RNA–Protein interactions for RNA: ENST00000506941.1

NPHP4-210, Transcript of nephrocystin 4, humanhuman

TSL 4

Gene NPHP4, Length 570 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP4-210ENST00000506941 IL9P15248 144 aa19.51■□□□□ 0.71
NPHP4-210ENST00000506941 ATICP31939 592 aa19.51■□□□□ 0.71
NPHP4-210ENST00000506941 PIK3CAP42336 1068 aa19.51■□□□□ 0.71
NPHP4-210ENST00000506941 ZNF699Q32M78 642 aa19.51■□□□□ 0.71
NPHP4-210ENST00000506941 WDR72Q3MJ13 1102 aa19.51■□□□□ 0.71
NPHP4-210ENST00000506941 DCAF17Q5H9S7 520 aaPredicted RBP19.51■□□□□ 0.71
NPHP4-210ENST00000506941 TMC5Q6UXY8 1006 aa19.51■□□□□ 0.71
NPHP4-210ENST00000506941 RNF19BQ6ZMZ0 732 aa19.51■□□□□ 0.71
NPHP4-210ENST00000506941 FRMD5Q7Z6J6 570 aa19.51■□□□□ 0.71
NPHP4-210ENST00000506941 METTL23Q86XA0 190 aa19.51■□□□□ 0.71
NPHP4-210ENST00000506941 ADGRF2Q8IZF7 708 aa19.51■□□□□ 0.71
NPHP4-210ENST00000506941 KBTBD7Q8WVZ9 684 aa19.51■□□□□ 0.71
NPHP4-210ENST00000506941 SUSD6Q92537 303 aa19.51■□□□□ 0.71
NPHP4-210ENST00000506941 SLC35C1Q96A29 364 aa19.51■□□□□ 0.71
NPHP4-210ENST00000506941 SYAP1Q96A49 352 aaPredicted RBP19.51■□□□□ 0.71
NPHP4-210ENST00000506941 OXCT2Q9BYC2 517 aaPredicted RBP19.51■□□□□ 0.71
NPHP4-210ENST00000506941 VRTNQ9H8Y1 702 aa19.51■□□□□ 0.71
NPHP4-210ENST00000506941 TMEM8AQ9HCN3 771 aa19.51■□□□□ 0.71
NPHP4-210ENST00000506941 POLIQ9UNA4 740 aa19.51■□□□□ 0.71
NPHP4-210ENST00000506941 NCOR1O75376 2440 aa19.51■□□□□ 0.71
NPHP4-210ENST00000506941 LRRN2O75325 713 aa19.5■□□□□ 0.71
NPHP4-210ENST00000506941 PAPLNO95428 1278 aa19.5■□□□□ 0.71
NPHP4-210ENST00000506941 GTF2H1P32780 548 aa19.5■□□□□ 0.71
NPHP4-210ENST00000506941 SMAD2Q15796 467 aaKnown RBP19.5■□□□□ 0.71
NPHP4-210ENST00000506941 CCDC40Q4G0X9 1142 aa19.5■□□□□ 0.71
NPHP4-210ENST00000506941 CBWD6Q4V339 395 aa19.5■□□□□ 0.71
NPHP4-210ENST00000506941 TJAP1Q5JTD0 557 aa19.5■□□□□ 0.71
NPHP4-210ENST00000506941 CBWD3Q5JTY5 395 aa19.5■□□□□ 0.71
NPHP4-210ENST00000506941 CBWD5Q5RIA9 395 aa19.5■□□□□ 0.71
NPHP4-210ENST00000506941 TCERG1LQ5VWI1 586 aa19.5■□□□□ 0.71
NPHP4-210ENST00000506941 TMEM86AQ8N2M4 240 aa19.5■□□□□ 0.71
NPHP4-210ENST00000506941 SLC7A14Q8TBB6 771 aa19.5■□□□□ 0.71
