RNA–Protein interactions for RNA: ENST00000508531.1

PDLIM5-211, Transcript of PDZ and LIM domain 5, humanhuman

TSL 4

Gene PDLIM5, Length 480 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-211ENST00000508531 GTF2A1P52655 376 aaPredicted RBP5.29□□□□□ -1.56
PDLIM5-211ENST00000508531 BLOC1S1P78537 153 aa5.29□□□□□ -1.56
PDLIM5-211ENST00000508531 DHX8Q14562 1220 aaKnown RBP5.29□□□□□ -1.56
PDLIM5-211ENST00000508531 ERCC6LQ2NKX8 1250 aa5.29□□□□□ -1.56
PDLIM5-211ENST00000508531 TSHZ3Q63HK5 1081 aa5.29□□□□□ -1.56
PDLIM5-211ENST00000508531 ICE2Q659A1 982 aa5.29□□□□□ -1.56
PDLIM5-211ENST00000508531 FBXO42Q6P3S6 717 aa5.29□□□□□ -1.56
PDLIM5-211ENST00000508531 Q6ZVL8 140 aa5.29□□□□□ -1.56
PDLIM5-211ENST00000508531 MED25Q71SY5 747 aa5.29□□□□□ -1.56
PDLIM5-211ENST00000508531 CCDC91Q7Z6B0 441 aa5.29□□□□□ -1.56
PDLIM5-211ENST00000508531 CMIPQ8IY22 773 aa5.29□□□□□ -1.56
PDLIM5-211ENST00000508531 SIMC1Q8NDZ2 872 aa5.29□□□□□ -1.56
PDLIM5-211ENST00000508531 GPR156Q8NFN8 814 aa5.29□□□□□ -1.56
PDLIM5-211ENST00000508531 OR7D4Q8NG98 312 aa5.29□□□□□ -1.56
PDLIM5-211ENST00000508531 TSPEARQ8WU66 669 aa5.29□□□□□ -1.56
PDLIM5-211ENST00000508531 TGFBRAP1Q8WUH2 860 aa5.29□□□□□ -1.56
PDLIM5-211ENST00000508531 CAMKK2Q96RR4 588 aa5.29□□□□□ -1.56
PDLIM5-211ENST00000508531 UHRF1Q96T88 793 aaPredicted RBP5.29□□□□□ -1.56
PDLIM5-211ENST00000508531 TTC1Q99614 292 aa5.29□□□□□ -1.56
PDLIM5-211ENST00000508531 ZSWIM1Q9BR11 485 aa5.29□□□□□ -1.56
PDLIM5-211ENST00000508531 ADARB2Q9NS39 739 aaKnown RBP5.29□□□□□ -1.56
PDLIM5-211ENST00000508531 RRP7BPQ9NSQ0 103 aa5.29□□□□□ -1.56
PDLIM5-211ENST00000508531 KLHL11Q9NVR0 708 aa5.29□□□□□ -1.56
PDLIM5-211ENST00000508531 RAI14Q9P0K7 980 aa5.29□□□□□ -1.56
PDLIM5-211ENST00000508531 USP25Q9UHP3 1055 aa5.29□□□□□ -1.56
PDLIM5-211ENST00000508531 INSL6Q9Y581 213 aa5.29□□□□□ -1.56
PDLIM5-211ENST00000508531 CEP83Q9Y592 693 aa5.29□□□□□ -1.56
PDLIM5-211ENST00000508531 COX11Q9Y6N1 276 aa5.29□□□□□ -1.56
PDLIM5-211ENST00000508531 MROH1Q8NDA8 1641 aa5.29□□□□□ -1.56
PDLIM5-211ENST00000508531 PTPRUQ92729 1446 aa5.29□□□□□ -1.56
PDLIM5-211ENST00000508531 RIMS2Q9UQ26 1411 aa5.29□□□□□ -1.56
PDLIM5-211ENST00000508531 GLI3P10071 1580 aa5.29□□□□□ -1.56
