RNA–Protein interactions for RNA: ENST00000507009.5

GYPB-208, Transcript of glycophorin B (MNS blood group), humanhuman

TSL 1 (best)

Gene GYPB, Length 388 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GYPB-208ENST00000507009 WDR5BQ86VZ2 330 aa6.29□□□□□ -1.4
GYPB-208ENST00000507009 ARID3BQ8IVW6 561 aaPredicted RBP6.29□□□□□ -1.4
GYPB-208ENST00000507009 TTC9BQ8N6N2 239 aa6.29□□□□□ -1.4
GYPB-208ENST00000507009 APPL2Q8NEU8 664 aa6.29□□□□□ -1.4
GYPB-208ENST00000507009 TNFRSF25Q93038 417 aa6.29□□□□□ -1.4
GYPB-208ENST00000507009 TCEAL3Q969E4 200 aa6.29□□□□□ -1.4
GYPB-208ENST00000507009 ZBTB45Q96K62 511 aaPredicted RBP6.29□□□□□ -1.4
GYPB-208ENST00000507009 ACAP3Q96P50 834 aa6.29□□□□□ -1.4
GYPB-208ENST00000507009 MTMR9Q96QG7 549 aa6.29□□□□□ -1.4
GYPB-208ENST00000507009 SPSB2Q99619 263 aa6.29□□□□□ -1.4
GYPB-208ENST00000507009 ACO2Q99798 780 aaKnown RBP6.29□□□□□ -1.4
GYPB-208ENST00000507009 MRPL4Q9BYD3 311 aaKnown RBP6.29□□□□□ -1.4
GYPB-208ENST00000507009 BHMT2Q9H2M3 363 aa6.29□□□□□ -1.4
GYPB-208ENST00000507009 ATXN3LQ9H3M9 355 aa6.29□□□□□ -1.4
GYPB-208ENST00000507009 C8orf33Q9H7E9 229 aaPredicted RBP6.29□□□□□ -1.4
GYPB-208ENST00000507009 SLC8A2Q9UPR5 921 aa6.29□□□□□ -1.4
GYPB-208ENST00000507009 TNFSF13BQ9Y275 285 aa6.29□□□□□ -1.4
GYPB-208ENST00000507009 INVSQ9Y283 1065 aa6.29□□□□□ -1.4
GYPB-208ENST00000507009 ZFHX4Q86UP3 3567 aa6.29□□□□□ -1.4
GYPB-208ENST00000507009 ATG2BQ96BY7 2078 aa6.29□□□□□ -1.4
GYPB-208ENST00000507009 PHLPP2Q6ZVD8 1323 aa6.28□□□□□ -1.4
GYPB-208ENST00000507009 SFI1A8K8P3 1242 aa6.28□□□□□ -1.4
GYPB-208ENST00000507009 ARNTLO00327 626 aa6.28□□□□□ -1.4
GYPB-208ENST00000507009 GIPC1O14908 333 aa6.28□□□□□ -1.4
GYPB-208ENST00000507009 SLC16A4O15374 487 aa6.28□□□□□ -1.4
GYPB-208ENST00000507009 JAK2O60674 1132 aa6.28□□□□□ -1.4
GYPB-208ENST00000507009 MICAL2O94851 1124 aa6.28□□□□□ -1.4
GYPB-208ENST00000507009 LARGE1O95461 756 aa6.28□□□□□ -1.4
GYPB-208ENST00000507009 PRAMEF12O95522 483 aa6.28□□□□□ -1.4
GYPB-208ENST00000507009 OR52Z1P0C646 297 aa6.28□□□□□ -1.4
GYPB-208ENST00000507009 FDPSP14324 419 aaKnown RBP6.28□□□□□ -1.4
GYPB-208ENST00000507009 U2AF2P26368 475 aaKnown RBP eCLIP6.28□□□□□ -1.4
GYPB-208ENST00000507009 RPA1P27694 616 aa6.28□□□□□ -1.4
GYPB-208ENST00000507009 GABRR2P28476 465 aa6.28□□□□□ -1.4
GYPB-208ENST00000507009 PMLP29590 882 aa6.28□□□□□ -1.4
GYPB-208ENST00000507009 GBP1P32455 592 aa6.28□□□□□ -1.4
GYPB-208ENST00000507009 MPLP40238 635 aa6.28□□□□□ -1.4
GYPB-208ENST00000507009 NPTX2P47972 431 aa6.28□□□□□ -1.4
GYPB-208ENST00000507009 NOVA1P51513 510 aaKnown RBP6.28□□□□□ -1.4
GYPB-208ENST00000507009 GUCY2FP51841 1108 aa6.28□□□□□ -1.4
GYPB-208ENST00000507009 PRR20EP86478 221 aa6.28□□□□□ -1.4
GYPB-208ENST00000507009 PRR20CP86479 221 aa6.28□□□□□ -1.4
GYPB-208ENST00000507009 PRR20DP86480 221 aa6.28□□□□□ -1.4
GYPB-208ENST00000507009 PRR20BP86481 221 aa6.28□□□□□ -1.4
GYPB-208ENST00000507009 PRR20AP86496 221 aa6.28□□□□□ -1.4
GYPB-208ENST00000507009 CREB5Q02930 508 aa6.28□□□□□ -1.4
GYPB-208ENST00000507009 RAD51AP2Q09MP3 1159 aa6.28□□□□□ -1.4
GYPB-208ENST00000507009 PSMD2Q13200 908 aa6.28□□□□□ -1.4
GYPB-208ENST00000507009 PLD1Q13393 1074 aa6.28□□□□□ -1.4
