RNA–Protein interactions for RNA: ENST00000503742.5

UBE2D3-216, Transcript of ubiquitin conjugating enzyme E2 D3, humanhuman

TSL 1 (best)

Gene UBE2D3, Length 1,977 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D3-216ENST00000503742 TWNKQ96RR1 684 aa22.67■■□□□ 1.22
UBE2D3-216ENST00000503742 CELF4Q9BZC1 486 aaKnown RBP22.67■■□□□ 1.22
UBE2D3-216ENST00000503742 CXCL16Q9H2A7 254 aa22.67■■□□□ 1.22
UBE2D3-216ENST00000503742 FAM124BQ9H5Z6 455 aaPredicted RBP22.67■■□□□ 1.22
UBE2D3-216ENST00000503742 C17orf102A2RUQ5 167 aa22.66■■□□□ 1.22
UBE2D3-216ENST00000503742 TLR3O15455 904 aaKnown RBP22.66■■□□□ 1.22
UBE2D3-216ENST00000503742 MED7O43513 233 aa22.66■■□□□ 1.22
UBE2D3-216ENST00000503742 PHF2O75151 1096 aa22.66■■□□□ 1.22
UBE2D3-216ENST00000503742 DENND1BQ6P3S1 775 aa22.66■■□□□ 1.22
UBE2D3-216ENST00000503742 TMEM40Q8WWA1 233 aa22.66■■□□□ 1.22
UBE2D3-216ENST00000503742 DDX27Q96GQ7 796 aaKnown RBP22.66■■□□□ 1.22
UBE2D3-216ENST00000503742 ELOVL4Q9GZR5 314 aa22.66■■□□□ 1.22
UBE2D3-216ENST00000503742 HMGXB4Q9UGU5 601 aa22.66■■□□□ 1.22
UBE2D3-216ENST00000503742 PCNTO95613 3336 aa22.65■■□□□ 1.22
UBE2D3-216ENST00000503742 FAM153BP0C7A2 387 aa22.65■■□□□ 1.22
UBE2D3-216ENST00000503742 CD19P15391 556 aa22.65■■□□□ 1.22
UBE2D3-216ENST00000503742 MAN1A1P33908 653 aa22.65■■□□□ 1.22
UBE2D3-216ENST00000503742 SIX1Q15475 284 aaPredicted RBP22.65■■□□□ 1.22
UBE2D3-216ENST00000503742 ZBTB6Q15916 424 aa22.65■■□□□ 1.22
UBE2D3-216ENST00000503742 CYP1B1Q16678 543 aa22.65■■□□□ 1.22
UBE2D3-216ENST00000503742 FAM153CQ494X1 144 aa22.65■■□□□ 1.22
UBE2D3-216ENST00000503742 ALKAL1Q6UXT8 129 aa22.65■■□□□ 1.22
UBE2D3-216ENST00000503742 ZMAT2Q96NC0 199 aaKnown RBP22.65■■□□□ 1.22
UBE2D3-216ENST00000503742 FAM153AQ9UHL3 310 aa22.65■■□□□ 1.22
UBE2D3-216ENST00000503742 CEP83Q9Y592 693 aa22.65■■□□□ 1.22
UBE2D3-216ENST00000503742 TMEM191CA6NGB0 347 aa22.65■■□□□ 1.22
UBE2D3-216ENST00000503742 CHRNA3P32297 505 aa22.65■■□□□ 1.22
UBE2D3-216ENST00000503742 PTPN11Q06124 597 aaPredicted RBP22.65■■□□□ 1.22
UBE2D3-216ENST00000503742 INCA1Q0VD86 236 aa22.65■■□□□ 1.22
UBE2D3-216ENST00000503742 DHX34Q14147 1143 aaKnown RBP22.65■■□□□ 1.22
UBE2D3-216ENST00000503742 PPP1R15BQ5SWA1 713 aa22.65■■□□□ 1.22
