RNA–Protein interactions for RNA: ENST00000504195.1

HMGB3P17-201, Transcript of high mobility group box 3 pseudogene 17, humanhuman

BASIC

Gene HMGB3P17, Length 649 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P17-201ENST00000504195 MANSC1Q9H8J5 431 aa2.82□□□□□ -1.96
HMGB3P17-201ENST00000504195 DMRT3Q9NQL9 472 aa2.82□□□□□ -1.96
HMGB3P17-201ENST00000504195 RUVBL1Q9Y265 456 aaKnown RBP2.82□□□□□ -1.96
HMGB3P17-201ENST00000504195 TCF20Q9UGU0 1960 aaKnown RBP2.81□□□□□ -1.96
HMGB3P17-201ENST00000504195 TCRBV7S2A1N4TA0A589 114 aa2.81□□□□□ -1.96
HMGB3P17-201ENST00000504195 CDHR4A6H8M9 788 aa2.81□□□□□ -1.96
HMGB3P17-201ENST00000504195 KCNU1A8MYU2 1149 aa2.81□□□□□ -1.96
HMGB3P17-201ENST00000504195 PRRT4C9JH25 899 aa2.81□□□□□ -1.96
HMGB3P17-201ENST00000504195 KIAA0391O15091 583 aaKnown RBP2.81□□□□□ -1.96
HMGB3P17-201ENST00000504195 BRINP1O60477 761 aa2.81□□□□□ -1.96
HMGB3P17-201ENST00000504195 TGFB3P10600 412 aa2.81□□□□□ -1.96
HMGB3P17-201ENST00000504195 PCSK1P29120 753 aa2.81□□□□□ -1.96
HMGB3P17-201ENST00000504195 SRSF2Q01130 221 aaKnown RBP2.81□□□□□ -1.96
HMGB3P17-201ENST00000504195 DAZAP2Q15038 168 aaPredicted RBP2.81□□□□□ -1.96
HMGB3P17-201ENST00000504195 ZNF804AQ7Z570 1209 aa2.81□□□□□ -1.96
HMGB3P17-201ENST00000504195 CAMKK1Q8N5S9 505 aa2.81□□□□□ -1.96
HMGB3P17-201ENST00000504195 DDX55Q8NHQ9 600 aaKnown RBP eCLIP2.81□□□□□ -1.96
HMGB3P17-201ENST00000504195 TBC1D15Q8TC07 691 aa2.81□□□□□ -1.96
HMGB3P17-201ENST00000504195 CCHCR1Q8TD31 782 aa2.81□□□□□ -1.96
HMGB3P17-201ENST00000504195 NR4A3Q92570 626 aa2.81□□□□□ -1.96
HMGB3P17-201ENST00000504195 VCPIP1Q96JH7 1222 aa2.81□□□□□ -1.96
HMGB3P17-201ENST00000504195 TRMOQ9BU70 441 aa2.81□□□□□ -1.96
HMGB3P17-201ENST00000504195 DNAJC28Q9NX36 388 aa2.81□□□□□ -1.96
HMGB3P17-201ENST00000504195 TISP43B9A030 160 aa2.8□□□□□ -1.96
HMGB3P17-201ENST00000504195 E7ENX8 843 aa2.8□□□□□ -1.96
HMGB3P17-201ENST00000504195 DNAJB5O75953 348 aa2.8□□□□□ -1.96
HMGB3P17-201ENST00000504195 FAM163BP0C2L3 166 aa2.8□□□□□ -1.96
HMGB3P17-201ENST00000504195 DDCP20711 480 aa2.8□□□□□ -1.96
HMGB3P17-201ENST00000504195 SOX5P35711 763 aa2.8□□□□□ -1.96
HMGB3P17-201ENST00000504195 SLC6A9P48067 706 aa2.8□□□□□ -1.96
HMGB3P17-201ENST00000504195 HTRA4P83105 476 aaPredicted RBP2.8□□□□□ -1.96
