RNA–Protein interactions for RNA: ENST00000502357.5

LMNA-218, Transcript of lamin A/C, humanhuman

TSL 4

Gene LMNA, Length 537 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMNA-218ENST00000502357 SPIRE2Q8WWL2 714 aa13.79□□□□□ -0.2
LMNA-218ENST00000502357 OXCT2Q9BYC2 517 aaPredicted RBP13.79□□□□□ -0.2
LMNA-218ENST00000502357 SMG9Q9H0W8 520 aaKnown RBP13.79□□□□□ -0.2
LMNA-218ENST00000502357 DUSP15Q9H1R2 295 aaPredicted RBP13.79□□□□□ -0.2
LMNA-218ENST00000502357 SLITRK6Q9H5Y7 841 aa13.79□□□□□ -0.2
LMNA-218ENST00000502357 KMT5AQ9NQR1 393 aa13.79□□□□□ -0.2
LMNA-218ENST00000502357 HSFX1Q9UBD0 423 aa13.79□□□□□ -0.2
LMNA-218ENST00000502357 LRWD1Q9UFC0 647 aa13.79□□□□□ -0.2
LMNA-218ENST00000502357 RBM19Q9Y4C8 960 aaKnown RBP13.79□□□□□ -0.2
LMNA-218ENST00000502357 ASB3Q9Y575 518 aa13.79□□□□□ -0.2
LMNA-218ENST00000502357 MYH11P35749 1972 aa13.79□□□□□ -0.2
LMNA-218ENST00000502357 ABCA7Q8IZY2 2146 aa13.78□□□□□ -0.2
LMNA-218ENST00000502357 RPP40O75818 363 aaKnown RBP13.78□□□□□ -0.2
LMNA-218ENST00000502357 AKAP3O75969 853 aa13.78□□□□□ -0.2
LMNA-218ENST00000502357 HOXB3P14651 431 aaPredicted RBP13.78□□□□□ -0.2
LMNA-218ENST00000502357 GUCY2CP25092 1073 aa13.78□□□□□ -0.2
LMNA-218ENST00000502357 GABRR2P28476 465 aa13.78□□□□□ -0.2
LMNA-218ENST00000502357 CDC25AP30304 524 aa13.78□□□□□ -0.2
LMNA-218ENST00000502357 EPHB3P54753 998 aa13.78□□□□□ -0.2
LMNA-218ENST00000502357 CYP4F8P98187 520 aa13.78□□□□□ -0.2
LMNA-218ENST00000502357 PLD1Q13393 1074 aa13.78□□□□□ -0.2
LMNA-218ENST00000502357 NOLC1Q14978 699 aaKnown RBP eCLIP13.78□□□□□ -0.2
LMNA-218ENST00000502357 PLK5Q496M5 336 aa13.78□□□□□ -0.2
LMNA-218ENST00000502357 TTC38Q5R3I4 469 aa13.78□□□□□ -0.2
LMNA-218ENST00000502357 GPR158Q5T848 1215 aa13.78□□□□□ -0.2
LMNA-218ENST00000502357 NAIF1Q69YI7 327 aaPredicted RBP13.78□□□□□ -0.2
LMNA-218ENST00000502357 IL31Q6EBC2 164 aa13.78□□□□□ -0.2
LMNA-218ENST00000502357 TCEAL6Q6IPX3 200 aa13.78□□□□□ -0.2
LMNA-218ENST00000502357 ZPBP2Q6X784 338 aa13.78□□□□□ -0.2
LMNA-218ENST00000502357 YAF2Q8IY57 180 aa13.78□□□□□ -0.2
LMNA-218ENST00000502357 TCEAL3Q969E4 200 aa13.78□□□□□ -0.2
LMNA-218ENST00000502357 LPIN3Q9BQK8 851 aa13.78□□□□□ -0.2
LMNA-218ENST00000502357 FOXP1Q9H334 677 aaPredicted RBP13.78□□□□□ -0.2
LMNA-218ENST00000502357 TASP1Q9H6P5 420 aa13.78□□□□□ -0.2
LMNA-218ENST00000502357 C17orf75Q9HAS0 396 aa13.78□□□□□ -0.2
LMNA-218ENST00000502357 PLEKHA5Q9HAU0 1116 aa13.78□□□□□ -0.2
LMNA-218ENST00000502357 PCDHGA5Q9Y5G8 931 aa13.78□□□□□ -0.2
LMNA-218ENST00000502357 ATRXP46100 2492 aa13.78□□□□□ -0.2
LMNA-218ENST00000502357 LACTBL1A8MY62 500 aa13.77□□□□□ -0.21
LMNA-218ENST00000502357 C1QTNF9BB2RNN3 333 aa13.77□□□□□ -0.21
LMNA-218ENST00000502357 GIPC1O14908 333 aa13.77□□□□□ -0.21
LMNA-218ENST00000502357 C1QTNF9P0C862 333 aa13.77□□□□□ -0.21
LMNA-218ENST00000502357 HARSP12081 509 aaKnown RBP13.77□□□□□ -0.21
LMNA-218ENST00000502357 PTPRDP23468 1912 aa13.77□□□□□ -0.21
LMNA-218ENST00000502357 MARCKSP29966 332 aaPredicted RBP13.77□□□□□ -0.21
LMNA-218ENST00000502357 LILRA4P59901 499 aa13.77□□□□□ -0.21
LMNA-218ENST00000502357 DMP1Q13316 513 aaPredicted RBP13.77□□□□□ -0.21
LMNA-218ENST00000502357 ITPRIPL2Q3MIP1 535 aa13.77□□□□□ -0.21