UBE2D3-216ENST00000503742 GADD45GIP1Q8TAE8 222 aaPredicted RBP22.65■■□□□ 1.22
UBE2D3-216ENST00000503742 TMEM176AQ96HP8 235 aa22.65■■□□□ 1.22
UBE2D3-216ENST00000503742 PLVAPQ9BX97 442 aa22.65■■□□□ 1.22
UBE2D3-216ENST00000503742 MED4Q9NPJ6 270 aa22.65■■□□□ 1.22
UBE2D3-216ENST00000503742 TCRBV7S2A1N4TA0A589 114 aa22.64■■□□□ 1.21
UBE2D3-216ENST00000503742 MYADML2A6NDP7 307 aa22.64■■□□□ 1.21
UBE2D3-216ENST00000503742 PSTPIP1O43586 416 aa22.64■■□□□ 1.21
UBE2D3-216ENST00000503742 GJB6O95452 261 aa22.64■■□□□ 1.21
UBE2D3-216ENST00000503742 CYBAP13498 195 aa22.64■■□□□ 1.21
UBE2D3-216ENST00000503742 ERICH1Q86X53 443 aa22.64■■□□□ 1.21
UBE2D3-216ENST00000503742 NME8Q8N427 588 aa22.64■■□□□ 1.21
UBE2D3-216ENST00000503742 MREGQ8N565 214 aa22.64■■□□□ 1.21
UBE2D3-216ENST00000503742 TSEN2Q8NCE0 465 aaKnown RBP22.64■■□□□ 1.21
UBE2D3-216ENST00000503742 PCYOX1Q9UHG3 505 aa22.64■■□□□ 1.21
UBE2D3-216ENST00000503742 FAM187AA6NFU0 413 aa22.63■■□□□ 1.21
UBE2D3-216ENST00000503742 AGPSO00116 658 aa22.63■■□□□ 1.21
UBE2D3-216ENST00000503742 FSCN2O14926 492 aa22.63■■□□□ 1.21
UBE2D3-216ENST00000503742 GNAT1P11488 350 aa22.63■■□□□ 1.21
UBE2D3-216ENST00000503742 GJA9P57773 515 aa22.63■■□□□ 1.21
UBE2D3-216ENST00000503742 RPL7AP62424 266 aaKnown RBP22.63■■□□□ 1.21
UBE2D3-216ENST00000503742 DR1Q01658 176 aa22.63■■□□□ 1.21
UBE2D3-216ENST00000503742 CNTN3Q9P232 1028 aa22.63■■□□□ 1.21
UBE2D3-216ENST00000503742 IP6K2Q9UHH9 426 aa22.63■■□□□ 1.21
UBE2D3-216ENST00000503742 BARX2Q9UMQ3 279 aaPredicted RBP22.63■■□□□ 1.21
UBE2D3-216ENST00000503742 SBDSQ9Y3A5 250 aaKnown RBP eCLIP22.63■■□□□ 1.21
UBE2D3-216ENST00000503742 PDCD11Q14690 1871 aaKnown RBP22.63■■□□□ 1.21
UBE2D3-216ENST00000503742 KPNA6O60684 536 aa22.63■■□□□ 1.21
UBE2D3-216ENST00000503742 SYF2O95926 243 aaKnown RBP22.63■■□□□ 1.21
UBE2D3-216ENST00000503742 PTGIRP43119 386 aa22.63■■□□□ 1.21
UBE2D3-216ENST00000503742 CRYBB1P53674 252 aaPredicted RBP22.63■■□□□ 1.21
UBE2D3-216ENST00000503742 YARSP54577 528 aaKnown RBP22.63■■□□□ 1.21
UBE2D3-216ENST00000503742 FCGRTP55899 365 aa22.63■■□□□ 1.21
UBE2D3-216ENST00000503742 TAS2R40P59535 323 aa22.63■■□□□ 1.21
UBE2D3-216ENST00000503742 FAM193AP78312 1265 aa22.63■■□□□ 1.21
UBE2D3-216ENST00000503742 DNAJC24Q6P3W2 148 aa22.63■■□□□ 1.21