NPHP4-210ENST00000506941 ZNF707Q96C28 371 aaPredicted RBP19.5■□□□□ 0.71
NPHP4-210ENST00000506941 ADAM7Q9H2U9 754 aa19.5■□□□□ 0.71
NPHP4-210ENST00000506941 DENND4CQ5VZ89 1909 aa19.5■□□□□ 0.71
NPHP4-210ENST00000506941 OBSL1O75147 1896 aa19.5■□□□□ 0.71
NPHP4-210ENST00000506941 BDP1A6H8Y1 2624 aa19.49■□□□□ 0.71
NPHP4-210ENST00000506941 MUC3AQ02505 3323 aa19.49■□□□□ 0.71
NPHP4-210ENST00000506941 SPDYE4A6NLX3 237 aa19.49■□□□□ 0.71
NPHP4-210ENST00000506941 GABRDO14764 452 aa19.49■□□□□ 0.71
NPHP4-210ENST00000506941 ZMYND10O75800 440 aa19.49■□□□□ 0.71
NPHP4-210ENST00000506941 SEC24AO95486 1093 aa19.49■□□□□ 0.71
NPHP4-210ENST00000506941 ASS1P00966 412 aaKnown RBP19.49■□□□□ 0.71
NPHP4-210ENST00000506941 C8AP07357 584 aa19.49■□□□□ 0.71
NPHP4-210ENST00000506941 ATF2P15336 505 aa19.49■□□□□ 0.71
NPHP4-210ENST00000506941 MXI1P50539 228 aa19.49■□□□□ 0.71
NPHP4-210ENST00000506941 CDR1P51861 262 aa19.49■□□□□ 0.71
NPHP4-210ENST00000506941 ITIH3Q06033 890 aa19.49■□□□□ 0.71
NPHP4-210ENST00000506941 GPR17Q13304 367 aa19.49■□□□□ 0.71
NPHP4-210ENST00000506941 PUS10Q3MIT2 529 aaKnown RBP19.49■□□□□ 0.71
NPHP4-210ENST00000506941 TPGS2Q68CL5 300 aa19.49■□□□□ 0.71
NPHP4-210ENST00000506941 KRT39Q6A163 491 aa19.49■□□□□ 0.71
NPHP4-210ENST00000506941 SPOPLQ6IQ16 392 aa19.49■□□□□ 0.71
NPHP4-210ENST00000506941 CAVIN1Q6NZI2 390 aaKnown RBP19.49■□□□□ 0.71
NPHP4-210ENST00000506941 DPH6Q7L8W6 267 aa19.49■□□□□ 0.71
NPHP4-210ENST00000506941 CMASQ8NFW8 434 aaPredicted RBP19.49■□□□□ 0.71
NPHP4-210ENST00000506941 SEMA4DQ92854 862 aa19.49■□□□□ 0.71
NPHP4-210ENST00000506941 MMS19Q96T76 1030 aa19.49■□□□□ 0.71
NPHP4-210ENST00000506941 MRPL45Q9BRJ2 306 aaKnown RBP19.49■□□□□ 0.71
NPHP4-210ENST00000506941 PI4K2AQ9BTU6 479 aa19.49■□□□□ 0.71
NPHP4-210ENST00000506941 ZCWPW1Q9H0M4 648 aa19.49■□□□□ 0.71
NPHP4-210ENST00000506941 METTL14Q9HCE5 456 aaKnown RBP19.49■□□□□ 0.71
NPHP4-210ENST00000506941 UTP3Q9NQZ2 479 aaKnown RBP eCLIP19.49■□□□□ 0.71
NPHP4-210ENST00000506941 DDX43Q9NXZ2 648 aaKnown RBP19.49■□□□□ 0.71
NPHP4-210ENST00000506941 NXF1Q9UBU9 619 aaKnown RBP19.49■□□□□ 0.71
NPHP4-210ENST00000506941 DPP7Q9UHL4 492 aa19.49■□□□□ 0.71
NPHP4-210ENST00000506941 NME7Q9Y5B8 376 aa19.49■□□□□ 0.71
NPHP4-210ENST00000506941 ZNF638Q14966 1978 aaKnown RBP19.48■□□□□ 0.71
NPHP4-210ENST00000506941 CCDC195A0A1B0GUA6 201 aa19.48■□□□□ 0.71
NPHP4-210ENST00000506941 STX10O60499 249 aa19.48■□□□□ 0.71
NPHP4-210ENST00000506941 ACAT1P24752 427 aaKnown RBP19.48■□□□□ 0.71
NPHP4-210ENST00000506941 ERCC5P28715 1186 aaPredicted RBP19.48■□□□□ 0.71
NPHP4-210ENST00000506941 MARSP56192 900 aaKnown RBP19.48■□□□□ 0.71
NPHP4-210ENST00000506941 TNNC1P63316 161 aa19.48■□□□□ 0.71
NPHP4-210ENST00000506941 ADCY1Q08828 1119 aa19.48■□□□□ 0.71
NPHP4-210ENST00000506941 CCDC142Q17RM4 750 aa19.48■□□□□ 0.71
NPHP4-210ENST00000506941 SGSM1Q2NKQ1 1148 aa19.48■□□□□ 0.71
NPHP4-210ENST00000506941 ZNF667Q5HYK9 610 aa19.48■□□□□ 0.71
NPHP4-210ENST00000506941 LIN9Q5TKA1 542 aa19.48■□□□□ 0.71
NPHP4-210ENST00000506941 ELMSAN1Q6PJG2 1045 aa19.48■□□□□ 0.71
NPHP4-210ENST00000506941 SCARA5Q6ZMJ2 495 aa19.48■□□□□ 0.71
NPHP4-210ENST00000506941 GPR149Q86SP6 731 aa19.48■□□□□ 0.71
NPHP4-210ENST00000506941 LRRTM3Q86VH5 581 aa19.48■□□□□ 0.71
NPHP4-210ENST00000506941 IRF2BP1Q8IU81 584 aa19.48■□□□□ 0.71
NPHP4-210ENST00000506941 TRIM59Q8IWR1 403 aa19.48■□□□□ 0.71
NPHP4-210ENST00000506941 THEM5Q8N1Q8 247 aa19.48■□□□□ 0.71
NPHP4-210ENST00000506941 SPATA18Q8TC71 538 aa19.48■□□□□ 0.71
NPHP4-210ENST00000506941 PGLYRP2Q96PD5 576 aa19.48■□□□□ 0.71
NPHP4-210ENST00000506941 CRISPLD1Q9H336 500 aa19.48■□□□□ 0.71
NPHP4-210ENST00000506941 SMYD3Q9H7B4 428 aa19.48■□□□□ 0.71
NPHP4-210ENST00000506941 APOBEC3GQ9HC16 384 aaKnown RBP19.48■□□□□ 0.71
NPHP4-210ENST00000506941 ZDHHC7Q9NXF8 308 aa19.48■□□□□ 0.71
NPHP4-210ENST00000506941 AFF4Q9UHB7 1163 aaKnown RBP19.48■□□□□ 0.71
NPHP4-210ENST00000506941 DACH1Q9UI36 760 aa19.48■□□□□ 0.71
NPHP4-210ENST00000506941 MTMR11A4FU01 709 aa19.47■□□□□ 0.71
NPHP4-210ENST00000506941 WARSP23381 471 aaKnown RBP19.47■□□□□ 0.71
NPHP4-210ENST00000506941 LMO2P25791 158 aa19.47■□□□□ 0.71
NPHP4-210ENST00000506941 RAP1GAPP47736 663 aa19.47■□□□□ 0.71
NPHP4-210ENST00000506941 KLHL40Q2TBA0 621 aa19.47■□□□□ 0.71
NPHP4-210ENST00000506941 SLC39A12Q504Y0 691 aa19.47■□□□□ 0.71
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms