ -0.33
CHFR-208ENST00000511001 PDCL2Q8N4E4 241 aa12.98□□□□□ -0.33
CHFR-208ENST00000511001 CSGALNACT2Q8N6G5 542 aa12.98□□□□□ -0.33
CHFR-208ENST00000511001 LRRC52Q8N7C0 313 aa12.98□□□□□ -0.33
CHFR-208ENST00000511001 LEMD2Q8NC56 503 aa12.98□□□□□ -0.33
CHFR-208ENST00000511001 OR5B17Q8NGF7 314 aa12.98□□□□□ -0.33
CHFR-208ENST00000511001 CACTINQ8WUQ7 758 aaKnown RBP12.98□□□□□ -0.33
CHFR-208ENST00000511001 ELSPBP1Q96BH3 223 aa12.98□□□□□ -0.33
CHFR-208ENST00000511001 DDX23Q9BUQ8 820 aaKnown RBP12.98□□□□□ -0.33
CHFR-208ENST00000511001 MTMR12Q9C0I1 747 aa12.98□□□□□ -0.33
CHFR-208ENST00000511001 ZNF334Q9HCZ1 680 aaPredicted RBP12.98□□□□□ -0.33
CHFR-208ENST00000511001 SLC39A2Q9NP94 309 aa12.98□□□□□ -0.33
CHFR-208ENST00000511001 ASAH2Q9NR71 780 aa12.98□□□□□ -0.33
CHFR-208ENST00000511001 AGPAT3Q9NRZ7 376 aa12.98□□□□□ -0.33
CHFR-208ENST00000511001 TMLHEQ9NVH6 421 aa12.98□□□□□ -0.33
CHFR-208ENST00000511001 INTS13Q9NVM9 706 aa12.98□□□□□ -0.33
CHFR-208ENST00000511001 DLGAP2Q9P1A6 1054 aa12.98□□□□□ -0.33
CHFR-208ENST00000511001 HSFX1Q9UBD0 423 aa12.98□□□□□ -0.33
CHFR-208ENST00000511001 L1RE1Q9UN81 338 aa12.98□□□□□ -0.33
CHFR-208ENST00000511001 HPSEQ9Y251 543 aa12.98□□□□□ -0.33
CHFR-208ENST00000511001 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP12.97□□□□□ -0.33
CHFR-208ENST00000511001 A0A1B0GVL5 298 aa12.97□□□□□ -0.33
CHFR-208ENST00000511001 ZNF233A6NK53 670 aa12.97□□□□□ -0.33
CHFR-208ENST00000511001 SHISA7A6NL88 538 aa12.97□□□□□ -0.33
CHFR-208ENST00000511001 CLIC2O15247 247 aa12.97□□□□□ -0.33
CHFR-208ENST00000511001 TMEM191BP0C7N4 346 aa12.97□□□□□ -0.33
CHFR-208ENST00000511001 SLFN14P0C7P3 912 aa12.97□□□□□ -0.33
CHFR-208ENST00000511001 PFKFB1P16118 471 aa12.97□□□□□ -0.33
CHFR-208ENST00000511001 ATF6P18850 670 aa12.97□□□□□ -0.33
CHFR-208ENST00000511001 ALDH1A3P47895 512 aa12.97□□□□□ -0.33
CHFR-208ENST00000511001 EPHB3P54753 998 aa12.97□□□□□ -0.33
CHFR-208ENST00000511001 BFSP1Q12934 665 aa12.97□□□□□ -0.33
CHFR-208ENST00000511001 SNW1Q13573 536 aaKnown RBP12.97□□□□□ -0.33
CHFR-208ENST00000511001 MLF2Q15773 248 aaPredicted RBP12.97□□□□□ -0.33
CHFR-208ENST00000511001 SLC44A4Q53GD3 710 aa12.97□□□□□ -0.33
CHFR-208ENST00000511001 GAREM2Q75VX8 874 aa12.97□□□□□ -0.33
CHFR-208ENST00000511001 DNAJB7Q7Z6W7 309 aaPredicted RBP12.97□□□□□ -0.33
CHFR-208ENST00000511001 THEM5Q8N1Q8 247 aa12.97□□□□□ -0.33
CHFR-208ENST00000511001 DTWD2Q8NBA8 298 aa12.97□□□□□ -0.33
CHFR-208ENST00000511001 ATOH1Q92858 354 aaPredicted RBP12.97□□□□□ -0.33
CHFR-208ENST00000511001 PSMG2Q969U7 264 aa12.97□□□□□ -0.33
CHFR-208ENST00000511001 PAGE5Q96GU1 130 aa12.97□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 40 ms