GYPB-208ENST00000507009 GNL2Q13823 731 aaKnown RBP6.28□□□□□ -1.4
GYPB-208ENST00000507009 MRPL58Q14197 206 aaKnown RBP6.28□□□□□ -1.4
GYPB-208ENST00000507009 TAF12Q16514 161 aa6.28□□□□□ -1.4
GYPB-208ENST00000507009 ECM1Q16610 540 aa6.28□□□□□ -1.4
GYPB-208ENST00000507009 ARHGAP29Q52LW3 1261 aa6.28□□□□□ -1.4
GYPB-208ENST00000507009 ARHGAP15Q53QZ3 475 aa6.28□□□□□ -1.4
GYPB-208ENST00000507009 DGKKQ5KSL6 1271 aa6.28□□□□□ -1.4
GYPB-208ENST00000507009 RNF43Q68DV7 783 aa6.28□□□□□ -1.4
GYPB-208ENST00000507009 MPZL3Q6UWV2 235 aa6.28□□□□□ -1.4
GYPB-208ENST00000507009 USP37Q86T82 979 aa6.28□□□□□ -1.4
GYPB-208ENST00000507009 TTC30AQ86WT1 665 aa6.28□□□□□ -1.4
GYPB-208ENST00000507009 RALGPS2Q86X27 583 aaPredicted RBP6.28□□□□□ -1.4
GYPB-208ENST00000507009 TMC8Q8IU68 726 aa6.28□□□□□ -1.4
GYPB-208ENST00000507009 LEMD2Q8NC56 503 aa6.28□□□□□ -1.4
GYPB-208ENST00000507009 GIPC2Q8TF65 315 aa6.28□□□□□ -1.4
GYPB-208ENST00000507009 GAB3Q8WWW8 586 aa6.28□□□□□ -1.4
GYPB-208ENST00000507009 KIFAP3Q92845 792 aa6.28□□□□□ -1.4
GYPB-208ENST00000507009 E2F7Q96AV8 911 aa6.28□□□□□ -1.4
GYPB-208ENST00000507009 SUSD3Q96L08 255 aa6.28□□□□□ -1.4
GYPB-208ENST00000507009 GCNAQ96QF7 691 aa6.28□□□□□ -1.4
GYPB-208ENST00000507009 HHIPQ96QV1 700 aa6.28□□□□□ -1.4
GYPB-208ENST00000507009 TMEM209Q96SK2 561 aa6.28□□□□□ -1.4
GYPB-208ENST00000507009 SEPT5Q99719 369 aaPredicted RBP6.28□□□□□ -1.4
GYPB-208ENST00000507009 POLR3CQ9BUI4 534 aaPredicted RBP6.28□□□□□ -1.4
GYPB-208ENST00000507009 EDEM2Q9BV94 578 aa6.28□□□□□ -1.4
GYPB-208ENST00000507009 TM6SF1Q9BZW5 370 aa6.28□□□□□ -1.4
GYPB-208ENST00000507009 GPR88Q9GZN0 384 aa6.28□□□□□ -1.4
GYPB-208ENST00000507009 CRISPLD1Q9H336 500 aa6.28□□□□□ -1.4
GYPB-208ENST00000507009 TRPV5Q9NQA5 729 aa6.28□□□□□ -1.4
GYPB-208ENST00000507009 KMT5AQ9NQR1 393 aa6.28□□□□□ -1.4
GYPB-208ENST00000507009 GKN1Q9NS71 199 aa6.28□□□□□ -1.4
GYPB-208ENST00000507009 DDX19AQ9NUU7 478 aaKnown RBP6.28□□□□□ -1.4
GYPB-208ENST00000507009 DAXXQ9UER7 740 aaPredicted RBP6.28□□□□□ -1.4
GYPB-208ENST00000507009 ZMIZ1Q9ULJ6 1067 aa6.28□□□□□ -1.4
GYPB-208ENST00000507009 KIAA1024Q9UPX6 916 aa6.28□□□□□ -1.4
GYPB-208ENST00000507009 CFAP47Q6ZTR5 3102 aa6.28□□□□□ -1.4
GYPB-208ENST00000507009 NUP210Q8TEM1 1887 aaPredicted RBP6.28□□□□□ -1.4
GYPB-208ENST00000507009 F5P12259 2224 aa6.27□□□□□ -1.4
GYPB-208ENST00000507009 SDK1Q7Z5N4 2213 aa6.27□□□□□ -1.4
GYPB-208ENST00000507009 CHD6Q8TD26 2715 aa6.27□□□□□ -1.41
GYPB-208ENST00000507009 MYBPHLA2RUH7 354 aa6.27□□□□□ -1.41
GYPB-208ENST00000507009 E9PMD0 336 aa6.27□□□□□ -1.41
GYPB-208ENST00000507009 DCLK1O15075 740 aa6.27□□□□□ -1.41
GYPB-208ENST00000507009 FOXD2O60548 495 aaPredicted RBP6.27□□□□□ -1.41
GYPB-208ENST00000507009 HIP1RO75146 1068 aa6.27□□□□□ -1.41
GYPB-208ENST00000507009 EPN2O95208 641 aa6.27□□□□□ -1.41
GYPB-208ENST00000507009 KCNK5O95279 499 aa6.27□□□□□ -1.41
GYPB-208ENST00000507009 TOP3BO95985 862 aaKnown RBP6.27□□□□□ -1.41
GYPB-208ENST00000507009 PROS1P07225 676 aa6.27□□□□□ -1.41
GYPB-208ENST00000507009 ZNF806P0C7X5 589 aa6.27□□□□□ -1.41
GYPB-208ENST00000507009 CXCL8P10145 99 aa6.27□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 16.8 ms