HMGB3P17-201ENST00000504195 TAP2Q03519 686 aa2.8□□□□□ -1.96
HMGB3P17-201ENST00000504195 SLFN5Q08AF3 891 aa2.8□□□□□ -1.96
HMGB3P17-201ENST00000504195 ZNF844Q08AG5 666 aa2.8□□□□□ -1.96
HMGB3P17-201ENST00000504195 MTM1Q13496 603 aa2.8□□□□□ -1.96
HMGB3P17-201ENST00000504195 NPY5RQ15761 445 aa2.8□□□□□ -1.96
HMGB3P17-201ENST00000504195 CATSPERGQ6ZRH7 1159 aa2.8□□□□□ -1.96
HMGB3P17-201ENST00000504195 IRF2BP2Q7Z5L9 587 aa2.8□□□□□ -1.96
HMGB3P17-201ENST00000504195 RNF180Q86T96 592 aa2.8□□□□□ -1.96
HMGB3P17-201ENST00000504195 CMIPQ8IY22 773 aa2.8□□□□□ -1.96
HMGB3P17-201ENST00000504195 NANOGP1Q8N7R0 232 aa2.8□□□□□ -1.96
HMGB3P17-201ENST00000504195 SNX19Q92543 992 aa2.8□□□□□ -1.96
HMGB3P17-201ENST00000504195 THOC3Q96J01 351 aaKnown RBP2.8□□□□□ -1.96
HMGB3P17-201ENST00000504195 C7orf25Q9BPX7 421 aa2.8□□□□□ -1.96
HMGB3P17-201ENST00000504195 SERTAD4Q9NUC0 356 aa2.8□□□□□ -1.96
HMGB3P17-201ENST00000504195 EHD3Q9NZN3 535 aa2.8□□□□□ -1.96
HMGB3P17-201ENST00000504195 DNM3Q9UQ16 869 aa2.8□□□□□ -1.96
HMGB3P17-201ENST00000504195 MYBBP1AQ9BQG0 1328 aaKnown RBP2.79□□□□□ -1.96
HMGB3P17-201ENST00000504195 SMIM35A0A1B0GVV1 85 aa2.79□□□□□ -1.96
HMGB3P17-201ENST00000504195 ENPP3O14638 875 aa2.79□□□□□ -1.96
HMGB3P17-201ENST00000504195 ADAMTS3O15072 1205 aa2.79□□□□□ -1.96
HMGB3P17-201ENST00000504195 HAUS5O94927 633 aa2.79□□□□□ -1.96
HMGB3P17-201ENST00000504195 AMY1AP04745 511 aa2.79□□□□□ -1.96
HMGB3P17-201ENST00000504195 ALPLP05186 524 aa2.79□□□□□ -1.96
HMGB3P17-201ENST00000504195 CENPBP07199 599 aaPredicted RBP2.79□□□□□ -1.96
HMGB3P17-201ENST00000504195 FCER1AP12319 257 aa2.79□□□□□ -1.96
HMGB3P17-201ENST00000504195 PPP3CBP16298 524 aa2.79□□□□□ -1.96
HMGB3P17-201ENST00000504195 CPEP16870 476 aa2.79□□□□□ -1.96
HMGB3P17-201ENST00000504195 NDUFB7P17568 137 aa2.79□□□□□ -1.96
HMGB3P17-201ENST00000504195 ANXA11P50995 505 aaKnown RBP2.79□□□□□ -1.96
HMGB3P17-201ENST00000504195 GYS2P54840 703 aa2.79□□□□□ -1.96
HMGB3P17-201ENST00000504195 BMPR2Q13873 1038 aa2.79□□□□□ -1.96
HMGB3P17-201ENST00000504195 SEPT2Q15019 361 aa2.79□□□□□ -1.96
HMGB3P17-201ENST00000504195 PREPLQ4J6C6 727 aaPredicted RBP2.79□□□□□ -1.96
HMGB3P17-201ENST00000504195 CT47A1Q5JQC4 288 aaPredicted RBP2.79□□□□□ -1.96
HMGB3P17-201ENST00000504195 DACT2Q5SW24 774 aa2.79□□□□□ -1.96
