RNA–Protein interactions for RNA: ENST00000509529.1

CAST-226, Transcript of calpastatin, humanhuman

TSL 2

Gene CAST, Length 3,066 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAST-226ENST00000509529 KRT83P78385 493 aa2.43□□□□□ -2.02
CAST-226ENST00000509529 EXOSC10Q01780 885 aaKnown RBP2.43□□□□□ -2.02
CAST-226ENST00000509529 KLC1Q07866 573 aa2.43□□□□□ -2.02
CAST-226ENST00000509529 PPIDQ08752 370 aaKnown RBP2.43□□□□□ -2.02
CAST-226ENST00000509529 PRPF4BQ13523 1007 aaKnown RBP2.43□□□□□ -2.02
CAST-226ENST00000509529 TRIM29Q14134 588 aa2.43□□□□□ -2.02
CAST-226ENST00000509529 SLC39A14Q15043 492 aa2.43□□□□□ -2.02
CAST-226ENST00000509529 PPP2R5EQ16537 467 aa2.43□□□□□ -2.02
CAST-226ENST00000509529 RGL3Q3MIN7 710 aa2.43□□□□□ -2.02
CAST-226ENST00000509529 GKAP1Q5VSY0 366 aaPredicted RBP2.43□□□□□ -2.02
CAST-226ENST00000509529 IRAK1BP1Q5VVH5 260 aa2.43□□□□□ -2.02
CAST-226ENST00000509529 FAM171BQ6P995 826 aa2.43□□□□□ -2.02
CAST-226ENST00000509529 HDGFL2Q7Z4V5 671 aaPredicted RBP2.43□□□□□ -2.02
CAST-226ENST00000509529 TMC3Q7Z5M5 1100 aa2.43□□□□□ -2.02
CAST-226ENST00000509529 COL23A1Q86Y22 540 aaPredicted RBP2.43□□□□□ -2.02
CAST-226ENST00000509529 SLFN12Q8IYM2 578 aa2.43□□□□□ -2.02
CAST-226ENST00000509529 NUP93Q8N1F7 819 aa2.43□□□□□ -2.02
CAST-226ENST00000509529 BBS5Q8N3I7 341 aa2.43□□□□□ -2.02
CAST-226ENST00000509529 ZNF655Q8N720 491 aaPredicted RBP2.43□□□□□ -2.02
CAST-226ENST00000509529 CNBD1Q8NA66 436 aa2.43□□□□□ -2.02
CAST-226ENST00000509529 RBBP8NLQ8NC74 664 aaPredicted RBP2.43□□□□□ -2.02
CAST-226ENST00000509529 DQX1Q8TE96 717 aaKnown RBP2.43□□□□□ -2.02
CAST-226ENST00000509529 CCDC12Q8WUD4 166 aaPredicted RBP2.43□□□□□ -2.02
CAST-226ENST00000509529 STON2Q8WXE9 905 aa2.43□□□□□ -2.02
CAST-226ENST00000509529 SYN2Q92777 582 aaPredicted RBP2.43□□□□□ -2.02
CAST-226ENST00000509529 DPF3Q92784 378 aa2.43□□□□□ -2.02
CAST-226ENST00000509529 RRP36Q96EU6 259 aaKnown RBP2.43□□□□□ -2.02
CAST-226ENST00000509529 TMA16Q96EY4 203 aaKnown RBP2.43□□□□□ -2.02
CAST-226ENST00000509529 STAMBPL1Q96FJ0 436 aa2.43□□□□□ -2.02
CAST-226ENST00000509529 VPS50Q96JG6 964 aa2.43□□□□□ -2.02
CAST-226ENST00000509529 ZNF333Q96JL9 665 aa2.43□□□□□ -2.02
CAST-226ENST00000509529 NDNQ99608 321 aa2.43□□□□□ -2.02
CAST-226ENST00000509529 TUBB6Q9BUF5 446 aa2.43□□□□□ -2.02
CAST-226ENST00000509529 SPATA16Q9BXB7 569 aa2.43□□□□□ -2.02
CAST-226ENST00000509529 IFIH1Q9BYX4 1025 aaKnown RBP2.43□□□□□ -2.02
CAST-226ENST00000509529 TRIM4Q9C037 500 aa2.43□□□□□ -2.02
CAST-226ENST00000509529 TTYH3Q9C0H2 523 aa2.43□□□□□ -2.02
CAST-226ENST00000509529 DPH5Q9H2P9 285 aa2.43□□□□□ -2.02
CAST-226ENST00000509529 ERVK13-1Q9NX77 482 aa2.43□□□□□ -2.02
CAST-226ENST00000509529 TRMT1Q9NXH9 659 aaKnown RBP2.43□□□□□ -2.02
CAST-226ENST00000509529 CYP39A1Q9NYL5 469 aa2.43□□□□□ -2.02
CAST-226ENST00000509529 UBAP1Q9NZ09 502 aa2.43□□□□□ -2.02
CAST-226ENST00000509529 C11orf21Q9P2W6 132 aa2.43□□□□□ -2.02
CAST-226ENST00000509529 HSFX1Q9UBD0 423 aa2.43□□□□□ -2.02
CAST-226ENST00000509529 MAGEC2Q9UBF1 373 aaPredicted RBP2.43□□□□□ -2.02
CAST-226ENST00000509529 SAP30BPQ9UHR5 308 aaKnown RBP2.43□□□□□ -2.02
CAST-226ENST00000509529 ACSL6Q9UKU0 697 aa2.43□□□□□ -2.02
CAST-226ENST00000509529 PAIP2BQ9ULR5 123 aaKnown RBP2.43□□□□□ -2.02