LMNA-218ENST00000502357 LRRTM3Q86VH5 581 aa13.77□□□□□ -0.21
LMNA-218ENST00000502357 WDFY3Q8IZQ1 3526 aa13.77□□□□□ -0.21
LMNA-218ENST00000502357 NUP205Q92621 2012 aa13.77□□□□□ -0.21
LMNA-218ENST00000502357 TCHPQ9BT92 498 aa13.77□□□□□ -0.21
LMNA-218ENST00000502357 ATXN3LQ9H3M9 355 aa13.77□□□□□ -0.21
LMNA-218ENST00000502357 GKN1Q9NS71 199 aa13.77□□□□□ -0.21
LMNA-218ENST00000502357 TBX20Q9UMR3 447 aa13.77□□□□□ -0.21
LMNA-218ENST00000502357 CCL26Q9Y258 94 aa13.77□□□□□ -0.21
LMNA-218ENST00000502357 ZFYVE26Q68DK2 2539 aa13.77□□□□□ -0.21
LMNA-218ENST00000502357 IGF2RP11717 2491 aa13.76□□□□□ -0.21
LMNA-218ENST00000502357 EGFP01133 1207 aa13.76□□□□□ -0.21
LMNA-218ENST00000502357 F11P03951 625 aa13.76□□□□□ -0.21
LMNA-218ENST00000502357 CYP11A1P05108 521 aa13.76□□□□□ -0.21
LMNA-218ENST00000502357 CLTAP09496 248 aa13.76□□□□□ -0.21
LMNA-218ENST00000502357 HMGA1P17096 107 aaKnown RBP13.76□□□□□ -0.21
LMNA-218ENST00000502357 MPLP40238 635 aa13.76□□□□□ -0.21
LMNA-218ENST00000502357 ALDH1A3P47895 512 aa13.76□□□□□ -0.21
LMNA-218ENST00000502357 MCM2P49736 904 aa13.76□□□□□ -0.21
LMNA-218ENST00000502357 PLCB2Q00722 1185 aa13.76□□□□□ -0.21
LMNA-218ENST00000502357 ENOX2Q16206 610 aaKnown RBP13.76□□□□□ -0.21
LMNA-218ENST00000502357 HYIQ5T013 277 aa13.76□□□□□ -0.21
LMNA-218ENST00000502357 SPATA1Q5VX52 437 aa13.76□□□□□ -0.21
LMNA-218ENST00000502357 TRIM68Q6AZZ1 485 aa13.76□□□□□ -0.21
LMNA-218ENST00000502357 OVOS1Q6IE37 1185 aa13.76□□□□□ -0.21
LMNA-218ENST00000502357 KDF1Q8NAX2 398 aaPredicted RBP13.76□□□□□ -0.21
LMNA-218ENST00000502357 FBXO18Q8NFZ0 1043 aa13.76□□□□□ -0.21
LMNA-218ENST00000502357 SNX29Q8TEQ0 813 aa13.76□□□□□ -0.21
LMNA-218ENST00000502357 USP13Q92995 863 aaPredicted RBP13.76□□□□□ -0.21
LMNA-218ENST00000502357 KIF12Q96FN5 646 aa13.76□□□□□ -0.21
LMNA-218ENST00000502357 DRC1Q96MC2 740 aa13.76□□□□□ -0.21
LMNA-218ENST00000502357 PNMA5Q96PV4 448 aa13.76□□□□□ -0.21
LMNA-218ENST00000502357 ANKFY1Q9P2R3 1169 aa13.76□□□□□ -0.21
LMNA-218ENST00000502357 UBQLN1Q9UMX0 589 aaKnown RBP13.76□□□□□ -0.21
LMNA-218ENST00000502357 PCDHB6Q9Y5E3 794 aa13.76□□□□□ -0.21
LMNA-218ENST00000502357 AKAP13Q12802 2813 aa13.75□□□□□ -0.21
LMNA-218ENST00000502357 ANO9A1A5B4 782 aa13.75□□□□□ -0.21
LMNA-218ENST00000502357 PIRO00625 290 aa13.75□□□□□ -0.21
LMNA-218ENST00000502357 PLS3P13797 630 aa13.75□□□□□ -0.21
LMNA-218ENST00000502357 TRAPPC10P48553 1259 aa13.75□□□□□ -0.21
LMNA-218ENST00000502357 CDR1P51861 262 aa13.75□□□□□ -0.21
LMNA-218ENST00000502357 NCKAP1LP55160 1127 aa13.75□□□□□ -0.21
LMNA-218ENST00000502357 RUNX3Q13761 415 aa13.75□□□□□ -0.21
LMNA-218ENST00000502357 TRIM29Q14134 588 aa13.75□□□□□ -0.21
LMNA-218ENST00000502357 ARSHQ5FYA8 562 aa13.75□□□□□ -0.21
LMNA-218ENST00000502357 CMTM8Q8IZV2 173 aa13.75□□□□□ -0.21
LMNA-218ENST00000502357 C12orf50Q8NA57 414 aaPredicted RBP13.75□□□□□ -0.21
LMNA-218ENST00000502357 LRRC15Q8TF66 581 aa13.75□□□□□ -0.21
LMNA-218ENST00000502357 SENP8Q96LD8 212 aa13.75□□□□□ -0.21
LMNA-218ENST00000502357 ZCWPW1Q9H0M4 648 aa13.75□□□□□ -0.21
LMNA-218ENST00000502357 VPS45Q9NRW7 570 aa13.75□□□□□ -0.21
LMNA-218ENST00000502357 ZMIZ1Q9ULJ6 1067 aa13.75□□□□□ -0.21
LMNA-218ENST00000502357 DNM3Q9UQ16 869 aa13.75□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 23.6 ms