HMGB3P17-201ENST00000504195 GFI1BQ5VTD9 330 aa2.79□□□□□ -1.96
HMGB3P17-201ENST00000504195 SLC29A4Q7RTT9 530 aa2.79□□□□□ -1.96
HMGB3P17-201ENST00000504195 STRA8Q7Z7C7 330 aa2.79□□□□□ -1.96
HMGB3P17-201ENST00000504195 CNGA4Q8IV77 575 aa2.79□□□□□ -1.96
HMGB3P17-201ENST00000504195 ADHFE1Q8IWW8 467 aa2.79□□□□□ -1.96
HMGB3P17-201ENST00000504195 ZGPATQ8N5A5 531 aaKnown RBP2.79□□□□□ -1.96
HMGB3P17-201ENST00000504195 AHCYL2Q96HN2 611 aaKnown RBP2.79□□□□□ -1.96
HMGB3P17-201ENST00000504195 C11orf54Q9H0W9 315 aaPredicted RBP2.79□□□□□ -1.96
HMGB3P17-201ENST00000504195 SLKQ9H2G2 1235 aaPredicted RBP2.79□□□□□ -1.96
HMGB3P17-201ENST00000504195 HIPK2Q9H2X6 1198 aa2.79□□□□□ -1.96
HMGB3P17-201ENST00000504195 CAAP1Q9H8G2 361 aa2.79□□□□□ -1.96
HMGB3P17-201ENST00000504195 C14orf119Q9NWQ9 140 aa2.79□□□□□ -1.96
HMGB3P17-201ENST00000504195 TRNAU1APQ9NX07 287 aaKnown RBP2.79□□□□□ -1.96
HMGB3P17-201ENST00000504195 SH3BP4Q9P0V3 963 aa2.79□□□□□ -1.96
HMGB3P17-201ENST00000504195 CDYLQ9Y232 598 aa2.79□□□□□ -1.96
HMGB3P17-201ENST00000504195 PCDHGA2Q9Y5H1 932 aa2.79□□□□□ -1.96
HMGB3P17-201ENST00000504195 UTP18Q9Y5J1 556 aaKnown RBP eCLIP2.79□□□□□ -1.96
HMGB3P17-201ENST00000504195 E5RJQ4 531 aa2.78□□□□□ -1.96
HMGB3P17-201ENST00000504195 NXPH3O95157 252 aa2.78□□□□□ -1.96
HMGB3P17-201ENST00000504195 EBLN1P0CF75 366 aa2.78□□□□□ -1.96
HMGB3P17-201ENST00000504195 NR2F6P10588 404 aa2.78□□□□□ -1.96
HMGB3P17-201ENST00000504195 MTHFD1P11586 935 aaKnown RBP2.78□□□□□ -1.96
HMGB3P17-201ENST00000504195 OSMP13725 252 aa2.78□□□□□ -1.96
HMGB3P17-201ENST00000504195 GPR3P46089 330 aa2.78□□□□□ -1.96
HMGB3P17-201ENST00000504195 MTNR1BP49286 362 aa2.78□□□□□ -1.96
HMGB3P17-201ENST00000504195 CTXN1P60606 82 aa2.78□□□□□ -1.96
HMGB3P17-201ENST00000504195 ATP8B2P98198 1209 aa2.78□□□□□ -1.96
HMGB3P17-201ENST00000504195 RHDQ02161 417 aa2.78□□□□□ -1.96
HMGB3P17-201ENST00000504195 CD300EQ496F6 205 aaPredicted RBP2.78□□□□□ -1.96
HMGB3P17-201ENST00000504195 ANKRD16Q6P6B7 361 aa2.78□□□□□ -1.96
HMGB3P17-201ENST00000504195 ZNF551Q7Z340 670 aaPredicted RBP2.78□□□□□ -1.96
HMGB3P17-201ENST00000504195 RHOT1Q8IXI2 618 aa2.78□□□□□ -1.96
HMGB3P17-201ENST00000504195 UBR7Q8N806 425 aa2.78□□□□□ -1.96
HMGB3P17-201ENST00000504195 FANCBQ8NB91 859 aa2.78□□□□□ -1.96
Retrieved 100 of 20,778 RNA–protein pairs in 76.2 ms