PDLIM5-211ENST00000508531 SMTNL1A8MU46 457 aa5.28□□□□□ -1.56
PDLIM5-211ENST00000508531 FOSP01100 380 aaPredicted RBP5.28□□□□□ -1.56
PDLIM5-211ENST00000508531 CCDC172P0C7W6 258 aa5.28□□□□□ -1.56
PDLIM5-211ENST00000508531 CD38P28907 300 aa5.28□□□□□ -1.56
PDLIM5-211ENST00000508531 TPM4P67936 248 aa5.28□□□□□ -1.56
PDLIM5-211ENST00000508531 SATB1Q01826 763 aa5.28□□□□□ -1.56
PDLIM5-211ENST00000508531 SCAPQ12770 1279 aa5.28□□□□□ -1.56
PDLIM5-211ENST00000508531 STRN3Q13033 797 aa5.28□□□□□ -1.56
PDLIM5-211ENST00000508531 MPP3Q13368 585 aa5.28□□□□□ -1.56
PDLIM5-211ENST00000508531 NBPF8Q3BBV2 869 aa5.28□□□□□ -1.56
PDLIM5-211ENST00000508531 ZSCAN23Q3MJ62 389 aa5.28□□□□□ -1.56
PDLIM5-211ENST00000508531 B3GNTL1Q67FW5 361 aaPredicted RBP5.28□□□□□ -1.56
PDLIM5-211ENST00000508531 DDX46Q7L014 1031 aaKnown RBP5.28□□□□□ -1.56
PDLIM5-211ENST00000508531 GPR149Q86SP6 731 aa5.28□□□□□ -1.56
PDLIM5-211ENST00000508531 RNF180Q86T96 592 aa5.28□□□□□ -1.56
PDLIM5-211ENST00000508531 GAS2L3Q86XJ1 694 aa5.28□□□□□ -1.56
PDLIM5-211ENST00000508531 TICAM2Q86XR7 235 aa5.28□□□□□ -1.56
PDLIM5-211ENST00000508531 MAPKAPK5Q8IW41 473 aa5.28□□□□□ -1.56
PDLIM5-211ENST00000508531 SUGP2Q8IX01 1082 aaKnown RBP eCLIP5.28□□□□□ -1.56
PDLIM5-211ENST00000508531 CNPY4Q8N129 248 aa5.28□□□□□ -1.56
PDLIM5-211ENST00000508531 ZNF397Q8NF99 534 aaPredicted RBP5.28□□□□□ -1.56
PDLIM5-211ENST00000508531 AUTS2Q8WXX7 1259 aa5.28□□□□□ -1.56
PDLIM5-211ENST00000508531 ALOXE3Q9BYJ1 711 aa5.28□□□□□ -1.56
PDLIM5-211ENST00000508531 FAM107BQ9H098 131 aa5.28□□□□□ -1.56
PDLIM5-211ENST00000508531 BCO1Q9HAY6 547 aa5.28□□□□□ -1.56
PDLIM5-211ENST00000508531 TESQ9UGI8 421 aaKnown RBP5.28□□□□□ -1.56
PDLIM5-211ENST00000508531 ATRNL1Q5VV63 1379 aa5.28□□□□□ -1.56
PDLIM5-211ENST00000508531 LAMC1P11047 1609 aa5.27□□□□□ -1.57
PDLIM5-211ENST00000508531 ENPP3O14638 875 aa5.27□□□□□ -1.57
PDLIM5-211ENST00000508531 ZEB2O60315 1214 aa5.27□□□□□ -1.57
PDLIM5-211ENST00000508531 ESRRBO95718 433 aa5.27□□□□□ -1.57
PDLIM5-211ENST00000508531 RAP2AP10114 183 aa5.27□□□□□ -1.57
PDLIM5-211ENST00000508531 ALOX15P16050 662 aaPredicted RBP5.27□□□□□ -1.57
PDLIM5-211ENST00000508531 ECHS1P30084 290 aa5.27□□□□□ -1.57
PDLIM5-211ENST00000508531 MPLP40238 635 aa5.27□□□□□ -1.57
