RNA–Protein interactions for RNA: ENST00000502479.1

LINC00939-201, long intergenic non-protein coding RNA 939, humanhuman

TSL 1 (best) BASIC

Gene LINC00939, Length 4,972 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00939-201ENST00000502479 TSHZ1Q6ZSZ6 1077 aa6.8□□□□□ -1.32
LINC00939-201ENST00000502479 PRELID2Q8N945 189 aa6.8□□□□□ -1.32
LINC00939-201ENST00000502479 ZNF398Q8TD17 642 aa6.8□□□□□ -1.32
LINC00939-201ENST00000502479 FAM212AQ96EL1 285 aa6.8□□□□□ -1.32
LINC00939-201ENST00000502479 KREMEN1Q96MU8 473 aa6.8□□□□□ -1.32
LINC00939-201ENST00000502479 SLITRK1Q96PX8 696 aa6.8□□□□□ -1.32
LINC00939-201ENST00000502479 C11orf70Q9BRQ4 267 aa6.8□□□□□ -1.32
LINC00939-201ENST00000502479 TRIM62Q9BVG3 475 aa6.8□□□□□ -1.32
LINC00939-201ENST00000502479 KLC2Q9H0B6 622 aa6.8□□□□□ -1.32
LINC00939-201ENST00000502479 ASB7Q9H672 318 aa6.8□□□□□ -1.32
LINC00939-201ENST00000502479 COL20A1Q9P218 1284 aa6.8□□□□□ -1.32
LINC00939-201ENST00000502479 DDX20Q9UHI6 824 aaKnown RBP6.8□□□□□ -1.32
LINC00939-201ENST00000502479 FAM47DPA6NHR8 397 aa6.79□□□□□ -1.32
LINC00939-201ENST00000502479 SMIM23A6NLE4 172 aa6.79□□□□□ -1.32
LINC00939-201ENST00000502479 E7ENQ6 273 aa6.79□□□□□ -1.32
LINC00939-201ENST00000502479 RARAP10276 462 aa6.79□□□□□ -1.32
LINC00939-201ENST00000502479 KRT15P19012 456 aa6.79□□□□□ -1.32
LINC00939-201ENST00000502479 CDH5P33151 784 aaPredicted RBP6.79□□□□□ -1.32
LINC00939-201ENST00000502479 SKIV2L2P42285 1042 aaKnown RBP6.79□□□□□ -1.32
LINC00939-201ENST00000502479 RBP5P82980 135 aa6.79□□□□□ -1.32
LINC00939-201ENST00000502479 SLC29A2Q14542 456 aa6.79□□□□□ -1.32
LINC00939-201ENST00000502479 TMED2Q15363 201 aa6.79□□□□□ -1.32
LINC00939-201ENST00000502479 P3H1Q32P28 736 aa6.79□□□□□ -1.32
LINC00939-201ENST00000502479 ZC3H12AQ5D1E8 599 aaKnown RBP6.79□□□□□ -1.32
LINC00939-201ENST00000502479 RNF43Q68DV7 783 aa6.79□□□□□ -1.32
LINC00939-201ENST00000502479 TTC19Q6DKK2 380 aaPredicted RBP6.79□□□□□ -1.32
LINC00939-201ENST00000502479 C15orf39Q6ZRI6 1047 aa6.79□□□□□ -1.32
LINC00939-201ENST00000502479 SPATA21Q7Z572 469 aa6.79□□□□□ -1.32
LINC00939-201ENST00000502479 CPA5Q8WXQ8 436 aa6.79□□□□□ -1.32
LINC00939-201ENST00000502479 PCDHB18PQ96TA0 734 aa6.79□□□□□ -1.32
LINC00939-201ENST00000502479 SAYSD1Q9NPB0 183 aa6.79□□□□□ -1.32
LINC00939-201ENST00000502479 CYLDQ9NQC7 956 aa6.79□□□□□ -1.32