CAST-226ENST00000509529 SNX12Q9UMY4 172 aa2.43□□□□□ -2.02
CAST-226ENST00000509529 C2CD2Q9Y426 696 aa2.43□□□□□ -2.02
CAST-226ENST00000509529 RIPOR2Q9Y4F9 1068 aa2.43□□□□□ -2.02
CAST-226ENST00000509529 SNX9Q9Y5X1 595 aa2.43□□□□□ -2.02
CAST-226ENST00000509529 SAR1BQ9Y6B6 198 aa2.43□□□□□ -2.02
CAST-226ENST00000509529 BZW2Q9Y6E2 419 aaKnown RBP2.43□□□□□ -2.02
CAST-226ENST00000509529 TNRC6CQ9HCJ0 1690 aaKnown RBP2.43□□□□□ -2.02
CAST-226ENST00000509529 KIF13AQ9H1H9 1805 aa2.43□□□□□ -2.02
CAST-226ENST00000509529 TRPM3Q9HCF6 1732 aaPredicted RBP2.43□□□□□ -2.02
CAST-226ENST00000509529 SCN7AQ01118 1682 aa2.43□□□□□ -2.02
CAST-226ENST00000509529 DPPA5A6NC42 116 aa2.43□□□□□ -2.02
CAST-226ENST00000509529 TRIM64CA6NLI5 447 aa2.43□□□□□ -2.02
CAST-226ENST00000509529 F8W8V4 182 aa2.43□□□□□ -2.02
CAST-226ENST00000509529 MATN2O00339 956 aa2.43□□□□□ -2.02
CAST-226ENST00000509529 RGS13O14921 159 aa2.43□□□□□ -2.02
CAST-226ENST00000509529 PEX1O43933 1283 aa2.43□□□□□ -2.02
CAST-226ENST00000509529 C8BP07358 591 aa2.43□□□□□ -2.02
CAST-226ENST00000509529 USP17L7P0C7H9 530 aa2.43□□□□□ -2.02
CAST-226ENST00000509529 LMNB1P20700 586 aa2.43□□□□□ -2.02
CAST-226ENST00000509529 RGS2P41220 211 aa2.43□□□□□ -2.02
CAST-226ENST00000509529 PEX5P50542 639 aa2.43□□□□□ -2.02
CAST-226ENST00000509529 RPS3AP61247 264 aaKnown RBP2.43□□□□□ -2.02
CAST-226ENST00000509529 RPS26P62854 115 aaKnown RBP2.43□□□□□ -2.02
CAST-226ENST00000509529 HPCAP84074 193 aa2.43□□□□□ -2.02
CAST-226ENST00000509529 MPP3Q13368 585 aa2.43□□□□□ -2.02
CAST-226ENST00000509529 TWISTNBQ3B726 338 aaPredicted RBP2.43□□□□□ -2.02
CAST-226ENST00000509529 DPCR1Q3MIW9 517 aa2.43□□□□□ -2.02
CAST-226ENST00000509529 ACCSLQ4AC99 568 aa2.43□□□□□ -2.02
CAST-226ENST00000509529 SPECC1Q5M775 1068 aa2.43□□□□□ -2.02
CAST-226ENST00000509529 SPATA1Q5VX52 437 aa2.43□□□□□ -2.02
CAST-226ENST00000509529 HAUS3Q68CZ6 603 aa2.43□□□□□ -2.02
CAST-226ENST00000509529 ZNF280DQ6N043 979 aa2.43□□□□□ -2.02
CAST-226ENST00000509529 RAD9BQ6WBX8 426 aa2.43□□□□□ -2.02
CAST-226ENST00000509529 KRT28Q7Z3Y7 464 aa2.43□□□□□ -2.02
CAST-226ENST00000509529 HAUS6Q7Z4H7 955 aa2.43□□□□□ -2.02
CAST-226ENST00000509529 IFT20Q8IY31 132 aa2.43□□□□□ -2.02
CAST-226ENST00000509529 CCDC63Q8NA47 563 aa2.43□□□□□ -2.02
CAST-226ENST00000509529 MINDY2Q8NBR6 621 aa2.43□□□□□ -2.02
CAST-226ENST00000509529 NOA1Q8NC60 698 aaKnown RBP2.43□□□□□ -2.02
CAST-226ENST00000509529 CCDC197Q8NCU1 140 aa2.43□□□□□ -2.02
CAST-226ENST00000509529 ANGPTL6Q8NI99 470 aa2.43□□□□□ -2.02
CAST-226ENST00000509529 TBC1D16Q8TBP0 767 aa2.43□□□□□ -2.02
CAST-226ENST00000509529 AGAP11Q8TF27 550 aa2.43□□□□□ -2.02
CAST-226ENST00000509529 PPIL4Q8WUA2 492 aaKnown RBP eCLIP2.43□□□□□ -2.02
CAST-226ENST00000509529 NUP133Q8WUM0 1156 aa2.43□□□□□ -2.02
CAST-226ENST00000509529 SCFD1Q8WVM8 642 aa2.43□□□□□ -2.02
CAST-226ENST00000509529 CHMP6Q96FZ7 201 aa2.43□□□□□ -2.02
CAST-226ENST00000509529 CNDP2Q96KP4 475 aaKnown RBP2.43□□□□□ -2.02
CAST-226ENST00000509529 RNPC3Q96LT9 517 aaKnown RBP2.43□□□□□ -2.02
CAST-226ENST00000509529 NEK1Q96PY6 1258 aa2.43□□□□□ -2.02
CAST-226ENST00000509529 CDC5LQ99459 802 aaKnown RBP2.43□□□□□ -2.02
CAST-226ENST00000509529 ISCUQ9H1K1 167 aa2.43□□□□□ -2.02
Retrieved 100 of 20,778 RNA–protein pairs in 56.3 ms