UBE2D3-216ENST00000503742 DDX42Q86XP3 938 aaKnown RBP eCLIP22.63■■□□□ 1.214e-7■■■□□ 18.4
UBE2D3-216ENST00000503742 TTC39CQ8N584 583 aa22.63■■□□□ 1.21
UBE2D3-216ENST00000503742 C7orf31Q8N865 590 aa22.63■■□□□ 1.21
UBE2D3-216ENST00000503742 C3orf20Q8ND61 904 aa22.63■■□□□ 1.21
UBE2D3-216ENST00000503742 FAM71BQ8TC56 605 aa22.63■■□□□ 1.21
UBE2D3-216ENST00000503742 HHIPL1Q96JK4 782 aa22.63■■□□□ 1.21
UBE2D3-216ENST00000503742 ARHGAP39Q9C0H5 1083 aa22.63■■□□□ 1.21
UBE2D3-216ENST00000503742 NXF3Q9H4D5 531 aaKnown RBP22.63■■□□□ 1.21
UBE2D3-216ENST00000503742 CYTH4Q9UIA0 394 aa22.63■■□□□ 1.21
UBE2D3-216ENST00000503742 LCMT1Q9UIC8 334 aa22.63■■□□□ 1.21
UBE2D3-216ENST00000503742 MTUS1Q9ULD2 1270 aa22.63■■□□□ 1.21
UBE2D3-216ENST00000503742 ABT1Q9ULW3 272 aaKnown RBP22.63■■□□□ 1.21
UBE2D3-216ENST00000503742 UTP11Q9Y3A2 253 aaKnown RBP22.63■■□□□ 1.21
UBE2D3-216ENST00000503742 HES2Q9Y543 173 aa22.63■■□□□ 1.21
UBE2D3-216ENST00000503742 SCN1AP35498 2009 aa22.62■■□□□ 1.21
UBE2D3-216ENST00000503742 POLR3GO15318 223 aaPredicted RBP22.62■■□□□ 1.21
UBE2D3-216ENST00000503742 RARAP10276 462 aa22.62■■□□□ 1.21
UBE2D3-216ENST00000503742 PSMC4P43686 418 aa22.62■■□□□ 1.21
UBE2D3-216ENST00000503742 TAP1Q03518 808 aa22.62■■□□□ 1.21
UBE2D3-216ENST00000503742 ORC1Q13415 861 aa22.62■■□□□ 1.21
UBE2D3-216ENST00000503742 PTPN20Q4JDL3 420 aa22.62■■□□□ 1.21
UBE2D3-216ENST00000503742 DAB2IPQ5VWQ8 1189 aa22.62■■□□□ 1.21
UBE2D3-216ENST00000503742 RHOT1Q8IXI2 618 aa22.62■■□□□ 1.21
UBE2D3-216ENST00000503742 C12orf50Q8NA57 414 aaPredicted RBP22.62■■□□□ 1.21
UBE2D3-216ENST00000503742 TRIB2Q92519 343 aa22.62■■□□□ 1.21
UBE2D3-216ENST00000503742 MAGOHBQ96A72 148 aaKnown RBP22.62■■□□□ 1.21
UBE2D3-216ENST00000503742 C18orf8Q96DM3 657 aa22.62■■□□□ 1.21
UBE2D3-216ENST00000503742 GABRQQ9UN88 632 aa22.62■■□□□ 1.21
UBE2D3-216ENST00000503742 SCN10AQ9Y5Y9 1956 aa22.62■■□□□ 1.21
UBE2D3-216ENST00000503742 DAPK3O43293 454 aa22.61■■□□□ 1.21
UBE2D3-216ENST00000503742 RECQL4O94761 1208 aa22.61■■□□□ 1.21
UBE2D3-216ENST00000503742 C6orf222P0C671 652 aaPredicted RBP22.61■■□□□ 1.21
UBE2D3-216ENST00000503742 ZNF252P-AS1Q0IIN9 211 aa22.61■■□□□ 1.21
UBE2D3-216ENST00000503742 HSP90B2PQ58FF3 399 aa22.61■■□□□ 1.21
Retrieved 100 of 20,778 RNA–protein pairs in 63.6 ms