LINC00939-201ENST00000502479 KLC4Q9NSK0 619 aa6.79□□□□□ -1.32
LINC00939-201ENST00000502479 FBXO28Q9NVF7 368 aa6.79□□□□□ -1.32
LINC00939-201ENST00000502479 TAS2R14Q9NYV8 317 aa6.79□□□□□ -1.32
LINC00939-201ENST00000502479 RPL26L1Q9UNX3 145 aaKnown RBP6.79□□□□□ -1.32
LINC00939-201ENST00000502479 ARID2Q68CP9 1835 aa6.79□□□□□ -1.32
LINC00939-201ENST00000502479 RRN3P2A6NIE6 340 aa6.79□□□□□ -1.32
LINC00939-201ENST00000502479 PRPF4O43172 522 aaKnown RBP eCLIP6.79□□□□□ -1.32
LINC00939-201ENST00000502479 PRPSAP2O60256 369 aa6.79□□□□□ -1.32
LINC00939-201ENST00000502479 STAU1O95793 577 aaKnown RBP6.79□□□□□ -1.32
LINC00939-201ENST00000502479 CCNE2O96020 404 aa6.79□□□□□ -1.32
LINC00939-201ENST00000502479 ITGA4P13612 1032 aa6.79□□□□□ -1.32
LINC00939-201ENST00000502479 FGFR4P22455 802 aa6.79□□□□□ -1.32
LINC00939-201ENST00000502479 GLRA2P23416 452 aa6.79□□□□□ -1.32
LINC00939-201ENST00000502479 PAX3P23760 479 aa6.79□□□□□ -1.32
LINC00939-201ENST00000502479 ECHS1P30084 290 aa6.79□□□□□ -1.32
LINC00939-201ENST00000502479 TCF7P36402 384 aaPredicted RBP6.79□□□□□ -1.32
LINC00939-201ENST00000502479 PNPLA4P41247 253 aa6.79□□□□□ -1.32
LINC00939-201ENST00000502479 MAGEA4P43358 317 aa6.79□□□□□ -1.32
LINC00939-201ENST00000502479 SERPINB9P50453 376 aa6.79□□□□□ -1.32
LINC00939-201ENST00000502479 NOMO3P69849 1222 aa6.79□□□□□ -1.32
LINC00939-201ENST00000502479 SNX1Q13596 522 aa6.79□□□□□ -1.32
LINC00939-201ENST00000502479 TDRD10Q5VZ19 366 aaKnown RBP6.79□□□□□ -1.32
LINC00939-201ENST00000502479 ADAT2Q7Z6V5 191 aaKnown RBP6.79□□□□□ -1.32
LINC00939-201ENST00000502479 BEST2Q8NFU1 509 aa6.79□□□□□ -1.32
LINC00939-201ENST00000502479 MTBPQ96DY7 904 aa6.79□□□□□ -1.32
LINC00939-201ENST00000502479 TSNARE1Q96NA8 513 aa6.79□□□□□ -1.32
LINC00939-201ENST00000502479 CDC42EP4Q9H3Q1 356 aaKnown RBP6.79□□□□□ -1.32
LINC00939-201ENST00000502479 DHX33Q9H6R0 707 aaKnown RBP6.79□□□□□ -1.32
LINC00939-201ENST00000502479 ADARB2Q9NS39 739 aaKnown RBP6.79□□□□□ -1.32
LINC00939-201ENST00000502479 ERAP1Q9NZ08 941 aa6.79□□□□□ -1.32
LINC00939-201ENST00000502479 HESX1Q9UBX0 185 aa6.79□□□□□ -1.32
LINC00939-201ENST00000502479 TNFSF13BQ9Y275 285 aa6.79□□□□□ -1.32
LINC00939-201ENST00000502479 NEU2Q9Y3R4 380 aa6.79□□□□□ -1.32
LINC00939-201ENST00000502479 A0A0G2JMZ2 1700 aa6.79□□□□□ -1.32
LINC00939-201ENST00000502479 ARHGEF37A1IGU5 675 aa6.79□□□□□ -1.32
LINC00939-201ENST00000502479 A6NJR5 290 aa6.79□□□□□ -1.32
LINC00939-201ENST00000502479 ZNF487B1APH4 448 aa6.79□□□□□ -1.32
LINC00939-201ENST00000502479 KRT19P08727 400 aa6.79□□□□□ -1.32
LINC00939-201ENST00000502479 VCPP55072 806 aaKnown RBP6.79□□□□□ -1.32
LINC00939-201ENST00000502479 JAG1P78504 1218 aa6.79□□□□□ -1.32
LINC00939-201ENST00000502479 PPIL2Q13356 520 aa6.79□□□□□ -1.32
LINC00939-201ENST00000502479 TTLL12Q14166 644 aaPredicted RBP6.79□□□□□ -1.32
LINC00939-201ENST00000502479 FAM187BQ17R55 369 aa6.79□□□□□ -1.32
LINC00939-201ENST00000502479 ICE2Q659A1 982 aa6.79□□□□□ -1.32
LINC00939-201ENST00000502479 HIBCHQ6NVY1 386 aaPredicted RBP6.79□□□□□ -1.32
LINC00939-201ENST00000502479 CCNJLQ8IV13 435 aa6.79□□□□□ -1.32
LINC00939-201ENST00000502479 SH2D3CQ8N5H7 860 aa6.79□□□□□ -1.32
LINC00939-201ENST00000502479 SPATA33Q96N06 139 aa6.79□□□□□ -1.32
LINC00939-201ENST00000502479 TGS1Q96RS0 853 aaKnown RBP6.79□□□□□ -1.32
LINC00939-201ENST00000502479 TBCBQ99426 244 aa6.79□□□□□ -1.32
LINC00939-201ENST00000502479 ACO2Q99798 780 aaKnown RBP6.79□□□□□ -1.32
LINC00939-201ENST00000502479 YY1AP1Q9H869 796 aa6.79□□□□□ -1.32
LINC00939-201ENST00000502479 PAK5Q9P286 719 aa6.79□□□□□ -1.32
LINC00939-201ENST00000502479 ZBTB12Q9Y330 459 aaPredicted RBP6.79□□□□□ -1.32
LINC00939-201ENST00000502479 APOL1O14791 398 aa6.79□□□□□ -1.32
LINC00939-201ENST00000502479 PSMD3O43242 534 aa6.79□□□□□ -1.32
LINC00939-201ENST00000502479 LIASO43766 372 aa6.79□□□□□ -1.32
LINC00939-201ENST00000502479 SEPT6Q14141 434 aa6.79□□□□□ -1.32
LINC00939-201ENST00000502479 TBC1D10BQ4KMP7 808 aaPredicted RBP6.79□□□□□ -1.32
LINC00939-201ENST00000502479 SESTD1Q86VW0 696 aa6.79□□□□□ -1.32
LINC00939-201ENST00000502479 PDIK1LQ8N165 341 aa6.79□□□□□ -1.32
LINC00939-201ENST00000502479 IL31RAQ8NI17 732 aa6.79□□□□□ -1.32
LINC00939-201ENST00000502479 RAB3IL1Q8TBN0 382 aa6.79□□□□□ -1.32
LINC00939-201ENST00000502479 C1orf54Q8WWF1 131 aa6.79□□□□□ -1.32
LINC00939-201ENST00000502479 DDX1Q92499 740 aaKnown RBP6.79□□□□□ -1.32
LINC00939-201ENST00000502479 ARHGEF2Q92974 986 aaKnown RBP6.79□□□□□ -1.32
LINC00939-201ENST00000502479 ZNF560Q96MR9 790 aa6.79□□□□□ -1.32
LINC00939-201ENST00000502479 VTA1Q9NP79 307 aa6.79□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 38.6 ms