PDLIM5-211ENST00000508531 MRPS9P82933 396 aaKnown RBP5.27□□□□□ -1.57
PDLIM5-211ENST00000508531 HNRNPA0Q13151 305 aaKnown RBP5.27□□□□□ -1.57
PDLIM5-211ENST00000508531 WDR43Q15061 677 aaKnown RBP eCLIP5.27□□□□□ -1.57
PDLIM5-211ENST00000508531 SPDYE7PQ495Y7 208 aa5.27□□□□□ -1.57
PDLIM5-211ENST00000508531 RRP12Q5JTH9 1297 aaKnown RBP5.27□□□□□ -1.57
PDLIM5-211ENST00000508531 AFMIDQ63HM1 303 aa5.27□□□□□ -1.57
PDLIM5-211ENST00000508531 ARMC6Q6NXE6 501 aa5.27□□□□□ -1.57
PDLIM5-211ENST00000508531 ADAMTS13Q76LX8 1427 aa5.27□□□□□ -1.57
PDLIM5-211ENST00000508531 THNSL2Q86YJ6 484 aa5.27□□□□□ -1.57
PDLIM5-211ENST00000508531 TMEM132CQ8N3T6 1108 aa5.27□□□□□ -1.57
PDLIM5-211ENST00000508531 UBR7Q8N806 425 aa5.27□□□□□ -1.57
PDLIM5-211ENST00000508531 STON2Q8WXE9 905 aa5.27□□□□□ -1.57
PDLIM5-211ENST00000508531 FUBP3Q96I24 572 aaKnown RBP eCLIP5.27□□□□□ -1.57
PDLIM5-211ENST00000508531 Q96MF0 132 aa5.27□□□□□ -1.57
PDLIM5-211ENST00000508531 MRI1Q9BV20 369 aa5.27□□□□□ -1.57
PDLIM5-211ENST00000508531 ADGRL3Q9HAR2 1447 aa5.27□□□□□ -1.57
PDLIM5-211ENST00000508531 APOBEC2Q9Y235 224 aaKnown RBP5.27□□□□□ -1.57
PDLIM5-211ENST00000508531 NOX1Q9Y5S8 564 aa5.27□□□□□ -1.57
PDLIM5-211ENST00000508531 ANKRD36BQ8N2N9 1353 aa5.27□□□□□ -1.57
PDLIM5-211ENST00000508531 C1orf167Q5SNV9 1468 aa5.26□□□□□ -1.57
PDLIM5-211ENST00000508531 SALL3Q9BXA9 1300 aa5.26□□□□□ -1.57
PDLIM5-211ENST00000508531 UNC13BO14795 1591 aa5.26□□□□□ -1.57
PDLIM5-211ENST00000508531 A0A1B0GUL7 405 aa5.26□□□□□ -1.57
PDLIM5-211ENST00000508531 GOLGA8AA7E2F4 631 aa5.26□□□□□ -1.57
PDLIM5-211ENST00000508531 ATP8B1O43520 1251 aa5.26□□□□□ -1.57
PDLIM5-211ENST00000508531 BAG4O95429 457 aaKnown RBP5.26□□□□□ -1.57
PDLIM5-211ENST00000508531 IVLP07476 585 aa5.26□□□□□ -1.57
PDLIM5-211ENST00000508531 CT47B1P0C2W7 299 aaPredicted RBP5.26□□□□□ -1.57
PDLIM5-211ENST00000508531 FDXRP22570 491 aa5.26□□□□□ -1.57
PDLIM5-211ENST00000508531 CASQ1P31415 396 aa5.26□□□□□ -1.57
PDLIM5-211ENST00000508531 SREBF1P36956 1147 aa5.26□□□□□ -1.57
PDLIM5-211ENST00000508531 GYS2P54840 703 aa5.26□□□□□ -1.57
PDLIM5-211ENST00000508531 PER3P56645 1201 aa5.26□□□□□ -1.57
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms