RNA–Protein interactions for RNA: ENST00000504531.2

CASC9-201, Transcript of cancer susceptibility 9, humanhuman

TSL 1 (best) BASIC

Gene CASC9, Length 1,164 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASC9-201ENST00000504531 SLC1A1P43005 524 aa9.42□□□□□ -0.9
CASC9-201ENST00000504531 FNTAP49354 379 aa9.42□□□□□ -0.9
CASC9-201ENST00000504531 MXI1P50539 228 aa9.42□□□□□ -0.9
CASC9-201ENST00000504531 CYP2J2P51589 502 aa9.42□□□□□ -0.9
CASC9-201ENST00000504531 ITGB3BPQ13352 177 aaPredicted RBP9.42□□□□□ -0.9
CASC9-201ENST00000504531 PGM5Q15124 567 aa9.42□□□□□ -0.9
CASC9-201ENST00000504531 FAM153CQ494X1 144 aa9.42□□□□□ -0.9
CASC9-201ENST00000504531 C1orf220Q5T0J3 134 aa9.42□□□□□ -0.9
CASC9-201ENST00000504531 CYFIP1Q7L576 1253 aa9.42□□□□□ -0.9
CASC9-201ENST00000504531 VSIG10LQ86VR7 867 aa9.42□□□□□ -0.9
CASC9-201ENST00000504531 IL22RA1Q8N6P7 574 aa9.42□□□□□ -0.9
CASC9-201ENST00000504531 TMEM161BQ8NDZ6 487 aa9.42□□□□□ -0.9
CASC9-201ENST00000504531 PARD3BQ8TEW8 1205 aa9.42□□□□□ -0.9
CASC9-201ENST00000504531 PPM1EQ8WY54 764 aa9.42□□□□□ -0.9
CASC9-201ENST00000504531 CD101Q93033 1021 aa9.42□□□□□ -0.9
CASC9-201ENST00000504531 ATP6V0A1Q93050 837 aa9.42□□□□□ -0.9
CASC9-201ENST00000504531 ARL8AQ96BM9 186 aa9.42□□□□□ -0.9
CASC9-201ENST00000504531 PGM2Q96G03 612 aa9.42□□□□□ -0.9
CASC9-201ENST00000504531 VCPIP1Q96JH7 1222 aa9.42□□□□□ -0.9
CASC9-201ENST00000504531 CAPNS2Q96L46 248 aa9.42□□□□□ -0.9
CASC9-201ENST00000504531 RNPC3Q96LT9 517 aaKnown RBP9.42□□□□□ -0.9
CASC9-201ENST00000504531 PSMB7Q99436 277 aa9.42□□□□□ -0.9
CASC9-201ENST00000504531 MOV10L1Q9BXT6 1211 aaKnown RBP9.42□□□□□ -0.9
CASC9-201ENST00000504531 AS3MTQ9HBK9 375 aa9.42□□□□□ -0.9
CASC9-201ENST00000504531 HOMER3Q9NSC5 361 aa9.42□□□□□ -0.9
CASC9-201ENST00000504531 EHD2Q9NZN4 543 aa9.42□□□□□ -0.9
CASC9-201ENST00000504531 FAM153AQ9UHL3 310 aa9.42□□□□□ -0.9
CASC9-201ENST00000504531 ZNF112Q9UJU3 913 aa9.42□□□□□ -0.9
CASC9-201ENST00000504531 NOCTQ9UK39 431 aaKnown RBP9.42□□□□□ -0.9
CASC9-201ENST00000504531 MTUS1Q9ULD2 1270 aa9.42□□□□□ -0.9
CASC9-201ENST00000504531 TBX20Q9UMR3 447 aa9.42□□□□□ -0.9
CASC9-201ENST00000504531 TRIM33Q9UPN9 1127 aa9.42□□□□□ -0.9
CASC9-201ENST00000504531 ALG6Q9Y672 507 aa9.42□□□□□ -0.9
CASC9-201ENST00000504531 STYXL1Q9Y6J8 313 aa9.42□□□□□ -0.9
CASC9-201ENST00000504531 SMCHD1A6NHR9 2005 aa9.41□□□□□ -0.9
CASC9-201ENST00000504531 ZNF541Q9H0D2 1346 aa9.41□□□□□ -0.9
CASC9-201ENST00000504531 C19orf81C9J6K1 198 aa9.41□□□□□ -0.9
CASC9-201ENST00000504531 FAM229AH3BQW9 127 aa9.41□□□□□ -0.9
CASC9-201ENST00000504531 WNT10BO00744 389 aa9.41□□□□□ -0.9
CASC9-201ENST00000504531 CHMP2AO43633 222 aa9.41□□□□□ -0.9
CASC9-201ENST00000504531 PIGRP01833 764 aa9.41□□□□□ -0.9
CASC9-201ENST00000504531 FTLP02792 175 aaPredicted RBP9.41□□□□□ -0.9
CASC9-201ENST00000504531 ALAS1P13196 640 aa9.41□□□□□ -0.9
CASC9-201ENST00000504531 CNGA1P29973 690 aa9.41□□□□□ -0.9
CASC9-201ENST00000504531 CCND2P30279 289 aa9.41□□□□□ -0.9
CASC9-201ENST00000504531 PEX5P50542 639 aa9.41□□□□□ -0.9
CASC9-201ENST00000504531 CDR2Q01850 454 aa9.41□□□□□ -0.9
CASC9-201ENST00000504531 CAV1Q03135 178 aa9.41□□□□□ -0.9
CASC9-201ENST00000504531 PPP3CAQ08209 521 aa9.41□□□□□ -0.9
CASC9-201ENST00000504531 DMP1Q13316 513 aaPredicted RBP9.41□□□□□ -0.9
CASC9-201ENST00000504531 BYSLQ13895 437 aaKnown RBP9.41□□□□□ -0.9
CASC9-201ENST00000504531 HLTFQ14527 1009 aaKnown RBP eCLIP9.41□□□□□ -0.9
CASC9-201ENST00000504531 COG2Q14746 738 aa9.41□□□□□ -0.9
CASC9-201ENST00000504531 SLMAPQ14BN4 828 aa9.41□□□□□ -0.9
CASC9-201ENST00000504531 DCAF15Q66K64 600 aa9.41□□□□□ -0.9
CASC9-201ENST00000504531 CIAPIN1Q6FI81 312 aa9.41□□□□□ -0.9
CASC9-201ENST00000504531 CYP4F22Q6NT55 531 aa9.41□□□□□ -0.9
CASC9-201ENST00000504531 TRIM72Q6ZMU5 477 aa9.41□□□□□ -0.9
CASC9-201ENST00000504531 C15orf39Q6ZRI6 1047 aa9.41□□□□□ -0.9
CASC9-201ENST00000504531 CEP128Q6ZU80 1094 aa9.41□□□□□ -0.9
CASC9-201ENST00000504531 TMC3Q7Z5M5 1100 aa9.41□□□□□ -0.9
CASC9-201ENST00000504531 HOOK3Q86VS8 718 aa9.41□□□□□ -0.9
CASC9-201ENST00000504531 KLHL7Q8IXQ5 586 aa9.41□□□□□ -0.9
CASC9-201ENST00000504531 GSPT2Q8IYD1 628 aaKnown RBP9.41□□□□□ -0.9
CASC9-201ENST00000504531 FBXL13Q8NEE6 735 aa9.41□□□□□ -0.9
CASC9-201ENST00000504531 BCAS4Q8TDM0 211 aa9.41□□□□□ -0.9
CASC9-201ENST00000504531 RIN2Q8WYP3 895 aaPredicted RBP9.41□□□□□ -0.9
CASC9-201ENST00000504531 TEPSINQ96N21 525 aa9.41□□□□□ -0.9
CASC9-201ENST00000504531 ZSWIM1Q9BR11 485 aa9.41□□□□□ -0.9
CASC9-201ENST00000504531 PDCD2LQ9BRP1 358 aa9.41□□□□□ -0.9
CASC9-201ENST00000504531 ROPN1BQ9BZX4 212 aaPredicted RBP9.41□□□□□ -0.9
CASC9-201ENST00000504531 TMEM117Q9H0C3 514 aa9.41□□□□□ -0.9
CASC9-201ENST00000504531 STMN4Q9H169 189 aaPredicted RBP9.41□□□□□ -0.9
CASC9-201ENST00000504531 LRRC19Q9H756 370 aa9.41□□□□□ -0.9
CASC9-201ENST00000504531 ROPN1Q9HAT0 212 aaPredicted RBP9.41□□□□□ -0.9
CASC9-201ENST00000504531 UBE2TQ9NPD8 197 aaPredicted RBP9.41□□□□□ -0.9
CASC9-201ENST00000504531 PXMP2Q9NR77 195 aa9.41□□□□□ -0.9
CASC9-201ENST00000504531 SMARCAL1Q9NZC9 954 aa9.41□□□□□ -0.9
CASC9-201ENST00000504531 COL20A1Q9P218 1284 aa9.41□□□□□ -0.9
CASC9-201ENST00000504531 PLAAQ9Y263 795 aa9.41□□□□□ -0.9
CASC9-201ENST00000504531 PCDHA3Q9Y5H8 950 aa9.41□□□□□ -0.9
CASC9-201ENST00000504531 IGSF9BQ9UPX0 1349 aa9.4□□□□□ -0.9
CASC9-201ENST00000504531 CLRN2A0PK11 232 aa9.4□□□□□ -0.9
CASC9-201ENST00000504531 CCDC169A6NNP5 214 aa9.4□□□□□ -0.9
CASC9-201ENST00000504531 NDC80O14777 642 aa9.4□□□□□ -0.9
CASC9-201ENST00000504531 LDHAP00338 332 aaKnown RBP9.4□□□□□ -0.9
CASC9-201ENST00000504531 FGGP02679 453 aa9.4□□□□□ -0.9
CASC9-201ENST00000504531 PTPRAP18433 802 aa9.4□□□□□ -0.9
CASC9-201ENST00000504531 ICAM3P32942 547 aa9.4□□□□□ -0.9
CASC9-201ENST00000504531 LSP1P33241 339 aa9.4□□□□□ -0.9
CASC9-201ENST00000504531 CTNNA1P35221 906 aaKnown RBP9.4□□□□□ -0.9
CASC9-201ENST00000504531 AP3M2P53677 418 aa9.4□□□□□ -0.9
CASC9-201ENST00000504531 RPS6P62753 249 aaKnown RBP9.4□□□□□ -0.9
CASC9-201ENST00000504531 GNGT1P63211 74 aa9.4□□□□□ -0.9
CASC9-201ENST00000504531 DR1Q01658 176 aa9.4□□□□□ -0.9
CASC9-201ENST00000504531 CXCL9Q07325 125 aa9.4□□□□□ -0.9
CASC9-201ENST00000504531 PRPF4BQ13523 1007 aaKnown RBP9.4□□□□□ -0.9
CASC9-201ENST00000504531 SNRNP35Q16560 246 aaKnown RBP9.4□□□□□ -0.9
CASC9-201ENST00000504531 SLFN12LQ6IEE8 588 aa9.4□□□□□ -0.9
CASC9-201ENST00000504531 ACAD10Q6JQN1 1059 aa9.4□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 19 ms